RNA–Protein interactions for RNA: ENST00000466217.5

ATG9A-219, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-219ENST00000466217 IRS4O14654 1257 aaPredicted RBP17.9■□□□□ 0.46
ATG9A-219ENST00000466217 RIMBP2O15034 1052 aa17.9■□□□□ 0.46
ATG9A-219ENST00000466217 HSP90B1P14625 803 aaKnown RBP17.9■□□□□ 0.46
ATG9A-219ENST00000466217 NEUROD2Q15784 382 aa17.89■□□□□ 0.45
ATG9A-219ENST00000466217 KIF4BQ2VIQ3 1234 aa17.89■□□□□ 0.45
ATG9A-219ENST00000466217 DLK2Q6UY11 383 aa17.89■□□□□ 0.45
ATG9A-219ENST00000466217 ZC3H12CQ9C0D7 883 aaKnown RBP17.89■□□□□ 0.45
ATG9A-219ENST00000466217 KCNQ5Q9NR82 932 aa17.89■□□□□ 0.45
ATG9A-219ENST00000466217 LAS1LQ9Y4W2 734 aaKnown RBP17.89■□□□□ 0.45
ATG9A-219ENST00000466217 COL4A1P02462 1669 aa17.89■□□□□ 0.45
ATG9A-219ENST00000466217 POLR2AP24928 1970 aaKnown RBP17.88■□□□□ 0.45
ATG9A-219ENST00000466217 ADM5C9JUS6 153 aa17.88■□□□□ 0.45
ATG9A-219ENST00000466217 DOK7Q18PE1 504 aa17.88■□□□□ 0.45
ATG9A-219ENST00000466217 SULF1Q8IWU6 871 aa17.88■□□□□ 0.45
ATG9A-219ENST00000466217 CCDC146Q8IYE0 955 aa17.88■□□□□ 0.45
ATG9A-219ENST00000466217 ZBTB38Q8NAP3 1195 aaPredicted RBP17.88■□□□□ 0.45
ATG9A-219ENST00000466217 ZNF428Q96B54 188 aa17.88■□□□□ 0.45
ATG9A-219ENST00000466217 CFAP44Q96MT7 982 aa17.88■□□□□ 0.45
ATG9A-219ENST00000466217 MYBBP1AQ9BQG0 1328 aaKnown RBP17.88■□□□□ 0.45
ATG9A-219ENST00000466217 SLC10A3P09131 477 aa17.87■□□□□ 0.45
ATG9A-219ENST00000466217 ZNF157P51786 506 aaPredicted RBP17.87■□□□□ 0.45
ATG9A-219ENST00000466217 ZNF280AP59817 542 aaPredicted RBP17.87■□□□□ 0.45
ATG9A-219ENST00000466217 KIF23Q02241 960 aaPredicted RBP17.87■□□□□ 0.45
ATG9A-219ENST00000466217 RBM26Q5T8P6 1007 aaKnown RBP17.87■□□□□ 0.45
ATG9A-219ENST00000466217 DUSP27Q5VZP5 1158 aa17.87■□□□□ 0.45
ATG9A-219ENST00000466217 REM2Q8IYK8 340 aaPredicted RBP17.87■□□□□ 0.45
ATG9A-219ENST00000466217 GGA3Q9NZ52 723 aa17.87■□□□□ 0.45
ATG9A-219ENST00000466217 SCN9AQ15858 1988 aa17.86■□□□□ 0.45
ATG9A-219ENST00000466217 TNRC18O15417 2968 aaPredicted RBP17.86■□□□□ 0.45
ATG9A-219ENST00000466217 ZNF316A6NFI3 1004 aaPredicted RBP17.86■□□□□ 0.45
ATG9A-219ENST00000466217 RTL5Q5HYW3 569 aaPredicted RBP17.86■□□□□ 0.45
ATG9A-219ENST00000466217 AGBL3Q8NEM8 1001 aa17.86■□□□□ 0.45
ATG9A-219ENST00000466217 UFL1O94874 794 aa17.85■□□□□ 0.45
ATG9A-219ENST00000466217 FKBP1BP68106 108 aa17.85■□□□□ 0.45
ATG9A-219ENST00000466217 GOLGA2Q08379 1002 aa17.85■□□□□ 0.45
ATG9A-219ENST00000466217 RIC3Q7Z5B4 369 aa17.85■□□□□ 0.45
ATG9A-219ENST00000466217 RNF186Q9NXI6 227 aa17.85■□□□□ 0.45
ATG9A-219ENST00000466217 GGA1Q9UJY5 639 aa17.85■□□□□ 0.45
ATG9A-219ENST00000466217 PITPNM2Q9BZ72 1349 aa17.84■□□□□ 0.45
ATG9A-219ENST00000466217 G3V3G9 751 aa17.84■□□□□ 0.45
ATG9A-219ENST00000466217 WDR43Q15061 677 aaKnown RBP eCLIP17.84■□□□□ 0.45
ATG9A-219ENST00000466217 CCDC152Q4G0S7 254 aa17.84■□□□□ 0.45
ATG9A-219ENST00000466217 DCAF8Q5TAQ9 597 aa17.84■□□□□ 0.45
ATG9A-219ENST00000466217 RSBN1LQ6PCB5 846 aaPredicted RBP17.84■□□□□ 0.45
ATG9A-219ENST00000466217 CCDC191Q8NCU4 936 aa17.84■□□□□ 0.45
ATG9A-219ENST00000466217 CDCA5Q96FF9 252 aa17.84■□□□□ 0.45
ATG9A-219ENST00000466217 SEC31BQ9NQW1 1179 aa17.84■□□□□ 0.45
ATG9A-219ENST00000466217 ANKIB1Q9P2G1 1089 aa17.84■□□□□ 0.45
ATG9A-219ENST00000466217 AKAP11Q9UKA4 1901 aa17.83■□□□□ 0.44
ATG9A-219ENST00000466217 TRPA1O75762 1119 aa17.83■□□□□ 0.44
ATG9A-219ENST00000466217 PCCAP05165 728 aaPredicted RBP17.83■□□□□ 0.44
ATG9A-219ENST00000466217 ZNF853P0CG23 659 aa17.83■□□□□ 0.44
ATG9A-219ENST00000466217 CSRNP1Q96S65 589 aa17.83■□□□□ 0.44
ATG9A-219ENST00000466217 MBIPQ9NS73 344 aa17.83■□□□□ 0.44
ATG9A-219ENST00000466217 PSME4Q14997 1843 aa17.83■□□□□ 0.44
ATG9A-219ENST00000466217 PDE8AO60658 829 aa17.82■□□□□ 0.44
ATG9A-219ENST00000466217 GMLQ99445 158 aa17.82■□□□□ 0.44
ATG9A-219ENST00000466217 PAPPA2Q9BXP8 1791 aa17.81■□□□□ 0.44
ATG9A-219ENST00000466217 ASTN2O75129 1339 aaPredicted RBP17.81■□□□□ 0.44
ATG9A-219ENST00000466217 XDHP47989 1333 aa17.81■□□□□ 0.44
ATG9A-219ENST00000466217 SCARF1Q14162 830 aa17.81■□□□□ 0.44
ATG9A-219ENST00000466217 ANGEL2Q5VTE6 544 aaKnown RBP17.81■□□□□ 0.44
ATG9A-219ENST00000466217 PODNQ7Z5L7 613 aa17.81■□□□□ 0.44
ATG9A-219ENST00000466217 RASAL3Q86YV0 1011 aa17.81■□□□□ 0.44
ATG9A-219ENST00000466217 ADAMTS8Q9UP79 889 aa17.81■□□□□ 0.44
ATG9A-219ENST00000466217 PDE4DIPQ5VU43 2346 aa17.8■□□□□ 0.44
ATG9A-219ENST00000466217 USP17L8P0C7I0 530 aa17.8■□□□□ 0.44
ATG9A-219ENST00000466217 CTU1Q7Z7A3 348 aaKnown RBP17.8■□□□□ 0.44
ATG9A-219ENST00000466217 MYD88Q99836 296 aa17.8■□□□□ 0.44
ATG9A-219ENST00000466217 CHMP4AQ9BY43 222 aa17.8■□□□□ 0.44
ATG9A-219ENST00000466217 PHAXQ9H814 394 aaKnown RBP17.8■□□□□ 0.44
ATG9A-219ENST00000466217 MYOZ2Q9NPC6 264 aa17.8■□□□□ 0.44
ATG9A-219ENST00000466217 IFT57Q9NWB7 429 aa17.8■□□□□ 0.44
ATG9A-219ENST00000466217 CWC25Q9NXE8 425 aaPredicted RBP17.8■□□□□ 0.44
ATG9A-219ENST00000466217 PCDH10Q9P2E7 1040 aa17.8■□□□□ 0.44
ATG9A-219ENST00000466217 USP17L3A6NCW0 530 aa17.79■□□□□ 0.44
ATG9A-219ENST00000466217 USP17L4A6NCW7 530 aa17.79■□□□□ 0.44
ATG9A-219ENST00000466217 ATP2B4P23634 1241 aa17.79■□□□□ 0.44
ATG9A-219ENST00000466217 CALD1Q05682 793 aaKnown RBP17.79■□□□□ 0.44
ATG9A-219ENST00000466217 USP17L1Q7RTZ2 530 aa17.79■□□□□ 0.44
ATG9A-219ENST00000466217 ANKRD18AQ8IVF6 992 aa17.79■□□□□ 0.44
ATG9A-219ENST00000466217 METTL22Q9BUU2 404 aaPredicted RBP17.78■□□□□ 0.44
ATG9A-219ENST00000466217 DDX58O95786 925 aaKnown RBP17.77■□□□□ 0.44
ATG9A-219ENST00000466217 GNAI1P63096 354 aa17.77■□□□□ 0.44
ATG9A-219ENST00000466217 CDC5LQ99459 802 aaKnown RBP17.77■□□□□ 0.44
ATG9A-219ENST00000466217 MED23Q9ULK4 1368 aa17.77■□□□□ 0.43
ATG9A-219ENST00000466217 MMP14P50281 582 aa17.76■□□□□ 0.43
ATG9A-219ENST00000466217 PKN2Q16513 984 aaKnown RBP17.76■□□□□ 0.43
ATG9A-219ENST00000466217 CTSWP56202 376 aa17.75■□□□□ 0.43
ATG9A-219ENST00000466217 BSDC1Q9NW68 430 aaPredicted RBP17.75■□□□□ 0.43
ATG9A-219ENST00000466217 MYO3BQ8WXR4 1341 aa17.74■□□□□ 0.43
ATG9A-219ENST00000466217 SOX10P56693 466 aa17.74■□□□□ 0.43
ATG9A-219ENST00000466217 NOM1Q5C9Z4 860 aaKnown RBP17.74■□□□□ 0.43
ATG9A-219ENST00000466217 CCDC30Q5VVM6 783 aa17.74■□□□□ 0.43
ATG9A-219ENST00000466217 CCDC85AQ96PX6 553 aaPredicted RBP17.74■□□□□ 0.43
ATG9A-219ENST00000466217 ELL2O00472 640 aaPredicted RBP17.73■□□□□ 0.43
ATG9A-219ENST00000466217 DDX10Q13206 875 aaKnown RBP17.73■□□□□ 0.43
ATG9A-219ENST00000466217 DACT2Q5SW24 774 aa17.73■□□□□ 0.43
ATG9A-219ENST00000466217 OGFOD1Q8N543 542 aa17.73■□□□□ 0.43
ATG9A-219ENST00000466217 MINPP1Q9UNW1 487 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms