RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SASH1O94885 1247 aa13.82□□□□□ -0.2
VCP-204ENST00000466100 ALDH1B1P30837 517 aa13.82□□□□□ -0.2
VCP-204ENST00000466100 TAF7LQ5H9L4 462 aa13.82□□□□□ -0.2
VCP-204ENST00000466100 PRPF40BQ6NWY9 871 aaKnown RBP13.82□□□□□ -0.2
VCP-204ENST00000466100 LDHAL6AQ6ZMR3 332 aa13.82□□□□□ -0.2
VCP-204ENST00000466100 VGLL2Q8N8G2 317 aa13.82□□□□□ -0.2
VCP-204ENST00000466100 CNKSR1Q969H4 720 aa13.82□□□□□ -0.2
VCP-204ENST00000466100 ZNF622Q969S3 477 aaKnown RBP eCLIP13.82□□□□□ -0.2
VCP-204ENST00000466100 GCC1Q96CN9 775 aa13.82□□□□□ -0.2
VCP-204ENST00000466100 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.82□□□□□ -0.2
VCP-204ENST00000466100 PPEF1O14829 653 aaPredicted RBP13.81□□□□□ -0.2
VCP-204ENST00000466100 IL15P40933 162 aaPredicted RBP13.81□□□□□ -0.2
VCP-204ENST00000466100 HSP90AB4PQ58FF6 505 aa13.81□□□□□ -0.2
VCP-204ENST00000466100 TMC4Q7Z404 712 aa13.81□□□□□ -0.2
VCP-204ENST00000466100 C7orf43Q8WVR3 580 aa13.81□□□□□ -0.2
VCP-204ENST00000466100 MPHOSPH8Q99549 860 aa13.81□□□□□ -0.2
VCP-204ENST00000466100 PPP1R1BQ9UD71 204 aaPredicted RBP13.81□□□□□ -0.2
VCP-204ENST00000466100 MINPP1Q9UNW1 487 aa13.81□□□□□ -0.2
VCP-204ENST00000466100 ZNF609O15014 1411 aa13.81□□□□□ -0.2
VCP-204ENST00000466100 RAB11FIP3O75154 756 aa13.8□□□□□ -0.2
VCP-204ENST00000466100 G3BP1Q13283 466 aaKnown RBP eCLIP13.8□□□□□ -0.27e-11■■■□□ 18.5
VCP-204ENST00000466100 CENPQQ7L2Z9 268 aaPredicted RBP13.8□□□□□ -0.2
VCP-204ENST00000466100 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
VCP-204ENST00000466100 TTLL6Q8N841 843 aa13.8□□□□□ -0.2
VCP-204ENST00000466100 CNNM1Q9NRU3 951 aa13.8□□□□□ -0.2
VCP-204ENST00000466100 ATP6V0A2Q9Y487 856 aa13.8□□□□□ -0.2
VCP-204ENST00000466100 MROH5Q6ZUA9 1318 aa13.8□□□□□ -0.2
VCP-204ENST00000466100 CHRNDQ07001 517 aa13.79□□□□□ -0.2
VCP-204ENST00000466100 ERC1Q8IUD2 1116 aa13.79□□□□□ -0.2
VCP-204ENST00000466100 SP8Q8IXZ3 490 aa13.79□□□□□ -0.2
VCP-204ENST00000466100 RHPN1Q8TCX5 695 aa13.79□□□□□ -0.2
VCP-204ENST00000466100 KIF1BPQ96EK5 621 aa13.79□□□□□ -0.2
VCP-204ENST00000466100 SYT17Q9BSW7 474 aa13.79□□□□□ -0.2
VCP-204ENST00000466100 PIM2Q9P1W9 311 aa13.79□□□□□ -0.2
VCP-204ENST00000466100 NUCB1Q02818 461 aa13.78□□□□□ -0.2
VCP-204ENST00000466100 TFCP2Q12800 502 aa13.78□□□□□ -0.2
VCP-204ENST00000466100 OLFM4Q6UX06 510 aa13.78□□□□□ -0.2
VCP-204ENST00000466100 MYH13Q9UKX3 1938 aa13.78□□□□□ -0.2
VCP-204ENST00000466100 PDE8BO95263 885 aa13.77□□□□□ -0.21
VCP-204ENST00000466100 FGFR2P21802 821 aa13.77□□□□□ -0.21
VCP-204ENST00000466100 OS9Q13438 667 aaPredicted RBP13.77□□□□□ -0.21
VCP-204ENST00000466100 METTL24Q5JXM2 366 aa13.77□□□□□ -0.21
VCP-204ENST00000466100 LRRCC1Q9C099 1032 aa13.77□□□□□ -0.21
VCP-204ENST00000466100 GPR108Q9NPR9 543 aa13.77□□□□□ -0.21
VCP-204ENST00000466100 PODXL2Q9NZ53 605 aa13.77□□□□□ -0.21
VCP-204ENST00000466100 IRS2Q9Y4H2 1338 aa13.77□□□□□ -0.21
VCP-204ENST00000466100 AKAP11Q9UKA4 1901 aa13.76□□□□□ -0.21
VCP-204ENST00000466100 CCDC88AQ3V6T2 1871 aa13.76□□□□□ -0.21
VCP-204ENST00000466100 ZNF646O15015 1829 aaPredicted RBP13.76□□□□□ -0.21
VCP-204ENST00000466100 XDHP47989 1333 aa13.76□□□□□ -0.21
VCP-204ENST00000466100 WTIPA6NIX2 430 aaPredicted RBP13.76□□□□□ -0.21
VCP-204ENST00000466100 APBB1O00213 710 aa13.76□□□□□ -0.21
VCP-204ENST00000466100 SMARCA5O60264 1052 aaPredicted RBP13.76□□□□□ -0.21
VCP-204ENST00000466100 GPSM2P81274 684 aa13.76□□□□□ -0.21
VCP-204ENST00000466100 DALRD3Q5D0E6 543 aaKnown RBP13.76□□□□□ -0.21
VCP-204ENST00000466100 HELBQ8NG08 1087 aaPredicted RBP13.76□□□□□ -0.21
VCP-204ENST00000466100 ANKRD2Q9GZV1 360 aa13.76□□□□□ -0.21
VCP-204ENST00000466100 IL1RAPL2Q9NP60 686 aa13.76□□□□□ -0.21
VCP-204ENST00000466100 CEP126Q9P2H0 1117 aa13.76□□□□□ -0.21
VCP-204ENST00000466100 CHD4Q14839 1912 aa13.76□□□□□ -0.21
VCP-204ENST00000466100 SBF1O95248 1867 aa13.76□□□□□ -0.21
VCP-204ENST00000466100 SALL3Q9BXA9 1300 aa13.75□□□□□ -0.21
VCP-204ENST00000466100 DICER1Q9UPY3 1922 aaKnown RBP13.75□□□□□ -0.21
VCP-204ENST00000466100 SNAP23O00161 211 aa13.75□□□□□ -0.21
VCP-204ENST00000466100 TAF5LO75529 589 aa13.75□□□□□ -0.21
VCP-204ENST00000466100 TNNI3KQ59H18 835 aa13.75□□□□□ -0.21
VCP-204ENST00000466100 CC2D2BQ6DHV5 1058 aa13.75□□□□□ -0.21
VCP-204ENST00000466100 CHD1LQ86WJ1 897 aa13.75□□□□□ -0.21
VCP-204ENST00000466100 EAF2Q96CJ1 260 aaPredicted RBP13.75□□□□□ -0.21
VCP-204ENST00000466100 FPGT-TNNI3KV9GXZ4 949 aa13.75□□□□□ -0.21
VCP-204ENST00000466100 PSME4Q14997 1843 aa13.74□□□□□ -0.21
VCP-204ENST00000466100 C21orf2O43822 256 aa13.74□□□□□ -0.21
VCP-204ENST00000466100 UBE4AQ14139 1066 aa13.74□□□□□ -0.21
VCP-204ENST00000466100 PUM3Q15397 648 aaKnown RBP13.74□□□□□ -0.21
VCP-204ENST00000466100 ATP2B3Q16720 1220 aa13.74□□□□□ -0.21
VCP-204ENST00000466100 ANKRD45Q5TZF3 282 aa13.74□□□□□ -0.21
VCP-204ENST00000466100 WWC3Q9ULE0 1092 aa13.74□□□□□ -0.21
VCP-204ENST00000466100 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
VCP-204ENST00000466100 PDE4AP27815 886 aa13.73□□□□□ -0.21
VCP-204ENST00000466100 CCDC93Q567U6 631 aa13.73□□□□□ -0.21
VCP-204ENST00000466100 TBC1D16Q8TBP0 767 aa13.73□□□□□ -0.21
VCP-204ENST00000466100 RTFDC1Q9BY42 306 aaPredicted RBP13.73□□□□□ -0.21
VCP-204ENST00000466100 LNPKQ9C0E8 428 aa13.73□□□□□ -0.21
VCP-204ENST00000466100 TLR7Q9NYK1 1049 aaKnown RBP13.73□□□□□ -0.21
VCP-204ENST00000466100 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
VCP-204ENST00000466100 POLLQ9UGP5 575 aa13.73□□□□□ -0.21
VCP-204ENST00000466100 DBNLQ9UJU6 430 aaKnown RBP13.73□□□□□ -0.21
VCP-204ENST00000466100 LEMD3Q9Y2U8 911 aa13.73□□□□□ -0.21
VCP-204ENST00000466100 SCN9AQ15858 1988 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 COL4A5P29400 1685 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 MED23Q9ULK4 1368 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 ZNF804BA4D1E1 1349 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 ATP2B4P23634 1241 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 KLRK1P26718 216 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 ADORA1P30542 326 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 TIMM10P62072 90 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 GRIPAP1Q4V328 841 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 SOGA3Q5TF21 947 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 C15orf52Q6ZUT6 534 aaKnown RBP13.72□□□□□ -0.21
VCP-204ENST00000466100 CLASRPQ8N2M8 674 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms