RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 RPS8P62241 208 aaKnown RBP16.44■□□□□ 0.22
PDCD11-202ENST00000466959 HSP90AB4PQ58FF6 505 aa16.44■□□□□ 0.22
PDCD11-202ENST00000466959 ZNF622Q969S3 477 aaKnown RBP eCLIP16.44■□□□□ 0.22
PDCD11-202ENST00000466959 SIL1Q9H173 461 aa16.44■□□□□ 0.22
PDCD11-202ENST00000466959 SLX4Q8IY92 1834 aa16.43■□□□□ 0.22
PDCD11-202ENST00000466959 EYA2O00167 538 aa16.43■□□□□ 0.22
PDCD11-202ENST00000466959 LDHAL6AQ6ZMR3 332 aa16.43■□□□□ 0.22
PDCD11-202ENST00000466959 C16orf71Q8IYS4 520 aaPredicted RBP16.43■□□□□ 0.22
PDCD11-202ENST00000466959 CNKSR1Q969H4 720 aa16.43■□□□□ 0.22
PDCD11-202ENST00000466959 GCC1Q96CN9 775 aa16.43■□□□□ 0.22
PDCD11-202ENST00000466959 MPHOSPH8Q99549 860 aa16.43■□□□□ 0.22
PDCD11-202ENST00000466959 EXOC6BQ9Y2D4 811 aa16.43■□□□□ 0.22
PDCD11-202ENST00000466959 A0A0G2JLW4 131 aa16.42■□□□□ 0.22
PDCD11-202ENST00000466959 BBOX1O75936 387 aa16.42■□□□□ 0.22
PDCD11-202ENST00000466959 KCNA3P22001 575 aa16.42■□□□□ 0.22
PDCD11-202ENST00000466959 G3BP1Q13283 466 aaKnown RBP eCLIP16.42■□□□□ 0.22
PDCD11-202ENST00000466959 B4GALNT3Q6L9W6 998 aa16.42■□□□□ 0.22
PDCD11-202ENST00000466959 TMC4Q7Z404 712 aa16.42■□□□□ 0.22
PDCD11-202ENST00000466959 SMC5Q8IY18 1101 aa16.42■□□□□ 0.22
PDCD11-202ENST00000466959 PUS3Q9BZE2 481 aaKnown RBP16.42■□□□□ 0.22
PDCD11-202ENST00000466959 CNNM1Q9NRU3 951 aa16.42■□□□□ 0.22
PDCD11-202ENST00000466959 BSDC1Q9NW68 430 aaPredicted RBP16.42■□□□□ 0.22
PDCD11-202ENST00000466959 KDM2BQ8NHM5 1336 aa16.42■□□□□ 0.22
PDCD11-202ENST00000466959 PPEF1O14829 653 aaPredicted RBP16.41■□□□□ 0.22
PDCD11-202ENST00000466959 RAB11FIP3O75154 756 aa16.41■□□□□ 0.22
PDCD11-202ENST00000466959 CAPN15O75808 1086 aa16.41■□□□□ 0.22
PDCD11-202ENST00000466959 IL15P40933 162 aaPredicted RBP16.41■□□□□ 0.22
PDCD11-202ENST00000466959 OS9Q13438 667 aaPredicted RBP16.41■□□□□ 0.22
PDCD11-202ENST00000466959 LRRC24Q50LG9 513 aa16.41■□□□□ 0.22
PDCD11-202ENST00000466959 CENPQQ7L2Z9 268 aaPredicted RBP16.41■□□□□ 0.22
PDCD11-202ENST00000466959 ATG9AQ7Z3C6 839 aa16.41■□□□□ 0.22
PDCD11-202ENST00000466959 RIPOR2Q9Y4F9 1068 aa16.41■□□□□ 0.22
PDCD11-202ENST00000466959 PRPF40BQ6NWY9 871 aaKnown RBP16.4■□□□□ 0.22
PDCD11-202ENST00000466959 ERC1Q8IUD2 1116 aa16.4■□□□□ 0.22
PDCD11-202ENST00000466959 DNAJC5GQ8N7S2 189 aa16.4■□□□□ 0.22
PDCD11-202ENST00000466959 TTLL6Q8N841 843 aa16.4■□□□□ 0.22
PDCD11-202ENST00000466959 MROH5Q6ZUA9 1318 aa16.4■□□□□ 0.22
PDCD11-202ENST00000466959 PIM2Q9P1W9 311 aa16.39■□□□□ 0.21
PDCD11-202ENST00000466959 LTBP1Q14766 1721 aa16.39■□□□□ 0.21
PDCD11-202ENST00000466959 ARFGEF1Q9Y6D6 1849 aa16.38■□□□□ 0.21
PDCD11-202ENST00000466959 SASH1O94885 1247 aa16.38■□□□□ 0.21
PDCD11-202ENST00000466959 METTL24Q5JXM2 366 aa16.38■□□□□ 0.21
PDCD11-202ENST00000466959 SP8Q8IXZ3 490 aa16.38■□□□□ 0.21
PDCD11-202ENST00000466959 KIF1BPQ96EK5 621 aa16.38■□□□□ 0.21
PDCD11-202ENST00000466959 MINPP1Q9UNW1 487 aa16.38■□□□□ 0.21
PDCD11-202ENST00000466959 ATP6V0A2Q9Y487 856 aa16.38■□□□□ 0.21
PDCD11-202ENST00000466959 ARAP2Q8WZ64 1704 aa16.37■□□□□ 0.21
PDCD11-202ENST00000466959 APBB1O00213 710 aa16.37■□□□□ 0.21
PDCD11-202ENST00000466959 CHRNDQ07001 517 aa16.37■□□□□ 0.21
PDCD11-202ENST00000466959 TNS4Q8IZW8 715 aa16.37■□□□□ 0.21
PDCD11-202ENST00000466959 RBM46Q8TBY0 533 aaKnown RBP16.37■□□□□ 0.21
PDCD11-202ENST00000466959 RHPN1Q8TCX5 695 aa16.37■□□□□ 0.21
PDCD11-202ENST00000466959 KLRG1Q96E93 195 aa16.37■□□□□ 0.21
PDCD11-202ENST00000466959 LRRCC1Q9C099 1032 aa16.37■□□□□ 0.21
PDCD11-202ENST00000466959 CEP126Q9P2H0 1117 aa16.37■□□□□ 0.21
PDCD11-202ENST00000466959 BCS1LQ9Y276 419 aa16.37■□□□□ 0.21
PDCD11-202ENST00000466959 TFCP2Q12800 502 aa16.36■□□□□ 0.21
PDCD11-202ENST00000466959 DALRD3Q5D0E6 543 aaKnown RBP16.36■□□□□ 0.21
PDCD11-202ENST00000466959 VGLL2Q8N8G2 317 aa16.36■□□□□ 0.21
PDCD11-202ENST00000466959 ANKRD2Q9GZV1 360 aa16.36■□□□□ 0.21
PDCD11-202ENST00000466959 NUCB1Q02818 461 aa16.35■□□□□ 0.21
PDCD11-202ENST00000466959 COL13A1Q5TAT6 717 aaPredicted RBP16.35■□□□□ 0.21
PDCD11-202ENST00000466959 ANKRD45Q5TZF3 282 aa16.35■□□□□ 0.21
PDCD11-202ENST00000466959 CC2D2BQ6DHV5 1058 aa16.35■□□□□ 0.21
PDCD11-202ENST00000466959 ARHGAP27Q6ZUM4 889 aa16.35■□□□□ 0.21
PDCD11-202ENST00000466959 SLC51AQ86UW1 340 aa16.35■□□□□ 0.21
PDCD11-202ENST00000466959 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
PDCD11-202ENST00000466959 TMX4Q9H1E5 349 aaPredicted RBP16.35■□□□□ 0.21
PDCD11-202ENST00000466959 NMRK2Q9NPI5 230 aa16.35■□□□□ 0.21
PDCD11-202ENST00000466959 GPR108Q9NPR9 543 aa16.35■□□□□ 0.21
PDCD11-202ENST00000466959 ZNF609O15014 1411 aa16.35■□□□□ 0.21
PDCD11-202ENST00000466959 PDE8BO95263 885 aa16.34■□□□□ 0.21
PDCD11-202ENST00000466959 FSTL1Q12841 308 aa16.34■□□□□ 0.21
PDCD11-202ENST00000466959 HELBQ8NG08 1087 aaPredicted RBP16.34■□□□□ 0.21
PDCD11-202ENST00000466959 ZBTB47Q9UFB7 747 aaPredicted RBP16.34■□□□□ 0.21
PDCD11-202ENST00000466959 AKAP2Q9Y2D5 859 aa16.34■□□□□ 0.21
PDCD11-202ENST00000466959 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.34■□□□□ 0.21
PDCD11-202ENST00000466959 XDHP47989 1333 aa16.34■□□□□ 0.21
PDCD11-202ENST00000466959 SNED1Q8TER0 1413 aa16.34■□□□□ 0.21
PDCD11-202ENST00000466959 DUOX1Q9NRD9 1551 aa16.34■□□□□ 0.21
PDCD11-202ENST00000466959 SMARCA5O60264 1052 aaPredicted RBP16.33■□□□□ 0.2
PDCD11-202ENST00000466959 TAF5LO75529 589 aa16.33■□□□□ 0.2
PDCD11-202ENST00000466959 GPSM2P81274 684 aa16.33■□□□□ 0.2
PDCD11-202ENST00000466959 SOGA3Q5TF21 947 aa16.33■□□□□ 0.2
PDCD11-202ENST00000466959 IL1RAPL2Q9NP60 686 aa16.33■□□□□ 0.2
PDCD11-202ENST00000466959 PODXL2Q9NZ53 605 aa16.33■□□□□ 0.2
PDCD11-202ENST00000466959 FER1L6Q2WGJ9 1857 aa16.33■□□□□ 0.2
PDCD11-202ENST00000466959 C21orf2O43822 256 aa16.32■□□□□ 0.2
PDCD11-202ENST00000466959 PRELPP51888 382 aa16.32■□□□□ 0.2
PDCD11-202ENST00000466959 UBE4AQ14139 1066 aa16.32■□□□□ 0.2
PDCD11-202ENST00000466959 PUM3Q15397 648 aaKnown RBP16.32■□□□□ 0.2
PDCD11-202ENST00000466959 ATP2B3Q16720 1220 aa16.32■□□□□ 0.2
PDCD11-202ENST00000466959 GRIPAP1Q4V328 841 aa16.32■□□□□ 0.2
PDCD11-202ENST00000466959 CCDC93Q567U6 631 aa16.32■□□□□ 0.2
PDCD11-202ENST00000466959 TNNI3KQ59H18 835 aa16.32■□□□□ 0.2
PDCD11-202ENST00000466959 OLFM4Q6UX06 510 aa16.32■□□□□ 0.2
PDCD11-202ENST00000466959 CHD1LQ86WJ1 897 aa16.32■□□□□ 0.2
PDCD11-202ENST00000466959 CLASRPQ8N2M8 674 aaKnown RBP16.32■□□□□ 0.2
PDCD11-202ENST00000466959 JMYQ8N9B5 988 aa16.32■□□□□ 0.2
PDCD11-202ENST00000466959 ANKIB1Q9P2G1 1089 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms