RNA–Protein interactions for RNA: ENST00000466635.1

SYP-203, Transcript of synaptophysin, humanhuman

TSL 4

Gene SYP, Length 513 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-203ENST00000466635 MYH3P11055 1940 aa16.71■□□□□ 0.27
SYP-203ENST00000466635 EYA2O00167 538 aa16.71■□□□□ 0.27
SYP-203ENST00000466635 KLHDC4Q8TBB5 520 aa16.71■□□□□ 0.27
SYP-203ENST00000466635 XDHP47989 1333 aa16.7■□□□□ 0.26
SYP-203ENST00000466635 MROH5Q6ZUA9 1318 aa16.7■□□□□ 0.26
SYP-203ENST00000466635 CIAO1O76071 339 aa16.7■□□□□ 0.26
SYP-203ENST00000466635 GPSM2P81274 684 aa16.7■□□□□ 0.26
SYP-203ENST00000466635 G3BP1Q13283 466 aaKnown RBP eCLIP16.7■□□□□ 0.26
SYP-203ENST00000466635 SUPT20HQ8NEM7 779 aa16.7■□□□□ 0.26
SYP-203ENST00000466635 PUS3Q9BZE2 481 aaKnown RBP16.7■□□□□ 0.26
SYP-203ENST00000466635 SIL1Q9H173 461 aa16.7■□□□□ 0.26
SYP-203ENST00000466635 TAOK3Q9H2K8 898 aa16.7■□□□□ 0.26
SYP-203ENST00000466635 PODXL2Q9NZ53 605 aa16.7■□□□□ 0.26
SYP-203ENST00000466635 PA2G4Q9UQ80 394 aaKnown RBP16.7■□□□□ 0.26
SYP-203ENST00000466635 SLX4Q8IY92 1834 aa16.7■□□□□ 0.26
SYP-203ENST00000466635 IL15P40933 162 aaPredicted RBP16.69■□□□□ 0.26
SYP-203ENST00000466635 FKBP4Q02790 459 aaKnown RBP eCLIP16.69■□□□□ 0.26
SYP-203ENST00000466635 CHRNDQ07001 517 aa16.69■□□□□ 0.26
SYP-203ENST00000466635 METTL24Q5JXM2 366 aa16.69■□□□□ 0.26
SYP-203ENST00000466635 PSMD1Q99460 953 aa16.69■□□□□ 0.26
SYP-203ENST00000466635 GGA1Q9UJY5 639 aa16.69■□□□□ 0.26
SYP-203ENST00000466635 RIPOR2Q9Y4F9 1068 aa16.69■□□□□ 0.26
SYP-203ENST00000466635 BRCA1P38398 1863 aaKnown RBP16.68■□□□□ 0.26
SYP-203ENST00000466635 C6orf229H3BNL8 230 aa16.68■□□□□ 0.26
SYP-203ENST00000466635 SURF6O75683 361 aaKnown RBP16.68■□□□□ 0.26
SYP-203ENST00000466635 ATP2B4P23634 1241 aa16.68■□□□□ 0.26
SYP-203ENST00000466635 KCNJ4P48050 445 aa16.68■□□□□ 0.26
SYP-203ENST00000466635 OS9Q13438 667 aaPredicted RBP16.68■□□□□ 0.26
SYP-203ENST00000466635 LRRC24Q50LG9 513 aa16.68■□□□□ 0.26
SYP-203ENST00000466635 LEMD3Q9Y2U8 911 aa16.68■□□□□ 0.26
SYP-203ENST00000466635 LTBP3Q9NS15 1303 aa16.68■□□□□ 0.26
SYP-203ENST00000466635 NFKBIEO00221 500 aa16.67■□□□□ 0.26
SYP-203ENST00000466635 HSP90AB4PQ58FF6 505 aa16.67■□□□□ 0.26
SYP-203ENST00000466635 SLC51AQ86UW1 340 aa16.67■□□□□ 0.26
SYP-203ENST00000466635 SIRT2Q8IXJ6 389 aa16.67■□□□□ 0.26
SYP-203ENST00000466635 EYA3Q99504 573 aa16.67■□□□□ 0.26
SYP-203ENST00000466635 RTFDC1Q9BY42 306 aaPredicted RBP16.67■□□□□ 0.26
SYP-203ENST00000466635 VPS33BQ9H267 617 aa16.67■□□□□ 0.26
SYP-203ENST00000466635 CEP126Q9P2H0 1117 aa16.67■□□□□ 0.26
SYP-203ENST00000466635 PCDHB15Q9Y5E8 787 aa16.67■□□□□ 0.26
SYP-203ENST00000466635 COL4A1P02462 1669 aa16.66■□□□□ 0.26
SYP-203ENST00000466635 UFL1O94874 794 aa16.66■□□□□ 0.26
SYP-203ENST00000466635 ATG9AQ7Z3C6 839 aa16.66■□□□□ 0.26
SYP-203ENST00000466635 HELBQ8NG08 1087 aaPredicted RBP16.66■□□□□ 0.26
SYP-203ENST00000466635 TBC1D16Q8TBP0 767 aa16.66■□□□□ 0.26
SYP-203ENST00000466635 NOP58Q9Y2X3 529 aaKnown RBP16.66■□□□□ 0.26
SYP-203ENST00000466635 TAF5LO75529 589 aa16.65■□□□□ 0.26
SYP-203ENST00000466635 PDE8BO95263 885 aa16.65■□□□□ 0.26
SYP-203ENST00000466635 LMNB1P20700 586 aa16.65■□□□□ 0.26
SYP-203ENST00000466635 RASSF7Q02833 373 aa16.65■□□□□ 0.26
SYP-203ENST00000466635 ERC1Q8IUD2 1116 aa16.65■□□□□ 0.26
SYP-203ENST00000466635 ZNF277Q9NRM2 450 aaPredicted RBP16.65■□□□□ 0.26
SYP-203ENST00000466635 POLLQ9UGP5 575 aa16.65■□□□□ 0.26
SYP-203ENST00000466635 ZNF804BA4D1E1 1349 aa16.65■□□□□ 0.26
SYP-203ENST00000466635 ARFGEF1Q9Y6D6 1849 aa16.64■□□□□ 0.25
SYP-203ENST00000466635 WASHC4Q2M389 1173 aa16.64■□□□□ 0.25
SYP-203ENST00000466635 ZC3H12CQ9C0D7 883 aaKnown RBP16.64■□□□□ 0.25
SYP-203ENST00000466635 SNED1Q8TER0 1413 aa16.63■□□□□ 0.25
SYP-203ENST00000466635 TAF1P21675 1872 aa16.63■□□□□ 0.25
SYP-203ENST00000466635 PPIP5K2O43314 1243 aa16.63■□□□□ 0.25
SYP-203ENST00000466635 RAB11FIP3O75154 756 aa16.63■□□□□ 0.25
SYP-203ENST00000466635 IARSP41252 1262 aaKnown RBP16.63■□□□□ 0.25
SYP-203ENST00000466635 UBE4AQ14139 1066 aa16.63■□□□□ 0.25
SYP-203ENST00000466635 PUM3Q15397 648 aaKnown RBP16.63■□□□□ 0.25
SYP-203ENST00000466635 RWDD1Q9H446 243 aaPredicted RBP16.63■□□□□ 0.25
SYP-203ENST00000466635 EXOC6BQ9Y2D4 811 aa16.63■□□□□ 0.25
SYP-203ENST00000466635 AKAP2Q9Y2D5 859 aa16.63■□□□□ 0.25
SYP-203ENST00000466635 CACNA1SQ13698 1873 aa16.63■□□□□ 0.25
SYP-203ENST00000466635 G3V3G9 751 aa16.62■□□□□ 0.25
SYP-203ENST00000466635 TFCP2Q12800 502 aa16.62■□□□□ 0.25
SYP-203ENST00000466635 HDAC1Q13547 482 aaPredicted RBP16.62■□□□□ 0.25
SYP-203ENST00000466635 DCAF8Q5TAQ9 597 aa16.62■□□□□ 0.25
SYP-203ENST00000466635 LARGE2Q8N3Y3 721 aa16.62■□□□□ 0.25
SYP-203ENST00000466635 VGLL2Q8N8G2 317 aa16.62■□□□□ 0.25
SYP-203ENST00000466635 JDP2Q8WYK2 163 aa16.62■□□□□ 0.25
SYP-203ENST00000466635 LRRC37AA6NMS7 1700 aa16.62■□□□□ 0.25
SYP-203ENST00000466635 RIMBP2O15034 1052 aa16.61■□□□□ 0.25
SYP-203ENST00000466635 IFIT1P09914 478 aaKnown RBP16.61■□□□□ 0.25
SYP-203ENST00000466635 SLC5A1P13866 664 aa16.61■□□□□ 0.25
SYP-203ENST00000466635 KIAA2012Q0VF49 1180 aa16.61■□□□□ 0.25
SYP-203ENST00000466635 AOC3Q16853 763 aa16.61■□□□□ 0.25
SYP-203ENST00000466635 C9orf131Q5VYM1 1079 aa16.61■□□□□ 0.25
SYP-203ENST00000466635 LPIN2Q92539 896 aa16.61■□□□□ 0.25
SYP-203ENST00000466635 DCTPP1Q9H773 170 aa16.61■□□□□ 0.25
SYP-203ENST00000466635 RNF181Q9P0P0 153 aa16.61■□□□□ 0.25
SYP-203ENST00000466635 SASH1O94885 1247 aa16.6■□□□□ 0.25
SYP-203ENST00000466635 ATP2B3Q16720 1220 aa16.6■□□□□ 0.25
SYP-203ENST00000466635 C15orf52Q6ZUT6 534 aaKnown RBP16.6■□□□□ 0.25
SYP-203ENST00000466635 NIM1KQ8IY84 436 aa16.6■□□□□ 0.25
SYP-203ENST00000466635 KIF1BPQ96EK5 621 aa16.6■□□□□ 0.25
SYP-203ENST00000466635 GPR101Q96P66 508 aaPredicted RBP16.6■□□□□ 0.25
SYP-203ENST00000466635 MED23Q9ULK4 1368 aa16.6■□□□□ 0.25
SYP-203ENST00000466635 WTIPA6NIX2 430 aaPredicted RBP16.59■□□□□ 0.25
SYP-203ENST00000466635 SNAP23O00161 211 aa16.59■□□□□ 0.25
SYP-203ENST00000466635 APBB1O00213 710 aa16.59■□□□□ 0.25
SYP-203ENST00000466635 CAVIN4Q5BKX8 364 aa16.59■□□□□ 0.25
SYP-203ENST00000466635 RHPN1Q8TCX5 695 aa16.59■□□□□ 0.25
SYP-203ENST00000466635 GPR108Q9NPR9 543 aa16.59■□□□□ 0.25
SYP-203ENST00000466635 FGFR2P21802 821 aa16.58■□□□□ 0.24
SYP-203ENST00000466635 PRELPP51888 382 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms