RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 NUDT8Q8WV74 236 aa8.13□□□□□ -1.11
LRCH3-212ENST00000466845 USTQ9Y2C2 406 aa8.13□□□□□ -1.11
LRCH3-212ENST00000466845 CPB1P15086 417 aa8.12□□□□□ -1.11
LRCH3-212ENST00000466845 GATA4P43694 442 aa8.12□□□□□ -1.11
LRCH3-212ENST00000466845 BAG6P46379 1132 aa8.12□□□□□ -1.11
LRCH3-212ENST00000466845 NRG1Q02297 640 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-212ENST00000466845 MSL1Q68DK7 614 aa8.12□□□□□ -1.11
LRCH3-212ENST00000466845 C8orf86Q6ZUL3 223 aa8.12□□□□□ -1.11
LRCH3-212ENST00000466845 RGS22Q8NE09 1264 aa8.12□□□□□ -1.11
LRCH3-212ENST00000466845 LPIN3Q9BQK8 851 aa8.12□□□□□ -1.11
LRCH3-212ENST00000466845 SLAIN2Q9P270 581 aa8.12□□□□□ -1.11
LRCH3-212ENST00000466845 A0A0A0MRY4 1105 aa8.11□□□□□ -1.11
LRCH3-212ENST00000466845 MMP20O60882 483 aa8.11□□□□□ -1.11
LRCH3-212ENST00000466845 GHRHP01286 108 aa8.11□□□□□ -1.11
LRCH3-212ENST00000466845 CHRNA4P43681 627 aa8.11□□□□□ -1.11
LRCH3-212ENST00000466845 SUZ12Q15022 739 aaKnown RBP8.11□□□□□ -1.11
LRCH3-212ENST00000466845 PERM1Q5SV97 790 aa8.11□□□□□ -1.11
LRCH3-212ENST00000466845 TTC39BQ5VTQ0 682 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-212ENST00000466845 PDE12Q6L8Q7 609 aaKnown RBP8.11□□□□□ -1.11
LRCH3-212ENST00000466845 CAPN12Q6ZSI9 719 aa8.11□□□□□ -1.11
LRCH3-212ENST00000466845 SRA1Q9HD15 236 aaKnown RBP8.11□□□□□ -1.11
LRCH3-212ENST00000466845 NAGPAQ9UK23 515 aa8.11□□□□□ -1.11
LRCH3-212ENST00000466845 CENPBP07199 599 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-212ENST00000466845 NOM1Q5C9Z4 860 aaKnown RBP8.1□□□□□ -1.11
LRCH3-212ENST00000466845 WFDC8Q8IUA0 241 aa8.1□□□□□ -1.11
LRCH3-212ENST00000466845 TTC16Q8NEE8 873 aa8.1□□□□□ -1.11
LRCH3-212ENST00000466845 OR13H1Q8NG92 308 aa8.1□□□□□ -1.11
LRCH3-212ENST00000466845 USP20Q9Y2K6 914 aa8.1□□□□□ -1.11
LRCH3-212ENST00000466845 NACADO15069 1562 aa8.1□□□□□ -1.11
LRCH3-212ENST00000466845 EIF2AK2P19525 551 aaKnown RBP8.09□□□□□ -1.11
LRCH3-212ENST00000466845 HYAL2Q12891 473 aa8.09□□□□□ -1.11
LRCH3-212ENST00000466845 XKR5Q6UX68 686 aa8.09□□□□□ -1.11
LRCH3-212ENST00000466845 GPR152Q8TDT2 470 aa8.09□□□□□ -1.11
LRCH3-212ENST00000466845 LENG1Q96BZ8 264 aaPredicted RBP8.09□□□□□ -1.11
LRCH3-212ENST00000466845 CCDC136Q96JN2 1154 aa8.09□□□□□ -1.11
LRCH3-212ENST00000466845 SPACA7Q96KW9 195 aa8.09□□□□□ -1.11
LRCH3-212ENST00000466845 MUC3BQ9H195 1237 aa8.09□□□□□ -1.11
LRCH3-212ENST00000466845 SEPT3Q9UH03 358 aa8.09□□□□□ -1.11
LRCH3-212ENST00000466845 ADAM23O75077 832 aa8.08□□□□□ -1.12
LRCH3-212ENST00000466845 SF3B2Q13435 895 aaKnown RBP8.08□□□□□ -1.12
LRCH3-212ENST00000466845 GRIK5Q16478 980 aa8.08□□□□□ -1.12
LRCH3-212ENST00000466845 MAP4K3Q8IVH8 894 aa8.08□□□□□ -1.12
LRCH3-212ENST00000466845 FMR1NBQ8N0W7 255 aaPredicted RBP8.08□□□□□ -1.12
LRCH3-212ENST00000466845 PMEPA1Q969W9 287 aa8.08□□□□□ -1.12
LRCH3-212ENST00000466845 SMG9Q9H0W8 520 aaKnown RBP8.08□□□□□ -1.12
LRCH3-212ENST00000466845 ABI2Q9NYB9 513 aaPredicted RBP8.08□□□□□ -1.12
LRCH3-212ENST00000466845 BRPF3Q9ULD4 1205 aa8.08□□□□□ -1.12
LRCH3-212ENST00000466845 K7ELQ4 463 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-212ENST00000466845 FAM13AO94988 1023 aa8.07□□□□□ -1.12
LRCH3-212ENST00000466845 NPR3P17342 541 aa8.07□□□□□ -1.12
LRCH3-212ENST00000466845 MZF1P28698 734 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-212ENST00000466845 IRX6P78412 446 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-212ENST00000466845 TRIP4Q15650 581 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-212ENST00000466845 FBXO11Q86XK2 927 aa8.07□□□□□ -1.12
LRCH3-212ENST00000466845 DMRTC2Q8IXT2 367 aaPredicted RBP8.07□□□□□ -1.12
LRCH3-212ENST00000466845 ZNF428Q96B54 188 aa8.07□□□□□ -1.12
LRCH3-212ENST00000466845 PLD4Q96BZ4 506 aa8.07□□□□□ -1.12
LRCH3-212ENST00000466845 ZBTB39O15060 712 aa8.06□□□□□ -1.12
LRCH3-212ENST00000466845 ZEB1P37275 1124 aaPredicted RBP8.06□□□□□ -1.12
LRCH3-212ENST00000466845 USP5P45974 858 aa8.06□□□□□ -1.12
LRCH3-212ENST00000466845 MLLT1Q03111 559 aaPredicted RBP8.06□□□□□ -1.12
LRCH3-212ENST00000466845 AAMPQ13685 434 aa8.06□□□□□ -1.12
LRCH3-212ENST00000466845 FAM26DQ5JW98 314 aa8.06□□□□□ -1.12
LRCH3-212ENST00000466845 GTF3C2Q8WUA4 911 aaPredicted RBP8.06□□□□□ -1.12
LRCH3-212ENST00000466845 CLSTN1O94985 981 aa8.05□□□□□ -1.12
LRCH3-212ENST00000466845 EHHADHQ08426 723 aa8.05□□□□□ -1.12
LRCH3-212ENST00000466845 ADGRE1Q14246 886 aa8.05□□□□□ -1.12
LRCH3-212ENST00000466845 GRIK4Q16099 956 aa8.05□□□□□ -1.12
LRCH3-212ENST00000466845 IGF2-ASQ6U949 168 aa8.05□□□□□ -1.12
LRCH3-212ENST00000466845 HFE2Q6ZVN8 426 aa8.05□□□□□ -1.12
LRCH3-212ENST00000466845 NUDT16Q96DE0 195 aaKnown RBP8.05□□□□□ -1.12
LRCH3-212ENST00000466845 FAM229AH3BQW9 127 aa8.04□□□□□ -1.12
LRCH3-212ENST00000466845 KIF4AO95239 1232 aa8.04□□□□□ -1.12
LRCH3-212ENST00000466845 SCNN1AP37088 669 aa8.04□□□□□ -1.12
LRCH3-212ENST00000466845 FKBP4Q02790 459 aaKnown RBP eCLIP8.04□□□□□ -1.12
LRCH3-212ENST00000466845 ELP3Q9H9T3 547 aa8.04□□□□□ -1.12
LRCH3-212ENST00000466845 J3QW42 95 aa8.03□□□□□ -1.12
LRCH3-212ENST00000466845 SMNDC1O75940 238 aaKnown RBP eCLIP8.03□□□□□ -1.12
LRCH3-212ENST00000466845 SELPP16109 830 aa8.03□□□□□ -1.12
LRCH3-212ENST00000466845 EIF1AXP47813 144 aaKnown RBP8.03□□□□□ -1.12
LRCH3-212ENST00000466845 ZNF438Q7Z4V0 828 aa8.03□□□□□ -1.12
LRCH3-212ENST00000466845 TXNRD3Q86VQ6 643 aa8.03□□□□□ -1.12
LRCH3-212ENST00000466845 NAP1L5Q96NT1 182 aaPredicted RBP8.03□□□□□ -1.12
LRCH3-212ENST00000466845 NSUN5Q96P11 429 aaKnown RBP8.03□□□□□ -1.12
LRCH3-212ENST00000466845 EGFL7Q9UHF1 273 aa8.03□□□□□ -1.12
LRCH3-212ENST00000466845 FAM177A1Q8N128 213 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-212ENST00000466845 EDEM1Q92611 657 aa8.02□□□□□ -1.13
LRCH3-212ENST00000466845 PSMD1Q99460 953 aa8.02□□□□□ -1.13
LRCH3-212ENST00000466845 FAM177BA6PVY3 158 aa8.01□□□□□ -1.13
LRCH3-212ENST00000466845 PDGFAP04085 211 aa8.01□□□□□ -1.13
LRCH3-212ENST00000466845 RBM25P49756 843 aaKnown RBP8.01□□□□□ -1.13
LRCH3-212ENST00000466845 DNM1Q05193 864 aaKnown RBP8.01□□□□□ -1.13
LRCH3-212ENST00000466845 CERS3Q8IU89 383 aa8.01□□□□□ -1.13
LRCH3-212ENST00000466845 IL22RA1Q8N6P7 574 aa8.01□□□□□ -1.13
LRCH3-212ENST00000466845 PPME1Q9Y570 386 aa8.01□□□□□ -1.13
LRCH3-212ENST00000466845 FURINP09958 794 aa8□□□□□ -1.13
LRCH3-212ENST00000466845 MPSTP25325 297 aa8□□□□□ -1.13
LRCH3-212ENST00000466845 DOC2BQ14184 412 aa8□□□□□ -1.13
LRCH3-212ENST00000466845 MBTPS1Q14703 1052 aa8□□□□□ -1.13
LRCH3-212ENST00000466845 PHLDB3Q6NSJ2 640 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms