RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 PPEF1O14829 653 aaPredicted RBP18.25■□□□□ 0.51
DDX56-208ENST00000467318 IL15P40933 162 aaPredicted RBP18.25■□□□□ 0.51
DDX56-208ENST00000467318 DALRD3Q5D0E6 543 aaKnown RBP18.25■□□□□ 0.51
DDX56-208ENST00000467318 SP8Q8IXZ3 490 aa18.25■□□□□ 0.51
DDX56-208ENST00000467318 SIL1Q9H173 461 aa18.25■□□□□ 0.51
DDX56-208ENST00000467318 RIPOR2Q9Y4F9 1068 aa18.25■□□□□ 0.51
DDX56-208ENST00000467318 CC2D2BQ6DHV5 1058 aa18.25■□□□□ 0.51
DDX56-208ENST00000467318 GCC1Q96CN9 775 aa18.25■□□□□ 0.51
DDX56-208ENST00000467318 ATP6V0A2Q9Y487 856 aa18.25■□□□□ 0.51
DDX56-208ENST00000467318 MROH5Q6ZUA9 1318 aa18.24■□□□□ 0.51
DDX56-208ENST00000467318 RAB11FIP3O75154 756 aa18.24■□□□□ 0.51
DDX56-208ENST00000467318 LRRC24Q50LG9 513 aa18.24■□□□□ 0.51
DDX56-208ENST00000467318 ERC1Q8IUD2 1116 aa18.24■□□□□ 0.51
DDX56-208ENST00000467318 PUS3Q9BZE2 481 aaKnown RBP18.24■□□□□ 0.51
DDX56-208ENST00000467318 MINPP1Q9UNW1 487 aa18.24■□□□□ 0.51
DDX56-208ENST00000467318 IGHDP01880 384 aa18.23■□□□□ 0.51
DDX56-208ENST00000467318 OS9Q13438 667 aaPredicted RBP18.23■□□□□ 0.51
DDX56-208ENST00000467318 GRIPAP1Q4V328 841 aa18.23■□□□□ 0.51
DDX56-208ENST00000467318 ERICH6Q7L0X2 663 aa18.23■□□□□ 0.51
DDX56-208ENST00000467318 ATG9AQ7Z3C6 839 aa18.23■□□□□ 0.51
DDX56-208ENST00000467318 EXOC6BQ9Y2D4 811 aa18.23■□□□□ 0.51
DDX56-208ENST00000467318 CACNA1SQ13698 1873 aa18.23■□□□□ 0.51
DDX56-208ENST00000467318 SOGA3Q5TF21 947 aa18.22■□□□□ 0.51
DDX56-208ENST00000467318 C7orf43Q8WVR3 580 aa18.22■□□□□ 0.51
DDX56-208ENST00000467318 ANKRD2Q9GZV1 360 aa18.22■□□□□ 0.51
DDX56-208ENST00000467318 UTRNP46939 3433 aa18.22■□□□□ 0.51
DDX56-208ENST00000467318 CHRNDQ07001 517 aa18.22■□□□□ 0.51
DDX56-208ENST00000467318 METTL24Q5JXM2 366 aa18.22■□□□□ 0.51
DDX56-208ENST00000467318 OLFM4Q6UX06 510 aa18.22■□□□□ 0.51
DDX56-208ENST00000467318 SMC5Q8IY18 1101 aa18.22■□□□□ 0.51
DDX56-208ENST00000467318 CEP126Q9P2H0 1117 aa18.22■□□□□ 0.51
DDX56-208ENST00000467318 BRCA1P38398 1863 aaKnown RBP18.21■□□□□ 0.51
DDX56-208ENST00000467318 SLX4Q8IY92 1834 aa18.21■□□□□ 0.51
DDX56-208ENST00000467318 KIF1BPQ96EK5 621 aa18.21■□□□□ 0.51
DDX56-208ENST00000467318 BCS1LQ9Y276 419 aa18.21■□□□□ 0.51
DDX56-208ENST00000467318 PODXL2Q9NZ53 605 aa18.2■□□□□ 0.5
DDX56-208ENST00000467318 ZNF219Q9P2Y4 722 aaPredicted RBP18.2■□□□□ 0.5
DDX56-208ENST00000467318 SPEF2Q9C093 1822 aa18.19■□□□□ 0.5
DDX56-208ENST00000467318 C21orf2O43822 256 aa18.19■□□□□ 0.5
DDX56-208ENST00000467318 SASH1O94885 1247 aa18.19■□□□□ 0.5
DDX56-208ENST00000467318 PDE8BO95263 885 aa18.19■□□□□ 0.5
DDX56-208ENST00000467318 RHPN1Q8TCX5 695 aa18.19■□□□□ 0.5
DDX56-208ENST00000467318 ANKIB1Q9P2G1 1089 aa18.19■□□□□ 0.5
DDX56-208ENST00000467318 NSFL1CQ9UNZ2 370 aaKnown RBP18.19■□□□□ 0.5
DDX56-208ENST00000467318 XDHP47989 1333 aa18.19■□□□□ 0.5
DDX56-208ENST00000467318 CCDC93Q567U6 631 aa18.18■□□□□ 0.5
DDX56-208ENST00000467318 CENPQQ7L2Z9 268 aaPredicted RBP18.18■□□□□ 0.5
DDX56-208ENST00000467318 RTKN2Q8IZC4 609 aa18.18■□□□□ 0.5
DDX56-208ENST00000467318 VGLL2Q8N8G2 317 aa18.18■□□□□ 0.5
DDX56-208ENST00000467318 LRRCC1Q9C099 1032 aa18.18■□□□□ 0.5
DDX56-208ENST00000467318 AKAP2Q9Y2D5 859 aa18.18■□□□□ 0.5
DDX56-208ENST00000467318 MPNDQ8N594 471 aa18.18■□□□□ 0.5
DDX56-208ENST00000467318 GPR108Q9NPR9 543 aa18.18■□□□□ 0.5
DDX56-208ENST00000467318 LEMD3Q9Y2U8 911 aa18.18■□□□□ 0.5
DDX56-208ENST00000467318 LRRC37AA6NMS7 1700 aa18.17■□□□□ 0.5
DDX56-208ENST00000467318 TFCP2Q12800 502 aa18.17■□□□□ 0.5
DDX56-208ENST00000467318 UBE4AQ14139 1066 aa18.17■□□□□ 0.5
DDX56-208ENST00000467318 ZBTB47Q9UFB7 747 aaPredicted RBP18.17■□□□□ 0.5
DDX56-208ENST00000467318 KDM2BQ8NHM5 1336 aa18.17■□□□□ 0.5
DDX56-208ENST00000467318 APBB1O00213 710 aa18.16■□□□□ 0.5
DDX56-208ENST00000467318 TAF5LO75529 589 aa18.16■□□□□ 0.5
DDX56-208ENST00000467318 ATP2B4P23634 1241 aa18.16■□□□□ 0.5
DDX56-208ENST00000467318 GPSM2P81274 684 aa18.16■□□□□ 0.5
DDX56-208ENST00000467318 DPP8Q6V1X1 898 aaPredicted RBP18.16■□□□□ 0.5
DDX56-208ENST00000467318 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
DDX56-208ENST00000467318 HELBQ8NG08 1087 aaPredicted RBP18.16■□□□□ 0.5
DDX56-208ENST00000467318 GGA1Q9UJY5 639 aa18.16■□□□□ 0.5
DDX56-208ENST00000467318 PUM3Q15397 648 aaKnown RBP18.15■□□□□ 0.5
DDX56-208ENST00000467318 KCNJ4P48050 445 aa18.15■□□□□ 0.5
DDX56-208ENST00000467318 ANKRD45Q5TZF3 282 aa18.15■□□□□ 0.5
DDX56-208ENST00000467318 LPIN2Q92539 896 aa18.15■□□□□ 0.5
DDX56-208ENST00000467318 RTFDC1Q9BY42 306 aaPredicted RBP18.15■□□□□ 0.5
DDX56-208ENST00000467318 ZNF804BA4D1E1 1349 aa18.14■□□□□ 0.49
DDX56-208ENST00000467318 ARFGEF1Q9Y6D6 1849 aa18.14■□□□□ 0.49
DDX56-208ENST00000467318 SUPT20HQ8NEM7 779 aa18.14■□□□□ 0.49
DDX56-208ENST00000467318 TBC1D16Q8TBP0 767 aa18.14■□□□□ 0.49
DDX56-208ENST00000467318 PSMD1Q99460 953 aa18.14■□□□□ 0.49
DDX56-208ENST00000467318 SNED1Q8TER0 1413 aa18.14■□□□□ 0.49
DDX56-208ENST00000467318 WTIPA6NIX2 430 aaPredicted RBP18.13■□□□□ 0.49
DDX56-208ENST00000467318 UFL1O94874 794 aa18.13■□□□□ 0.49
DDX56-208ENST00000467318 IFIT1P09914 478 aaKnown RBP18.13■□□□□ 0.49
DDX56-208ENST00000467318 YBX3P16989 372 aaKnown RBP eCLIP18.13■□□□□ 0.49
DDX56-208ENST00000467318 FGFR2P21802 821 aa18.13■□□□□ 0.49
DDX56-208ENST00000467318 ATP2B3Q16720 1220 aa18.13■□□□□ 0.49
DDX56-208ENST00000467318 TNNI3KQ59H18 835 aa18.13■□□□□ 0.49
DDX56-208ENST00000467318 IL1RAPL2Q9NP60 686 aa18.13■□□□□ 0.49
DDX56-208ENST00000467318 FPGT-TNNI3KV9GXZ4 949 aa18.13■□□□□ 0.49
DDX56-208ENST00000467318 A0A1B0GUL7 405 aa18.12■□□□□ 0.49
DDX56-208ENST00000467318 C6orf229H3BNL8 230 aa18.12■□□□□ 0.49
DDX56-208ENST00000467318 SLC5A1P13866 664 aa18.12■□□□□ 0.49
DDX56-208ENST00000467318 NUCB1Q02818 461 aa18.12■□□□□ 0.49
DDX56-208ENST00000467318 POLLQ9UGP5 575 aa18.12■□□□□ 0.49
DDX56-208ENST00000467318 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.12■□□□□ 0.49
DDX56-208ENST00000467318 ANP32AP39687 249 aaKnown RBP18.12■□□□□ 0.49
DDX56-208ENST00000467318 FKBP4Q02790 459 aaKnown RBP eCLIP18.12■□□□□ 0.49
DDX56-208ENST00000467318 CHD1LQ86WJ1 897 aa18.12■□□□□ 0.49
DDX56-208ENST00000467318 EYA3Q99504 573 aa18.12■□□□□ 0.49
DDX56-208ENST00000467318 VPS33BQ9H267 617 aa18.12■□□□□ 0.49
DDX56-208ENST00000467318 TIMM10P62072 90 aa18.11■□□□□ 0.49
DDX56-208ENST00000467318 C15orf52Q6ZUT6 534 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms