RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 LRRC37AA6NMS7 1700 aa18.03■□□□□ 0.48
DNMT3A-208ENST00000466601 LMNB1P20700 586 aa18.03■□□□□ 0.48
DNMT3A-208ENST00000466601 PRELPP51888 382 aa18.03■□□□□ 0.48
DNMT3A-208ENST00000466601 ATP8B2P98198 1209 aa18.03■□□□□ 0.48
DNMT3A-208ENST00000466601 PTPN12Q05209 780 aaKnown RBP18.03■□□□□ 0.48
DNMT3A-208ENST00000466601 SUPT20HQ8NEM7 779 aa18.03■□□□□ 0.48
DNMT3A-208ENST00000466601 RTFDC1Q9BY42 306 aaPredicted RBP18.03■□□□□ 0.48
DNMT3A-208ENST00000466601 PUS3Q9BZE2 481 aaKnown RBP18.03■□□□□ 0.48
DNMT3A-208ENST00000466601 ZNF277Q9NRM2 450 aaPredicted RBP18.03■□□□□ 0.48
DNMT3A-208ENST00000466601 PODXL2Q9NZ53 605 aa18.03■□□□□ 0.48
DNMT3A-208ENST00000466601 ANKIB1Q9P2G1 1089 aa18.03■□□□□ 0.48
DNMT3A-208ENST00000466601 CHRNDQ07001 517 aa18.02■□□□□ 0.48
DNMT3A-208ENST00000466601 C9orf131Q5VYM1 1079 aa18.02■□□□□ 0.48
DNMT3A-208ENST00000466601 ANKRD2Q9GZV1 360 aa18.02■□□□□ 0.48
DNMT3A-208ENST00000466601 RNF181Q9P0P0 153 aa18.02■□□□□ 0.48
DNMT3A-208ENST00000466601 SPEF2Q9C093 1822 aa18.02■□□□□ 0.47
DNMT3A-208ENST00000466601 XDHP47989 1333 aa18.01■□□□□ 0.47
DNMT3A-208ENST00000466601 PNMA6EA0A0J9YXQ4 647 aa18.01■□□□□ 0.47
DNMT3A-208ENST00000466601 C6orf229H3BNL8 230 aa18.01■□□□□ 0.47
DNMT3A-208ENST00000466601 ATP2B4P23634 1241 aa18.01■□□□□ 0.47
DNMT3A-208ENST00000466601 TBC1D16Q8TBP0 767 aa18.01■□□□□ 0.47
DNMT3A-208ENST00000466601 CRBNQ96SW2 442 aa18.01■□□□□ 0.47
DNMT3A-208ENST00000466601 POLLQ9UGP5 575 aa18.01■□□□□ 0.47
DNMT3A-208ENST00000466601 GGA1Q9UJY5 639 aa18.01■□□□□ 0.47
DNMT3A-208ENST00000466601 RIPOR2Q9Y4F9 1068 aa18.01■□□□□ 0.47
DNMT3A-208ENST00000466601 UFL1O94874 794 aa18■□□□□ 0.47
DNMT3A-208ENST00000466601 IARSP41252 1262 aaKnown RBP18■□□□□ 0.47
DNMT3A-208ENST00000466601 LRRC24Q50LG9 513 aa18■□□□□ 0.47
DNMT3A-208ENST00000466601 CEP85Q6P2H3 762 aa18■□□□□ 0.47
DNMT3A-208ENST00000466601 VPS33BQ9H267 617 aa18■□□□□ 0.47
DNMT3A-208ENST00000466601 COPRSQ9NQ92 184 aa18■□□□□ 0.47
DNMT3A-208ENST00000466601 PA2G4Q9UQ80 394 aaKnown RBP18■□□□□ 0.47
DNMT3A-208ENST00000466601 EYA2O00167 538 aa17.99■□□□□ 0.47
DNMT3A-208ENST00000466601 HELBQ8NG08 1087 aaPredicted RBP17.99■□□□□ 0.47
DNMT3A-208ENST00000466601 SSH3Q8TE77 659 aa17.99■□□□□ 0.47
DNMT3A-208ENST00000466601 EYA3Q99504 573 aa17.99■□□□□ 0.47
DNMT3A-208ENST00000466601 SIL1Q9H173 461 aa17.99■□□□□ 0.47
DNMT3A-208ENST00000466601 FBXO3Q9UK99 471 aa17.99■□□□□ 0.47
DNMT3A-208ENST00000466601 LEMD3Q9Y2U8 911 aa17.99■□□□□ 0.47
DNMT3A-208ENST00000466601 SBF1O95248 1867 aa17.99■□□□□ 0.47
DNMT3A-208ENST00000466601 MROH5Q6ZUA9 1318 aa17.98■□□□□ 0.47
DNMT3A-208ENST00000466601 CHD4Q14839 1912 aa17.98■□□□□ 0.47
DNMT3A-208ENST00000466601 PPIP5K2O43314 1243 aa17.98■□□□□ 0.47
DNMT3A-208ENST00000466601 TAF5LO75529 589 aa17.98■□□□□ 0.47
DNMT3A-208ENST00000466601 POLA2Q14181 598 aa17.98■□□□□ 0.47
DNMT3A-208ENST00000466601 AOC3Q16853 763 aa17.98■□□□□ 0.47
DNMT3A-208ENST00000466601 WASHC4Q2M389 1173 aa17.98■□□□□ 0.47
DNMT3A-208ENST00000466601 RPAP2Q8IXW5 612 aaPredicted RBP17.98■□□□□ 0.47
DNMT3A-208ENST00000466601 LARGE2Q8N3Y3 721 aa17.98■□□□□ 0.47
DNMT3A-208ENST00000466601 DUOX1Q9NRD9 1551 aa17.98■□□□□ 0.47
DNMT3A-208ENST00000466601 WTIPA6NIX2 430 aaPredicted RBP17.97■□□□□ 0.47
DNMT3A-208ENST00000466601 CIAO1O76071 339 aa17.97■□□□□ 0.47
DNMT3A-208ENST00000466601 KIAA2012Q0VF49 1180 aa17.97■□□□□ 0.47
DNMT3A-208ENST00000466601 METTL24Q5JXM2 366 aa17.97■□□□□ 0.47
DNMT3A-208ENST00000466601 ATG9AQ7Z3C6 839 aa17.97■□□□□ 0.47
DNMT3A-208ENST00000466601 GPR101Q96P66 508 aaPredicted RBP17.97■□□□□ 0.47
DNMT3A-208ENST00000466601 LTBP1Q14766 1721 aa17.97■□□□□ 0.47
DNMT3A-208ENST00000466601 ZNF804BA4D1E1 1349 aa17.97■□□□□ 0.47
DNMT3A-208ENST00000466601 UTRNP46939 3433 aa17.96■□□□□ 0.47
DNMT3A-208ENST00000466601 RIMBP2O15034 1052 aa17.96■□□□□ 0.47
DNMT3A-208ENST00000466601 KCNJ4P48050 445 aa17.96■□□□□ 0.47
DNMT3A-208ENST00000466601 ZC3H12CQ9C0D7 883 aaKnown RBP17.96■□□□□ 0.47
DNMT3A-208ENST00000466601 CCDC88AQ3V6T2 1871 aa17.96■□□□□ 0.47
DNMT3A-208ENST00000466601 IL15P40933 162 aaPredicted RBP17.95■□□□□ 0.46
DNMT3A-208ENST00000466601 JDP2Q8WYK2 163 aa17.95■□□□□ 0.46
DNMT3A-208ENST00000466601 SNAP23O00161 211 aa17.94■□□□□ 0.46
DNMT3A-208ENST00000466601 PDE8BO95263 885 aa17.94■□□□□ 0.46
DNMT3A-208ENST00000466601 CENPBP07199 599 aaPredicted RBP17.94■□□□□ 0.46
DNMT3A-208ENST00000466601 G3BP1Q13283 466 aaKnown RBP eCLIP17.94■□□□□ 0.46
DNMT3A-208ENST00000466601 SIRT2Q8IXJ6 389 aa17.94■□□□□ 0.46
DNMT3A-208ENST00000466601 NIM1KQ8IY84 436 aa17.94■□□□□ 0.46
DNMT3A-208ENST00000466601 VGLL2Q8N8G2 317 aa17.94■□□□□ 0.46
DNMT3A-208ENST00000466601 CEP126Q9P2H0 1117 aa17.94■□□□□ 0.46
DNMT3A-208ENST00000466601 HMMRO75330 724 aa17.93■□□□□ 0.46
DNMT3A-208ENST00000466601 SURF6O75683 361 aaKnown RBP17.93■□□□□ 0.46
DNMT3A-208ENST00000466601 YY1P25490 414 aa17.93■□□□□ 0.46
DNMT3A-208ENST00000466601 UBE4AQ14139 1066 aa17.93■□□□□ 0.46
DNMT3A-208ENST00000466601 ZC3H4Q9UPT8 1303 aaKnown RBP17.93■□□□□ 0.46
DNMT3A-208ENST00000466601 MED23Q9ULK4 1368 aa17.92■□□□□ 0.46
DNMT3A-208ENST00000466601 DICER1Q9UPY3 1922 aaKnown RBP17.92■□□□□ 0.46
DNMT3A-208ENST00000466601 G3V3G9 751 aa17.92■□□□□ 0.46
DNMT3A-208ENST00000466601 DCAF8Q5TAQ9 597 aa17.92■□□□□ 0.46
DNMT3A-208ENST00000466601 EXOC6Q8TAG9 804 aa17.92■□□□□ 0.46
DNMT3A-208ENST00000466601 NOP58Q9Y2X3 529 aaKnown RBP17.92■□□□□ 0.46
DNMT3A-208ENST00000466601 COL4A5P29400 1685 aa17.92■□□□□ 0.46
DNMT3A-208ENST00000466601 A0A1B0GUL6 1792 aa17.91■□□□□ 0.46
DNMT3A-208ENST00000466601 FZD9O00144 591 aa17.91■□□□□ 0.46
DNMT3A-208ENST00000466601 KLRK1P26718 216 aa17.91■□□□□ 0.46
DNMT3A-208ENST00000466601 IRX6P78412 446 aaPredicted RBP17.91■□□□□ 0.46
DNMT3A-208ENST00000466601 AAMPQ13685 434 aa17.91■□□□□ 0.46
DNMT3A-208ENST00000466601 DOK7Q18PE1 504 aa17.91■□□□□ 0.46
DNMT3A-208ENST00000466601 C15orf52Q6ZUT6 534 aaKnown RBP17.91■□□□□ 0.46
DNMT3A-208ENST00000466601 TXNRD3Q86VQ6 643 aa17.91■□□□□ 0.46
DNMT3A-208ENST00000466601 DBNDD1Q9H9R9 158 aa17.91■□□□□ 0.46
DNMT3A-208ENST00000466601 ZNRF3Q9ULT6 936 aa17.91■□□□□ 0.46
DNMT3A-208ENST00000466601 OS9Q13438 667 aaPredicted RBP17.9■□□□□ 0.46
DNMT3A-208ENST00000466601 PUM3Q15397 648 aaKnown RBP17.9■□□□□ 0.46
DNMT3A-208ENST00000466601 PCDHB15Q9Y5E8 787 aa17.9■□□□□ 0.46
DNMT3A-208ENST00000466601 IRS2Q9Y4H2 1338 aa17.9■□□□□ 0.46
DNMT3A-208ENST00000466601 ECE2O60344 883 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms