RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 ZAP70P43403 619 aa8.32□□□□□ -1.08
CHMP2B-202ENST00000466696 FAM26DQ5JW98 314 aa8.32□□□□□ -1.08
CHMP2B-202ENST00000466696 CACTIN-AS1Q8N1I8 211 aa8.32□□□□□ -1.08
CHMP2B-202ENST00000466696 ABTB2Q8N961 1025 aa8.32□□□□□ -1.08
CHMP2B-202ENST00000466696 DCAF11Q8TEB1 546 aa8.32□□□□□ -1.08
CHMP2B-202ENST00000466696 WFDC12Q8WWY7 111 aa8.32□□□□□ -1.08
CHMP2B-202ENST00000466696 SSBP4Q9BWG4 385 aaPredicted RBP8.32□□□□□ -1.08
CHMP2B-202ENST00000466696 SRA1Q9HD15 236 aaKnown RBP8.32□□□□□ -1.08
CHMP2B-202ENST00000466696 DEAF1O75398 565 aaPredicted RBP8.31□□□□□ -1.08
CHMP2B-202ENST00000466696 GDF6Q6KF10 455 aaPredicted RBP8.31□□□□□ -1.08
CHMP2B-202ENST00000466696 IL22RA1Q8N6P7 574 aa8.31□□□□□ -1.08
CHMP2B-202ENST00000466696 OR13H1Q8NG92 308 aa8.31□□□□□ -1.08
CHMP2B-202ENST00000466696 DLL1O00548 723 aa8.3□□□□□ -1.08
CHMP2B-202ENST00000466696 ATP2B4P23634 1241 aa8.3□□□□□ -1.08
CHMP2B-202ENST00000466696 IREB2P48200 963 aaKnown RBP8.3□□□□□ -1.08
CHMP2B-202ENST00000466696 MAP4K3Q8IVH8 894 aa8.3□□□□□ -1.08
CHMP2B-202ENST00000466696 SCO2A0A1W2PP80 73 aa8.29□□□□□ -1.08
CHMP2B-202ENST00000466696 NOS3P29474 1203 aa8.29□□□□□ -1.08
CHMP2B-202ENST00000466696 HYAL2Q12891 473 aa8.29□□□□□ -1.08
CHMP2B-202ENST00000466696 TTC39BQ5VTQ0 682 aaPredicted RBP8.29□□□□□ -1.08
CHMP2B-202ENST00000466696 GPR152Q8TDT2 470 aa8.29□□□□□ -1.08
CHMP2B-202ENST00000466696 SPACA7Q96KW9 195 aa8.29□□□□□ -1.08
CHMP2B-202ENST00000466696 MUC3BQ9H195 1237 aa8.29□□□□□ -1.08
CHMP2B-202ENST00000466696 MRPL18Q9H0U6 180 aaKnown RBP8.28□□□□□ -1.08
CHMP2B-202ENST00000466696 FOXD4L6Q3SYB3 417 aaPredicted RBP8.27□□□□□ -1.09
CHMP2B-202ENST00000466696 FOXD4L3Q6VB84 417 aaPredicted RBP8.27□□□□□ -1.09
CHMP2B-202ENST00000466696 TRIM33Q9UPN9 1127 aa8.27□□□□□ -1.09
CHMP2B-202ENST00000466696 ZBTB39O15060 712 aa8.26□□□□□ -1.09
CHMP2B-202ENST00000466696 SMNDC1O75940 238 aaKnown RBP eCLIP8.26□□□□□ -1.09
CHMP2B-202ENST00000466696 SCNN1AP37088 669 aa8.26□□□□□ -1.09
CHMP2B-202ENST00000466696 TMEM130Q8N3G9 435 aa8.26□□□□□ -1.09
CHMP2B-202ENST00000466696 AKTIPQ9H8T0 292 aa8.26□□□□□ -1.09
CHMP2B-202ENST00000466696 ABI2Q9NYB9 513 aaPredicted RBP8.26□□□□□ -1.09
CHMP2B-202ENST00000466696 SLAIN2Q9P270 581 aa8.26□□□□□ -1.09
CHMP2B-202ENST00000466696 PPME1Q9Y570 386 aa8.26□□□□□ -1.09
CHMP2B-202ENST00000466696 RPLP1P05386 114 aaKnown RBP8.25□□□□□ -1.09
CHMP2B-202ENST00000466696 SETDB1Q15047 1291 aa8.25□□□□□ -1.09
CHMP2B-202ENST00000466696 COL13A1Q5TAT6 717 aaPredicted RBP8.25□□□□□ -1.09
CHMP2B-202ENST00000466696 PDE12Q6L8Q7 609 aaKnown RBP8.25□□□□□ -1.09
CHMP2B-202ENST00000466696 MEGF10Q96KG7 1140 aa8.25□□□□□ -1.09
CHMP2B-202ENST00000466696 SEPT3Q9UH03 358 aa8.25□□□□□ -1.09
CHMP2B-202ENST00000466696 KIF4AO95239 1232 aa8.24□□□□□ -1.09
CHMP2B-202ENST00000466696 ARTNQ5T4W7 220 aa8.24□□□□□ -1.09
CHMP2B-202ENST00000466696 CEP135Q66GS9 1140 aa8.24□□□□□ -1.09
CHMP2B-202ENST00000466696 ZFP64Q9NPA5 681 aa8.24□□□□□ -1.09
CHMP2B-202ENST00000466696 ARID3CA6NKF2 412 aa8.23□□□□□ -1.09
CHMP2B-202ENST00000466696 F8W735 103 aaPredicted RBP8.23□□□□□ -1.09
CHMP2B-202ENST00000466696 DZIP1LQ8IYY4 767 aaKnown RBP8.23□□□□□ -1.09
CHMP2B-202ENST00000466696 HELQQ8TDG4 1101 aa8.23□□□□□ -1.09
CHMP2B-202ENST00000466696 NUDT16Q96DE0 195 aaKnown RBP8.23□□□□□ -1.09
CHMP2B-202ENST00000466696 ELP3Q9H9T3 547 aa8.23□□□□□ -1.09
CHMP2B-202ENST00000466696 PCSK2P16519 638 aa8.22□□□□□ -1.09
CHMP2B-202ENST00000466696 ATP11AP98196 1134 aa8.22□□□□□ -1.09
CHMP2B-202ENST00000466696 NCAPG2Q86XI2 1143 aa8.22□□□□□ -1.09
CHMP2B-202ENST00000466696 ALX3O95076 343 aa8.21□□□□□ -1.1
CHMP2B-202ENST00000466696 CDC27P30260 824 aa8.21□□□□□ -1.1
CHMP2B-202ENST00000466696 PRR23CQ6ZRP0 262 aa8.21□□□□□ -1.1
CHMP2B-202ENST00000466696 ZNF438Q7Z4V0 828 aa8.21□□□□□ -1.1
CHMP2B-202ENST00000466696 PBX4Q9BYU1 374 aa8.21□□□□□ -1.1
CHMP2B-202ENST00000466696 LACRTQ9GZZ8 138 aa8.21□□□□□ -1.1
CHMP2B-202ENST00000466696 RASSF4Q9H2L5 321 aa8.21□□□□□ -1.1
CHMP2B-202ENST00000466696 GTF3C3Q9Y5Q9 886 aa8.21□□□□□ -1.1
CHMP2B-202ENST00000466696 FAM177BA6PVY3 158 aa8.2□□□□□ -1.1
CHMP2B-202ENST00000466696 LINC01387J3KSC0 135 aa8.2□□□□□ -1.1
CHMP2B-202ENST00000466696 LRP8Q14114 963 aa8.2□□□□□ -1.1
CHMP2B-202ENST00000466696 ATCAYQ86WG3 371 aa8.2□□□□□ -1.1
CHMP2B-202ENST00000466696 CEP120Q8N960 986 aa8.2□□□□□ -1.1
CHMP2B-202ENST00000466696 TTC16Q8NEE8 873 aa8.2□□□□□ -1.1
CHMP2B-202ENST00000466696 TMEM63CQ9P1W3 806 aa8.2□□□□□ -1.1
CHMP2B-202ENST00000466696 PPP1R15AO75807 674 aaPredicted RBP8.19□□□□□ -1.1
CHMP2B-202ENST00000466696 CYP2E1P05181 493 aaPredicted RBP8.19□□□□□ -1.1
CHMP2B-202ENST00000466696 NOM1Q5C9Z4 860 aaKnown RBP8.19□□□□□ -1.1
CHMP2B-202ENST00000466696 FAM117BQ6P1L5 589 aa8.19□□□□□ -1.1
CHMP2B-202ENST00000466696 XKR5Q6UX68 686 aa8.19□□□□□ -1.1
CHMP2B-202ENST00000466696 Q6ZS46 218 aa8.19□□□□□ -1.1
CHMP2B-202ENST00000466696 SLC51AQ86UW1 340 aa8.19□□□□□ -1.1
CHMP2B-202ENST00000466696 GLB1P16278 677 aa8.18□□□□□ -1.1
CHMP2B-202ENST00000466696 PTPRAP18433 802 aa8.18□□□□□ -1.1
CHMP2B-202ENST00000466696 CD68P34810 354 aaPredicted RBP8.18□□□□□ -1.1
CHMP2B-202ENST00000466696 DNM1Q05193 864 aaKnown RBP8.18□□□□□ -1.1
CHMP2B-202ENST00000466696 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.18□□□□□ -1.1
CHMP2B-202ENST00000466696 NBPF11Q86T75 865 aa8.18□□□□□ -1.1
CHMP2B-202ENST00000466696 CCDC82Q8N4S0 544 aa8.18□□□□□ -1.1
CHMP2B-202ENST00000466696 GALNT11Q8NCW6 608 aa8.18□□□□□ -1.1
CHMP2B-202ENST00000466696 EDEM1Q92611 657 aa8.18□□□□□ -1.1
CHMP2B-202ENST00000466696 MZF1P28698 734 aaPredicted RBP8.17□□□□□ -1.1
CHMP2B-202ENST00000466696 KLHL23Q8NBE8 558 aa8.17□□□□□ -1.1
CHMP2B-202ENST00000466696 PMEPA1Q969W9 287 aa8.17□□□□□ -1.1
CHMP2B-202ENST00000466696 RNF112Q9ULX5 631 aa8.17□□□□□ -1.1
CHMP2B-202ENST00000466696 FSCN2O14926 492 aa8.16□□□□□ -1.1
CHMP2B-202ENST00000466696 PDGFAP04085 211 aa8.16□□□□□ -1.1
CHMP2B-202ENST00000466696 CES1P23141 567 aa8.16□□□□□ -1.1
CHMP2B-202ENST00000466696 SSFA2P28290 1259 aa8.16□□□□□ -1.1
CHMP2B-202ENST00000466696 C8orf34Q49A92 452 aa8.16□□□□□ -1.1
CHMP2B-202ENST00000466696 ALKBH2Q6NS38 261 aa8.16□□□□□ -1.1
CHMP2B-202ENST00000466696 TXNDC11Q6PKC3 985 aa8.16□□□□□ -1.1
CHMP2B-202ENST00000466696 AGGF1Q8N302 714 aaeCLIP8.16□□□□□ -1.1
CHMP2B-202ENST00000466696 GTF3C2Q8WUA4 911 aaPredicted RBP8.16□□□□□ -1.1
CHMP2B-202ENST00000466696 POP1Q99575 1024 aaKnown RBP8.16□□□□□ -1.1
CHMP2B-202ENST00000466696 ADAM19Q9H013 955 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms