RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 PPP4CP60510 307 aa7.52□□□□□ -1.21
CHMP3-206ENST00000466032 AIMP1Q12904 312 aaKnown RBP7.52□□□□□ -1.21
CHMP3-206ENST00000466032 PARP10Q53GL7 1025 aa7.52□□□□□ -1.21
CHMP3-206ENST00000466032 BEND3Q5T5X7 828 aa7.52□□□□□ -1.21
CHMP3-206ENST00000466032 NBPF14Q5TI25 921 aa7.52□□□□□ -1.21
CHMP3-206ENST00000466032 NBPF10Q6P3W6 841 aaKnown RBP7.52□□□□□ -1.21
CHMP3-206ENST00000466032 GIGYF2Q6Y7W6 1299 aaKnown RBP7.52□□□□□ -1.21
CHMP3-206ENST00000466032 CENPQQ7L2Z9 268 aaPredicted RBP7.52□□□□□ -1.21
CHMP3-206ENST00000466032 G2E3Q7L622 706 aa7.52□□□□□ -1.21
CHMP3-206ENST00000466032 NBPF15Q8N660 670 aa7.52□□□□□ -1.21
CHMP3-206ENST00000466032 EXOC6Q8TAG9 804 aa7.52□□□□□ -1.21
CHMP3-206ENST00000466032 AK7Q96M32 723 aa7.52□□□□□ -1.21
CHMP3-206ENST00000466032 C9orf78Q9NZ63 289 aaPredicted RBP7.52□□□□□ -1.21
CHMP3-206ENST00000466032 RTCBQ9Y3I0 505 aaKnown RBP7.52□□□□□ -1.21
CHMP3-206ENST00000466032 BTAF1O14981 1849 aa7.52□□□□□ -1.21
CHMP3-206ENST00000466032 BRWD3Q6RI45 1802 aa7.52□□□□□ -1.21
CHMP3-206ENST00000466032 LY75O60449 1722 aa7.52□□□□□ -1.21
CHMP3-206ENST00000466032 ADCY9O60503 1353 aa7.51□□□□□ -1.21
CHMP3-206ENST00000466032 APBA3O96018 575 aa7.51□□□□□ -1.21
CHMP3-206ENST00000466032 UBTFL1P0CB47 393 aaPredicted RBP7.51□□□□□ -1.21
CHMP3-206ENST00000466032 RLBP1P12271 317 aa7.51□□□□□ -1.21
CHMP3-206ENST00000466032 COL9A1P20849 921 aa7.51□□□□□ -1.21
CHMP3-206ENST00000466032 SSFA2P28290 1259 aa7.51□□□□□ -1.21
CHMP3-206ENST00000466032 SMCPP49901 116 aaPredicted RBP7.51□□□□□ -1.21
CHMP3-206ENST00000466032 TCIRG1Q13488 830 aa7.51□□□□□ -1.21
CHMP3-206ENST00000466032 HDAC1Q13547 482 aaPredicted RBP7.51□□□□□ -1.21
CHMP3-206ENST00000466032 C20orf194Q5TEA3 1177 aa7.51□□□□□ -1.21
CHMP3-206ENST00000466032 INTS5Q6P9B9 1019 aaKnown RBP7.51□□□□□ -1.21
CHMP3-206ENST00000466032 DZIP3Q86Y13 1208 aaKnown RBP7.51□□□□□ -1.21
CHMP3-206ENST00000466032 TMEM151AQ8N4L1 468 aa7.51□□□□□ -1.21
CHMP3-206ENST00000466032 SLC4A9Q96Q91 983 aa7.51□□□□□ -1.21
CHMP3-206ENST00000466032 SEPT9Q9UHD8 586 aaPredicted RBP7.51□□□□□ -1.21
CHMP3-206ENST00000466032 UTYO14607 1347 aa7.51□□□□□ -1.21
CHMP3-206ENST00000466032 RREB1Q92766 1687 aa7.51□□□□□ -1.21
CHMP3-206ENST00000466032 TJP1Q07157 1748 aa7.5□□□□□ -1.21
CHMP3-206ENST00000466032 F6X3S4 739 aa7.5□□□□□ -1.21
CHMP3-206ENST00000466032 TNFRSF10AO00220 468 aa7.5□□□□□ -1.21
CHMP3-206ENST00000466032 GRM8O00222 908 aa7.5□□□□□ -1.21
CHMP3-206ENST00000466032 ZPR1O75312 459 aa7.5□□□□□ -1.21
CHMP3-206ENST00000466032 IRX6P78412 446 aaPredicted RBP7.5□□□□□ -1.21
CHMP3-206ENST00000466032 ITPK1Q13572 414 aa7.5□□□□□ -1.21
CHMP3-206ENST00000466032 TXNRD1Q16881 649 aa7.5□□□□□ -1.21
CHMP3-206ENST00000466032 PROSER3Q2NL68 480 aa7.5□□□□□ -1.21
CHMP3-206ENST00000466032 TRAPPC3LQ5T215 181 aa7.5□□□□□ -1.21
CHMP3-206ENST00000466032 PPP1R42Q7Z4L9 355 aa7.5□□□□□ -1.21
CHMP3-206ENST00000466032 GCC1Q96CN9 775 aa7.5□□□□□ -1.21
CHMP3-206ENST00000466032 CWC25Q9NXE8 425 aaPredicted RBP7.5□□□□□ -1.21
CHMP3-206ENST00000466032 DAXXQ9UER7 740 aaPredicted RBP7.5□□□□□ -1.21
CHMP3-206ENST00000466032 NARFQ9UHQ1 456 aa7.5□□□□□ -1.21
CHMP3-206ENST00000466032 ZBTB1Q9Y2K1 713 aa7.5□□□□□ -1.21
CHMP3-206ENST00000466032 N4BP2Q86UW6 1770 aaPredicted RBP7.5□□□□□ -1.21
CHMP3-206ENST00000466032 NEURL1BA8MQ27 555 aa7.49□□□□□ -1.21
CHMP3-206ENST00000466032 ANXA1P04083 346 aa7.49□□□□□ -1.21
CHMP3-206ENST00000466032 GCKRQ14397 625 aa7.49□□□□□ -1.21
CHMP3-206ENST00000466032 CTC1Q2NKJ3 1217 aa7.49□□□□□ -1.21
CHMP3-206ENST00000466032 HSP90AB4PQ58FF6 505 aa7.49□□□□□ -1.21
CHMP3-206ENST00000466032 FAM182BQ5T319 152 aa7.49□□□□□ -1.21
CHMP3-206ENST00000466032 LINC00116Q8NCU8 138 aa7.49□□□□□ -1.21
CHMP3-206ENST00000466032 UBE2Q2Q8WVN8 375 aa7.49□□□□□ -1.21
CHMP3-206ENST00000466032 MYD88Q99836 296 aa7.49□□□□□ -1.21
CHMP3-206ENST00000466032 ISCA1Q9BUE6 129 aa7.49□□□□□ -1.21
CHMP3-206ENST00000466032 NYXQ9GZU5 481 aa7.49□□□□□ -1.21
CHMP3-206ENST00000466032 USP44Q9H0E7 712 aa7.49□□□□□ -1.21
CHMP3-206ENST00000466032 TSHZ2Q9NRE2 1034 aa7.49□□□□□ -1.21
CHMP3-206ENST00000466032 COL5A3P25940 1745 aaPredicted RBP7.49□□□□□ -1.21
CHMP3-206ENST00000466032 AXIN1O15169 862 aa7.48□□□□□ -1.21
CHMP3-206ENST00000466032 PCCAP05165 728 aaPredicted RBP7.48□□□□□ -1.21
CHMP3-206ENST00000466032 RFC4P35249 363 aa7.48□□□□□ -1.21
CHMP3-206ENST00000466032 MTX1Q13505 466 aa7.48□□□□□ -1.21
CHMP3-206ENST00000466032 ZNF697Q5TEC3 545 aa7.48□□□□□ -1.21
CHMP3-206ENST00000466032 ANKRD44Q8N8A2 993 aa7.48□□□□□ -1.21
CHMP3-206ENST00000466032 ZBTB38Q8NAP3 1195 aaPredicted RBP7.48□□□□□ -1.21
CHMP3-206ENST00000466032 ARXQ96QS3 562 aa7.48□□□□□ -1.21
CHMP3-206ENST00000466032 GPHNQ9NQX3 736 aaPredicted RBP7.48□□□□□ -1.21
CHMP3-206ENST00000466032 FBXO3Q9UK99 471 aa7.48□□□□□ -1.21
CHMP3-206ENST00000466032 ZNF330Q9Y3S2 320 aaPredicted RBP7.48□□□□□ -1.21
CHMP3-206ENST00000466032 CDHR2Q9BYE9 1310 aa7.48□□□□□ -1.21
CHMP3-206ENST00000466032 H7C1W4 665 aa7.47□□□□□ -1.21
CHMP3-206ENST00000466032 RIOK3O14730 519 aaKnown RBP7.47□□□□□ -1.21
CHMP3-206ENST00000466032 GNPATO15228 680 aa7.47□□□□□ -1.21
CHMP3-206ENST00000466032 IGKV5-2P06315 115 aa7.47□□□□□ -1.21
CHMP3-206ENST00000466032 SNRPBP14678 240 aaKnown RBP7.47□□□□□ -1.21
CHMP3-206ENST00000466032 ATP8B2P98198 1209 aa7.47□□□□□ -1.21
CHMP3-206ENST00000466032 TTLL7Q6ZT98 887 aa7.47□□□□□ -1.21
CHMP3-206ENST00000466032 ZNF34Q8IZ26 560 aa7.47□□□□□ -1.21
CHMP3-206ENST00000466032 MEIS3Q99687 375 aa7.47□□□□□ -1.21
CHMP3-206ENST00000466032 PLA2G12BQ9BX93 195 aa7.47□□□□□ -1.21
CHMP3-206ENST00000466032 ZBTB3Q9H5J0 574 aa7.47□□□□□ -1.21
CHMP3-206ENST00000466032 C4BP0C0L5 1744 aa7.47□□□□□ -1.21
CHMP3-206ENST00000466032 TAF1LQ8IZX4 1826 aa7.46□□□□□ -1.21
CHMP3-206ENST00000466032 RAB11FIP3O75154 756 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 CAMTA2O94983 1202 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 DSG2Q14126 1118 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 CEP85Q6P2H3 762 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 TPTE2Q6XPS3 522 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 NLRP10Q86W26 655 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 ERC1Q8IUD2 1116 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 NLGN1Q8N2Q7 840 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 SLC16A10Q8TF71 515 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 CAMKK2Q96RR4 588 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms