RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 CTCFP49711 727 aaPredicted RBP9.95□□□□□ -0.82
SPTA1-204ENST00000467387 YTHDC1Q96MU7 727 aaKnown RBP9.95□□□□□ -0.82
SPTA1-204ENST00000467387 KIF7Q2M1P5 1343 aa9.95□□□□□ -0.82
SPTA1-204ENST00000467387 FER1L6Q2WGJ9 1857 aa9.95□□□□□ -0.82
SPTA1-204ENST00000467387 DICER1Q9UPY3 1922 aaKnown RBP9.95□□□□□ -0.82
SPTA1-204ENST00000467387 BCORQ6W2J9 1755 aa9.94□□□□□ -0.82
SPTA1-204ENST00000467387 ZNF541Q9H0D2 1346 aa9.94□□□□□ -0.82
SPTA1-204ENST00000467387 TMEM88BA6NKF7 163 aa9.94□□□□□ -0.82
SPTA1-204ENST00000467387 FAM177BA6PVY3 158 aa9.94□□□□□ -0.82
SPTA1-204ENST00000467387 BTBD11A6QL63 1104 aa9.94□□□□□ -0.82
SPTA1-204ENST00000467387 A1BGP04217 495 aa9.94□□□□□ -0.82
SPTA1-204ENST00000467387 GTF2E1P29083 439 aaPredicted RBP9.94□□□□□ -0.82
SPTA1-204ENST00000467387 PIP4K2AP48426 406 aaPredicted RBP9.94□□□□□ -0.82
SPTA1-204ENST00000467387 MMRN1Q13201 1228 aa9.94□□□□□ -0.82
SPTA1-204ENST00000467387 WNT2BQ93097 391 aa9.94□□□□□ -0.82
SPTA1-204ENST00000467387 TAF1DQ9H5J8 278 aaPredicted RBP9.94□□□□□ -0.82
SPTA1-204ENST00000467387 TMEM134Q9H6X4 195 aa9.94□□□□□ -0.82
SPTA1-204ENST00000467387 ZNF277Q9NRM2 450 aaPredicted RBP9.94□□□□□ -0.82
SPTA1-204ENST00000467387 HACL1Q9UJ83 578 aa9.94□□□□□ -0.82
SPTA1-204ENST00000467387 SLX4Q8IY92 1834 aa9.93□□□□□ -0.82
SPTA1-204ENST00000467387 COL3A1P02461 1466 aaPredicted RBP9.93□□□□□ -0.82
SPTA1-204ENST00000467387 GOLGA8CPA6NN73 597 aa9.93□□□□□ -0.82
SPTA1-204ENST00000467387 NPR1P16066 1061 aa9.93□□□□□ -0.82
SPTA1-204ENST00000467387 VEGFBP49765 207 aa9.93□□□□□ -0.82
SPTA1-204ENST00000467387 FKBP4Q02790 459 aaKnown RBP eCLIP9.93□□□□□ -0.82
SPTA1-204ENST00000467387 ANKK1Q8NFD2 765 aa9.93□□□□□ -0.82
SPTA1-204ENST00000467387 CFAP53Q96M91 514 aa9.93□□□□□ -0.82
SPTA1-204ENST00000467387 ABT1Q9ULW3 272 aaKnown RBP9.93□□□□□ -0.82
SPTA1-204ENST00000467387 ARFGEF2Q9Y6D5 1785 aa9.93□□□□□ -0.82
SPTA1-204ENST00000467387 RNF123Q5XPI4 1314 aa9.92□□□□□ -0.82
SPTA1-204ENST00000467387 PASKQ96RG2 1323 aa9.92□□□□□ -0.82
SPTA1-204ENST00000467387 PRKAR2BP31323 418 aa9.92□□□□□ -0.82
SPTA1-204ENST00000467387 EPHX2P34913 555 aa9.92□□□□□ -0.82
SPTA1-204ENST00000467387 SAMD7Q7Z3H4 446 aa9.92□□□□□ -0.82
SPTA1-204ENST00000467387 IL17REQ8NFR9 667 aa9.92□□□□□ -0.82
SPTA1-204ENST00000467387 RTF1Q92541 710 aaKnown RBP9.92□□□□□ -0.82
SPTA1-204ENST00000467387 RNF166Q96A37 237 aaPredicted RBP9.92□□□□□ -0.82
SPTA1-204ENST00000467387 PRDM10Q9NQV6 1147 aa9.92□□□□□ -0.82
SPTA1-204ENST00000467387 NIP7Q9Y221 180 aaKnown RBP eCLIP9.92□□□□□ -0.82
SPTA1-204ENST00000467387 SCN4AP35499 1836 aa9.91□□□□□ -0.82
SPTA1-204ENST00000467387 SIPA1L3O60292 1781 aaPredicted RBP9.91□□□□□ -0.82
SPTA1-204ENST00000467387 TRIM66O15016 1216 aa9.91□□□□□ -0.82
SPTA1-204ENST00000467387 KCNQ3O43525 872 aa9.91□□□□□ -0.82
SPTA1-204ENST00000467387 LMOD1P29536 600 aaPredicted RBP9.91□□□□□ -0.82
SPTA1-204ENST00000467387 LBX1P52954 281 aa9.91□□□□□ -0.82
SPTA1-204ENST00000467387 GRM1Q13255 1194 aa9.91□□□□□ -0.82
SPTA1-204ENST00000467387 SWT1Q5T5J6 900 aaKnown RBP9.91□□□□□ -0.82
SPTA1-204ENST00000467387 MAP1SQ66K74 1059 aaPredicted RBP9.91□□□□□ -0.82
SPTA1-204ENST00000467387 TPTE2Q6XPS3 522 aa9.91□□□□□ -0.82
SPTA1-204ENST00000467387 PNMA8AQ86V59 439 aaPredicted RBP9.91□□□□□ -0.82
SPTA1-204ENST00000467387 RTKN2Q8IZC4 609 aa9.91□□□□□ -0.82
SPTA1-204ENST00000467387 NLRP7Q8WX94 980 aa9.91□□□□□ -0.82
SPTA1-204ENST00000467387 JDP2Q8WYK2 163 aa9.91□□□□□ -0.82
SPTA1-204ENST00000467387 KCTD12Q96CX2 325 aaKnown RBP9.91□□□□□ -0.82
SPTA1-204ENST00000467387 GJA3Q9Y6H8 435 aa9.91□□□□□ -0.82
SPTA1-204ENST00000467387 CEMIPQ8WUJ3 1361 aa9.9□□□□□ -0.82
SPTA1-204ENST00000467387 SOWAHBA6NEL2 793 aa9.9□□□□□ -0.82
SPTA1-204ENST00000467387 SNRPA1P09661 255 aaKnown RBP9.9□□□□□ -0.82
SPTA1-204ENST00000467387 PRKCSHP14314 528 aaPredicted RBP9.9□□□□□ -0.82
SPTA1-204ENST00000467387 IARSP41252 1262 aaKnown RBP9.9□□□□□ -0.82
SPTA1-204ENST00000467387 AMHR2Q16671 573 aa9.9□□□□□ -0.82
SPTA1-204ENST00000467387 OLFM4Q6UX06 510 aa9.9□□□□□ -0.82
SPTA1-204ENST00000467387 CLEC4GQ6UXB4 293 aa9.9□□□□□ -0.82
SPTA1-204ENST00000467387 THSD4Q6ZMP0 1018 aa9.9□□□□□ -0.82
SPTA1-204ENST00000467387 RPGRQ92834 1020 aaKnown RBP9.9□□□□□ -0.82
SPTA1-204ENST00000467387 LRCH3Q96II8 777 aa9.9□□□□□ -0.82
SPTA1-204ENST00000467387 BEGAINQ9BUH8 593 aa9.9□□□□□ -0.82
SPTA1-204ENST00000467387 PRAMEF22A3QJZ6 481 aa9.89□□□□□ -0.83
SPTA1-204ENST00000467387 BCAMP50895 628 aa9.89□□□□□ -0.83
SPTA1-204ENST00000467387 EIF6P56537 245 aaKnown RBP9.89□□□□□ -0.83
SPTA1-204ENST00000467387 MCM10Q7L590 875 aa9.89□□□□□ -0.83
SPTA1-204ENST00000467387 GPC2Q8N158 579 aa9.89□□□□□ -0.83
SPTA1-204ENST00000467387 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.89□□□□□ -0.83
SPTA1-204ENST00000467387 NUDCQ9Y266 331 aa9.89□□□□□ -0.83
SPTA1-204ENST00000467387 U2AF1L5P0DN76 240 aaPredicted RBP9.88□□□□□ -0.83
SPTA1-204ENST00000467387 ALDH1B1P30837 517 aa9.88□□□□□ -0.83
SPTA1-204ENST00000467387 U2AF1Q01081 240 aaKnown RBP eCLIP9.88□□□□□ -0.83
SPTA1-204ENST00000467387 MAP2K1Q02750 393 aaPredicted RBP9.88□□□□□ -0.83
SPTA1-204ENST00000467387 DEFB115Q30KQ5 88 aa9.88□□□□□ -0.83
SPTA1-204ENST00000467387 CNTROBQ8N137 903 aa9.88□□□□□ -0.83
SPTA1-204ENST00000467387 SYNE4Q8N205 404 aa9.88□□□□□ -0.83
SPTA1-204ENST00000467387 NGEFQ8N5V2 710 aa9.88□□□□□ -0.83
SPTA1-204ENST00000467387 C7orf43Q8WVR3 580 aa9.88□□□□□ -0.83
SPTA1-204ENST00000467387 PHACTR3Q96KR7 559 aa9.88□□□□□ -0.83
SPTA1-204ENST00000467387 USP16Q9Y5T5 823 aa9.88□□□□□ -0.83
SPTA1-204ENST00000467387 WDR33Q9C0J8 1336 aaKnown RBP9.87□□□□□ -0.83
SPTA1-204ENST00000467387 RASSF10A6NK89 507 aa9.87□□□□□ -0.83
SPTA1-204ENST00000467387 ITGBL1O95965 494 aaPredicted RBP9.87□□□□□ -0.83
SPTA1-204ENST00000467387 HSPA8P11142 646 aaKnown RBP9.87□□□□□ -0.83
SPTA1-204ENST00000467387 MDM2Q00987 491 aaPredicted RBP9.87□□□□□ -0.83
SPTA1-204ENST00000467387 KIF6Q6ZMV9 814 aa9.87□□□□□ -0.83
SPTA1-204ENST00000467387 LARGE2Q8N3Y3 721 aa9.87□□□□□ -0.83
SPTA1-204ENST00000467387 ABHD8Q96I13 439 aa9.87□□□□□ -0.83
SPTA1-204ENST00000467387 TMUB1Q9BVT8 246 aa9.87□□□□□ -0.83
SPTA1-204ENST00000467387 NYXQ9GZU5 481 aa9.87□□□□□ -0.83
SPTA1-204ENST00000467387 RSPH6AQ9H0K4 717 aa9.87□□□□□ -0.83
SPTA1-204ENST00000467387 TMX4Q9H1E5 349 aaPredicted RBP9.87□□□□□ -0.83
SPTA1-204ENST00000467387 WBP1LQ9NX94 342 aa9.87□□□□□ -0.83
SPTA1-204ENST00000467387 ABCC12Q96J65 1359 aa9.87□□□□□ -0.83
SPTA1-204ENST00000467387 FZD9O00144 591 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms