RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 RIC3Q7Z5B4 369 aa8.4□□□□□ -1.06
UBXN4-205ENST00000467065 MYD88Q99836 296 aa8.4□□□□□ -1.06
UBXN4-205ENST00000467065 ATP6V0A2Q9Y487 856 aa8.4□□□□□ -1.06
UBXN4-205ENST00000467065 POLR2AP24928 1970 aaKnown RBP8.4□□□□□ -1.06
UBXN4-205ENST00000467065 FANCIQ9NVI1 1328 aa8.39□□□□□ -1.07
UBXN4-205ENST00000467065 PPIP5K2O43314 1243 aa8.39□□□□□ -1.07
UBXN4-205ENST00000467065 DDX58O95786 925 aaKnown RBP8.39□□□□□ -1.07
UBXN4-205ENST00000467065 SLFN5Q08AF3 891 aa8.39□□□□□ -1.07
UBXN4-205ENST00000467065 GRAPQ13588 217 aa8.39□□□□□ -1.07
UBXN4-205ENST00000467065 AOC3Q16853 763 aa8.39□□□□□ -1.07
UBXN4-205ENST00000467065 TWISTNBQ3B726 338 aaPredicted RBP8.39□□□□□ -1.07
UBXN4-205ENST00000467065 DDX46Q7L014 1031 aaKnown RBP8.39□□□□□ -1.07
UBXN4-205ENST00000467065 LARGE2Q8N3Y3 721 aa8.39□□□□□ -1.07
UBXN4-205ENST00000467065 GRAPLQ8TC17 118 aaPredicted RBP8.39□□□□□ -1.07
UBXN4-205ENST00000467065 JDP2Q8WYK2 163 aa8.39□□□□□ -1.07
UBXN4-205ENST00000467065 FAM212AQ96EL1 285 aa8.39□□□□□ -1.07
UBXN4-205ENST00000467065 L3MBTL3Q96JM7 780 aaPredicted RBP8.39□□□□□ -1.07
UBXN4-205ENST00000467065 TMEM121BQ9BXQ6 578 aaPredicted RBP8.39□□□□□ -1.07
UBXN4-205ENST00000467065 ZNF646O15015 1829 aaPredicted RBP8.38□□□□□ -1.07
UBXN4-205ENST00000467065 IQCA1LA6NCM1 817 aa8.38□□□□□ -1.07
UBXN4-205ENST00000467065 FZD9O00144 591 aa8.38□□□□□ -1.07
UBXN4-205ENST00000467065 IRS4O14654 1257 aaPredicted RBP8.38□□□□□ -1.07
UBXN4-205ENST00000467065 NEFLP07196 543 aa8.38□□□□□ -1.07
UBXN4-205ENST00000467065 EIF6P56537 245 aaKnown RBP8.38□□□□□ -1.07
UBXN4-205ENST00000467065 GRIPAP1Q4V328 841 aa8.38□□□□□ -1.07
UBXN4-205ENST00000467065 EAPPQ56P03 285 aaPredicted RBP8.38□□□□□ -1.07
UBXN4-205ENST00000467065 DNAJC5GQ8N7S2 189 aa8.38□□□□□ -1.07
UBXN4-205ENST00000467065 JARID2Q92833 1246 aaPredicted RBP8.38□□□□□ -1.07
UBXN4-205ENST00000467065 CELF1Q92879 486 aaKnown RBP8.38□□□□□ -1.07
UBXN4-205ENST00000467065 TMX4Q9H1E5 349 aaPredicted RBP8.38□□□□□ -1.07
UBXN4-205ENST00000467065 TAF1DQ9H5J8 278 aaPredicted RBP8.38□□□□□ -1.07
UBXN4-205ENST00000467065 GJA3Q9Y6H8 435 aa8.38□□□□□ -1.07
UBXN4-205ENST00000467065 BBOX1O75936 387 aa8.37□□□□□ -1.07
UBXN4-205ENST00000467065 EXOSC9Q06265 439 aaKnown RBP8.37□□□□□ -1.07
UBXN4-205ENST00000467065 MMRN1Q13201 1228 aa8.37□□□□□ -1.07
UBXN4-205ENST00000467065 TRIM28Q13263 835 aaKnown RBP8.37□□□□□ -1.07
UBXN4-205ENST00000467065 DPP8Q6V1X1 898 aaPredicted RBP8.37□□□□□ -1.07
UBXN4-205ENST00000467065 G2E3Q7L622 706 aa8.37□□□□□ -1.07
UBXN4-205ENST00000467065 SP8Q8IXZ3 490 aa8.37□□□□□ -1.07
UBXN4-205ENST00000467065 NIM1KQ8IY84 436 aa8.37□□□□□ -1.07
UBXN4-205ENST00000467065 GPC2Q8N158 579 aa8.37□□□□□ -1.07
UBXN4-205ENST00000467065 MPNDQ8N594 471 aa8.37□□□□□ -1.07
UBXN4-205ENST00000467065 METTL22Q9BUU2 404 aaPredicted RBP8.37□□□□□ -1.07
UBXN4-205ENST00000467065 CHMP4BQ9H444 224 aaKnown RBP8.37□□□□□ -1.07
UBXN4-205ENST00000467065 OCEL1Q9H607 264 aa8.37□□□□□ -1.07
UBXN4-205ENST00000467065 HACL1Q9UJ83 578 aa8.37□□□□□ -1.07
UBXN4-205ENST00000467065 MAP3K2Q9Y2U5 619 aa8.37□□□□□ -1.07
UBXN4-205ENST00000467065 PI4KAP2A4QPH2 592 aa8.36□□□□□ -1.07
UBXN4-205ENST00000467065 PCCAP05165 728 aaPredicted RBP8.36□□□□□ -1.07
UBXN4-205ENST00000467065 EPHX2P34913 555 aa8.36□□□□□ -1.07
UBXN4-205ENST00000467065 SF3B3Q15393 1217 aaKnown RBP8.36□□□□□ -1.07
UBXN4-205ENST00000467065 LDHDQ86WU2 507 aa8.36□□□□□ -1.07
UBXN4-205ENST00000467065 SPNS2Q8IVW8 549 aa8.36□□□□□ -1.07
UBXN4-205ENST00000467065 PI4KAP1Q8N8J0 262 aa8.36□□□□□ -1.07
UBXN4-205ENST00000467065 ZBTB38Q8NAP3 1195 aaPredicted RBP8.36□□□□□ -1.07
UBXN4-205ENST00000467065 CCDC191Q8NCU4 936 aa8.36□□□□□ -1.07
UBXN4-205ENST00000467065 SUPT20HQ8NEM7 779 aa8.36□□□□□ -1.07
UBXN4-205ENST00000467065 KLRG1Q96E93 195 aa8.36□□□□□ -1.07
UBXN4-205ENST00000467065 CDCA7LQ96GN5 454 aa8.36□□□□□ -1.07
UBXN4-205ENST00000467065 CCDC85AQ96PX6 553 aaPredicted RBP8.36□□□□□ -1.07
UBXN4-205ENST00000467065 RTFDC1Q9BY42 306 aaPredicted RBP8.36□□□□□ -1.07
UBXN4-205ENST00000467065 SEC31BQ9NQW1 1179 aa8.36□□□□□ -1.07
UBXN4-205ENST00000467065 SMC4Q9NTJ3 1288 aa8.36□□□□□ -1.07
UBXN4-205ENST00000467065 CWC25Q9NXE8 425 aaPredicted RBP8.36□□□□□ -1.07
UBXN4-205ENST00000467065 IGKV5-2P06315 115 aa8.35□□□□□ -1.07
UBXN4-205ENST00000467065 LMOD1P29536 600 aaPredicted RBP8.35□□□□□ -1.07
UBXN4-205ENST00000467065 SCNN1DP51172 638 aa8.35□□□□□ -1.07
UBXN4-205ENST00000467065 NEXNQ0ZGT2 675 aa8.35□□□□□ -1.07
UBXN4-205ENST00000467065 CWF19L2Q2TBE0 894 aaKnown RBP8.35□□□□□ -1.07
UBXN4-205ENST00000467065 KSR2Q6VAB6 950 aa8.35□□□□□ -1.07
UBXN4-205ENST00000467065 FTSJ3Q8IY81 847 aaKnown RBP8.35□□□□□ -1.07
UBXN4-205ENST00000467065 FRAT1Q92837 279 aaPredicted RBP8.35□□□□□ -1.07
UBXN4-205ENST00000467065 RCAN3Q9UKA8 241 aa8.35□□□□□ -1.07
UBXN4-205ENST00000467065 HDAC5Q9UQL6 1122 aa8.35□□□□□ -1.07
UBXN4-205ENST00000467065 CDHR2Q9BYE9 1310 aa8.34□□□□□ -1.07
UBXN4-205ENST00000467065 NEURL1BA8MQ27 555 aa8.34□□□□□ -1.07
UBXN4-205ENST00000467065 PDE8AO60658 829 aa8.34□□□□□ -1.07
UBXN4-205ENST00000467065 EPS15P42566 896 aa8.34□□□□□ -1.07
UBXN4-205ENST00000467065 GPSM2P81274 684 aa8.34□□□□□ -1.07
UBXN4-205ENST00000467065 CXCL9Q07325 125 aa8.34□□□□□ -1.07
UBXN4-205ENST00000467065 KIAA2012Q0VF49 1180 aa8.34□□□□□ -1.07
UBXN4-205ENST00000467065 FLIIQ13045 1269 aa8.34□□□□□ -1.07
UBXN4-205ENST00000467065 FKBP5Q13451 457 aaPredicted RBP8.34□□□□□ -1.07
UBXN4-205ENST00000467065 ALDH1L2Q3SY69 923 aa8.34□□□□□ -1.07
UBXN4-205ENST00000467065 TMC4Q7Z404 712 aa8.34□□□□□ -1.07
UBXN4-205ENST00000467065 GPR101Q96P66 508 aaPredicted RBP8.34□□□□□ -1.07
UBXN4-205ENST00000467065 NSFL1CQ9UNZ2 370 aaKnown RBP8.34□□□□□ -1.07
UBXN4-205ENST00000467065 PASKQ96RG2 1323 aa8.33□□□□□ -1.08
UBXN4-205ENST00000467065 YDJCA8MPS7 323 aa8.33□□□□□ -1.08
UBXN4-205ENST00000467065 C6orf229H3BNL8 230 aa8.33□□□□□ -1.08
UBXN4-205ENST00000467065 RIMBP2O15034 1052 aa8.33□□□□□ -1.08
UBXN4-205ENST00000467065 VAMP4O75379 141 aa8.33□□□□□ -1.08
UBXN4-205ENST00000467065 RAD17O75943 681 aa8.33□□□□□ -1.08
UBXN4-205ENST00000467065 HSP90B1P14625 803 aaKnown RBP8.33□□□□□ -1.08
UBXN4-205ENST00000467065 GMPSP49915 693 aaPredicted RBP8.33□□□□□ -1.08
UBXN4-205ENST00000467065 CTSWP56202 376 aa8.33□□□□□ -1.08
UBXN4-205ENST00000467065 RPS8P62241 208 aaKnown RBP8.33□□□□□ -1.08
UBXN4-205ENST00000467065 CCDC152Q4G0S7 254 aa8.33□□□□□ -1.08
UBXN4-205ENST00000467065 MAP1SQ66K74 1059 aaPredicted RBP8.33□□□□□ -1.08
UBXN4-205ENST00000467065 UBE3BQ7Z3V4 1068 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms