RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 PAXIP1Q6ZW49 1069 aaPredicted RBP24.63■■□□□ 1.53
COL9A3-206ENST00000466532 MICALL2Q8IY33 904 aa24.63■■□□□ 1.53
COL9A3-206ENST00000466532 PI4KAP1Q8N8J0 262 aa24.63■■□□□ 1.53
COL9A3-206ENST00000466532 ZC3H15Q8WU90 426 aaKnown RBP24.63■■□□□ 1.53
COL9A3-206ENST00000466532 GLIS2Q9BZE0 524 aaPredicted RBP24.63■■□□□ 1.53
COL9A3-206ENST00000466532 WBP1LQ9NX94 342 aa24.63■■□□□ 1.53
COL9A3-206ENST00000466532 CTCFP49711 727 aaPredicted RBP24.62■■□□□ 1.53
COL9A3-206ENST00000466532 TWISTNBQ3B726 338 aaPredicted RBP24.62■■□□□ 1.53
COL9A3-206ENST00000466532 ZC3H12CQ9C0D7 883 aaKnown RBP24.62■■□□□ 1.53
COL9A3-206ENST00000466532 MRS2Q9HD23 443 aa24.62■■□□□ 1.53
COL9A3-206ENST00000466532 PODXL2Q9NZ53 605 aa24.62■■□□□ 1.53
COL9A3-206ENST00000466532 ANKIB1Q9P2G1 1089 aa24.62■■□□□ 1.53
COL9A3-206ENST00000466532 UFL1O94874 794 aa24.61■■□□□ 1.53
COL9A3-206ENST00000466532 ZEB1P37275 1124 aaPredicted RBP24.61■■□□□ 1.53
COL9A3-206ENST00000466532 NEXNQ0ZGT2 675 aa24.61■■□□□ 1.53
COL9A3-206ENST00000466532 DPF2Q92785 391 aa24.61■■□□□ 1.53
COL9A3-206ENST00000466532 KCNQ5Q9NR82 932 aa24.61■■□□□ 1.53
COL9A3-206ENST00000466532 TLL2Q9Y6L7 1015 aa24.61■■□□□ 1.53
COL9A3-206ENST00000466532 IL16Q14005 1332 aa24.61■■□□□ 1.53
COL9A3-206ENST00000466532 RTL9Q8NET4 1388 aa24.6■■□□□ 1.53
COL9A3-206ENST00000466532 CELF2O95319 508 aaKnown RBP24.6■■□□□ 1.53
COL9A3-206ENST00000466532 IGKV5-2P06315 115 aa24.6■■□□□ 1.53
COL9A3-206ENST00000466532 ECE1P42892 770 aa24.6■■□□□ 1.53
COL9A3-206ENST00000466532 GRM1Q13255 1194 aa24.6■■□□□ 1.53
COL9A3-206ENST00000466532 CAPNS2Q96L46 248 aa24.6■■□□□ 1.53
COL9A3-206ENST00000466532 PRDM10Q9NQV6 1147 aa24.6■■□□□ 1.53
COL9A3-206ENST00000466532 GGA1Q9UJY5 639 aa24.6■■□□□ 1.53
COL9A3-206ENST00000466532 MAP2K1Q02750 393 aaPredicted RBP24.59■■□□□ 1.53
COL9A3-206ENST00000466532 CYP4F22Q6NT55 531 aa24.59■■□□□ 1.53
COL9A3-206ENST00000466532 CDC37L1Q7L3B6 337 aa24.59■■□□□ 1.53
COL9A3-206ENST00000466532 ANKRD18AQ8IVF6 992 aa24.59■■□□□ 1.53
COL9A3-206ENST00000466532 G3V3G9 751 aa24.58■■□□□ 1.53
COL9A3-206ENST00000466532 ANP32CO43423 234 aa24.58■■□□□ 1.53
COL9A3-206ENST00000466532 RPS12P25398 132 aaKnown RBP24.58■■□□□ 1.53
COL9A3-206ENST00000466532 NCBP3Q53F19 620 aaKnown RBP24.58■■□□□ 1.53
COL9A3-206ENST00000466532 DCAF8Q5TAQ9 597 aa24.58■■□□□ 1.53
COL9A3-206ENST00000466532 G2E3Q7L622 706 aa24.58■■□□□ 1.53
COL9A3-206ENST00000466532 SAMD7Q7Z3H4 446 aa24.58■■□□□ 1.53
COL9A3-206ENST00000466532 SLC4A2P04920 1241 aa24.57■■□□□ 1.52
COL9A3-206ENST00000466532 CTSWP56202 376 aa24.57■■□□□ 1.52
COL9A3-206ENST00000466532 CWF19L2Q2TBE0 894 aaKnown RBP24.57■■□□□ 1.52
COL9A3-206ENST00000466532 TBC1D10BQ4KMP7 808 aaPredicted RBP24.57■■□□□ 1.52
COL9A3-206ENST00000466532 ZNF408Q9H9D4 720 aa24.57■■□□□ 1.52
COL9A3-206ENST00000466532 LBX1P52954 281 aa24.56■■□□□ 1.52
COL9A3-206ENST00000466532 SAPCD2Q86UD0 394 aa24.56■■□□□ 1.52
COL9A3-206ENST00000466532 XDHP47989 1333 aa24.56■■□□□ 1.52
COL9A3-206ENST00000466532 ZNF316A6NFI3 1004 aaPredicted RBP24.55■■□□□ 1.52
COL9A3-206ENST00000466532 NEURL1BA8MQ27 555 aa24.55■■□□□ 1.52
COL9A3-206ENST00000466532 CDC5LQ99459 802 aaKnown RBP24.55■■□□□ 1.52
COL9A3-206ENST00000466532 SALL2Q9Y467 1007 aaPredicted RBP24.55■■□□□ 1.52
COL9A3-206ENST00000466532 FANCIQ9NVI1 1328 aa24.55■■□□□ 1.52
COL9A3-206ENST00000466532 EGFRP00533 1210 aa24.54■■□□□ 1.52
COL9A3-206ENST00000466532 RBM26Q5T8P6 1007 aaKnown RBP24.54■■□□□ 1.52
COL9A3-206ENST00000466532 USP48Q86UV5 1035 aa24.54■■□□□ 1.52
COL9A3-206ENST00000466532 TTLL11Q8NHH1 800 aa24.54■■□□□ 1.52
COL9A3-206ENST00000466532 ZNF646O15015 1829 aaPredicted RBP24.54■■□□□ 1.52
COL9A3-206ENST00000466532 VIL1P09327 827 aaKnown RBP24.53■■□□□ 1.52
COL9A3-206ENST00000466532 HSPA8P11142 646 aaKnown RBP24.53■■□□□ 1.52
COL9A3-206ENST00000466532 FLIIQ13045 1269 aa24.53■■□□□ 1.52
COL9A3-206ENST00000466532 UBE3BQ7Z3V4 1068 aa24.53■■□□□ 1.52
COL9A3-206ENST00000466532 GREM2Q9H772 168 aa24.53■■□□□ 1.52
COL9A3-206ENST00000466532 ATP2B4P23634 1241 aa24.52■■□□□ 1.52
COL9A3-206ENST00000466532 H7C1W4 665 aa24.51■■□□□ 1.51
COL9A3-206ENST00000466532 AOC2O75106 756 aa24.51■■□□□ 1.51
COL9A3-206ENST00000466532 FKBP5Q13451 457 aaPredicted RBP24.51■■□□□ 1.51
COL9A3-206ENST00000466532 KIF4BQ2VIQ3 1234 aa24.51■■□□□ 1.51
COL9A3-206ENST00000466532 WDR63Q8IWG1 891 aa24.51■■□□□ 1.51
COL9A3-206ENST00000466532 HHIPL1Q96JK4 782 aa24.51■■□□□ 1.51
COL9A3-206ENST00000466532 BEGAINQ9BUH8 593 aa24.51■■□□□ 1.51
COL9A3-206ENST00000466532 DLK2Q6UY11 383 aa24.5■■□□□ 1.51
COL9A3-206ENST00000466532 KRT26Q7Z3Y9 468 aa24.5■■□□□ 1.51
COL9A3-206ENST00000466532 DCPSQ96C86 337 aaKnown RBP24.5■■□□□ 1.51
COL9A3-206ENST00000466532 BSDC1Q9NW68 430 aaPredicted RBP24.5■■□□□ 1.51
COL9A3-206ENST00000466532 ZNF609O15014 1411 aa24.5■■□□□ 1.51
COL9A3-206ENST00000466532 MAP2K2P36507 400 aa24.49■■□□□ 1.51
COL9A3-206ENST00000466532 GCKRQ14397 625 aa24.49■■□□□ 1.51
COL9A3-206ENST00000466532 DNAAF4Q8WXU2 420 aa24.49■■□□□ 1.51
COL9A3-206ENST00000466532 MINPP1Q9UNW1 487 aa24.49■■□□□ 1.51
COL9A3-206ENST00000466532 A0A1B0GUL6 1792 aa24.49■■□□□ 1.51
COL9A3-206ENST00000466532 VAMP4O75379 141 aa24.48■■□□□ 1.51
COL9A3-206ENST00000466532 RSBN1LQ6PCB5 846 aaPredicted RBP24.48■■□□□ 1.51
COL9A3-206ENST00000466532 AGBL3Q8NEM8 1001 aa24.48■■□□□ 1.51
COL9A3-206ENST00000466532 MED23Q9ULK4 1368 aa24.47■■□□□ 1.51
COL9A3-206ENST00000466532 ADM5C9JUS6 153 aa24.47■■□□□ 1.51
COL9A3-206ENST00000466532 EXOSC9Q06265 439 aaKnown RBP24.47■■□□□ 1.51
COL9A3-206ENST00000466532 MYH16Q9H6N6 1097 aa24.47■■□□□ 1.51
COL9A3-206ENST00000466532 WTIPA6NIX2 430 aaPredicted RBP24.46■■□□□ 1.51
COL9A3-206ENST00000466532 IGHMBP2P38935 993 aaKnown RBP24.46■■□□□ 1.51
COL9A3-206ENST00000466532 PODNQ7Z5L7 613 aa24.46■■□□□ 1.51
COL9A3-206ENST00000466532 PLA2G12BQ9BX93 195 aa24.46■■□□□ 1.51
COL9A3-206ENST00000466532 GGA3Q9NZ52 723 aa24.46■■□□□ 1.51
COL9A3-206ENST00000466532 USP17L3A6NCW0 530 aa24.45■■□□□ 1.5
COL9A3-206ENST00000466532 USP17L4A6NCW7 530 aa24.45■■□□□ 1.5
COL9A3-206ENST00000466532 CCT4P50991 539 aaKnown RBP24.45■■□□□ 1.5
COL9A3-206ENST00000466532 HUNKP57058 714 aa24.45■■□□□ 1.5
COL9A3-206ENST00000466532 USP17L1Q7RTZ2 530 aa24.45■■□□□ 1.5
COL9A3-206ENST00000466532 LINS1Q8NG48 757 aa24.45■■□□□ 1.5
COL9A3-206ENST00000466532 ASTN2O75129 1339 aaPredicted RBP24.44■■□□□ 1.5
COL9A3-206ENST00000466532 CASP7P55210 303 aa24.44■■□□□ 1.5
COL9A3-206ENST00000466532 ZNF280AP59817 542 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms