RNA–Protein interactions for RNA: ENST00000465997.1

SNX21-207, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-207ENST00000465997 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
SNX21-207ENST00000465997 C9orf78Q9NZ63 289 aaPredicted RBP17.55■□□□□ 0.4
SNX21-207ENST00000465997 CLEC11AQ9Y240 323 aa17.55■□□□□ 0.4
SNX21-207ENST00000465997 COL4A1P02462 1669 aa17.55■□□□□ 0.4
SNX21-207ENST00000465997 RIMBP2O15034 1052 aa17.54■□□□□ 0.4
SNX21-207ENST00000465997 UFL1O94874 794 aa17.54■□□□□ 0.4
SNX21-207ENST00000465997 ITGA6P23229 1130 aa17.54■□□□□ 0.4
SNX21-207ENST00000465997 SLC4A10Q6U841 1118 aa17.54■□□□□ 0.4
SNX21-207ENST00000465997 MIER1Q8N108 512 aa17.54■□□□□ 0.4
SNX21-207ENST00000465997 DNAJC5GQ8N7S2 189 aa17.54■□□□□ 0.4
SNX21-207ENST00000465997 SSH1Q8WYL5 1049 aa17.54■□□□□ 0.4
SNX21-207ENST00000465997 MPHOSPH8Q99549 860 aa17.54■□□□□ 0.4
SNX21-207ENST00000465997 ANKRD2Q9GZV1 360 aa17.54■□□□□ 0.4
SNX21-207ENST00000465997 ADARB2Q9NS39 739 aaKnown RBP17.54■□□□□ 0.4
SNX21-207ENST00000465997 GPRC5DQ9NZD1 345 aa17.54■□□□□ 0.4
SNX21-207ENST00000465997 MINPP1Q9UNW1 487 aa17.54■□□□□ 0.4
SNX21-207ENST00000465997 ANKRD18BA2A2Z9 1011 aa17.53■□□□□ 0.4
SNX21-207ENST00000465997 G3V3G9 751 aa17.53■□□□□ 0.4
SNX21-207ENST00000465997 POTEIP0CG38 1075 aa17.53■□□□□ 0.4
SNX21-207ENST00000465997 POTEJP0CG39 1038 aa17.53■□□□□ 0.4
SNX21-207ENST00000465997 DCAF8Q5TAQ9 597 aa17.53■□□□□ 0.4
SNX21-207ENST00000465997 DPF2Q92785 391 aa17.53■□□□□ 0.4
SNX21-207ENST00000465997 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
SNX21-207ENST00000465997 ADAMTSL1Q8N6G6 1762 aa17.53■□□□□ 0.4
SNX21-207ENST00000465997 YDJCA8MPS7 323 aa17.52■□□□□ 0.4
SNX21-207ENST00000465997 ECE2O60344 883 aa17.52■□□□□ 0.4
SNX21-207ENST00000465997 RAD17O75943 681 aa17.52■□□□□ 0.4
SNX21-207ENST00000465997 RPS12P25398 132 aaKnown RBP17.52■□□□□ 0.4
SNX21-207ENST00000465997 EPS15P42566 896 aa17.52■□□□□ 0.4
SNX21-207ENST00000465997 GMPSP49915 693 aaPredicted RBP17.52■□□□□ 0.4
SNX21-207ENST00000465997 FOXO4P98177 505 aa17.52■□□□□ 0.4
SNX21-207ENST00000465997 IFIT5Q13325 482 aaKnown RBP17.52■□□□□ 0.4
SNX21-207ENST00000465997 DBNDD1Q9H9R9 158 aa17.52■□□□□ 0.4
SNX21-207ENST00000465997 LEMD3Q9Y2U8 911 aa17.52■□□□□ 0.4
SNX21-207ENST00000465997 UTYO14607 1347 aa17.51■□□□□ 0.39
SNX21-207ENST00000465997 H7C1D1 291 aa17.51■□□□□ 0.39
SNX21-207ENST00000465997 ITGBL1O95965 494 aaPredicted RBP17.51■□□□□ 0.39
SNX21-207ENST00000465997 BRPF1P55201 1214 aaPredicted RBP17.51■□□□□ 0.39
SNX21-207ENST00000465997 FAM161AQ3B820 660 aa17.51■□□□□ 0.39
SNX21-207ENST00000465997 PODNQ7Z5L7 613 aa17.51■□□□□ 0.39
SNX21-207ENST00000465997 PASKQ96RG2 1323 aa17.5■□□□□ 0.39
SNX21-207ENST00000465997 CCT4P50991 539 aaKnown RBP17.5■□□□□ 0.39
SNX21-207ENST00000465997 DOK7Q18PE1 504 aa17.5■□□□□ 0.39
SNX21-207ENST00000465997 CNTROBQ8N137 903 aa17.5■□□□□ 0.39
SNX21-207ENST00000465997 ZC3H15Q8WU90 426 aaKnown RBP17.5■□□□□ 0.39
SNX21-207ENST00000465997 KLRG1Q96E93 195 aa17.5■□□□□ 0.39
SNX21-207ENST00000465997 CREBZFQ9NS37 354 aa17.5■□□□□ 0.39
SNX21-207ENST00000465997 SMC4Q9NTJ3 1288 aa17.5■□□□□ 0.39
SNX21-207ENST00000465997 MED23Q9ULK4 1368 aa17.5■□□□□ 0.39
SNX21-207ENST00000465997 PSMD14O00487 310 aa17.49■□□□□ 0.39
SNX21-207ENST00000465997 CCDC57Q2TAC2 916 aa17.49■□□□□ 0.39
SNX21-207ENST00000465997 LMBR1LQ6UX01 489 aa17.49■□□□□ 0.39
SNX21-207ENST00000465997 CNOT7Q9UIV1 285 aaKnown RBP17.49■□□□□ 0.39
SNX21-207ENST00000465997 VIL1P09327 827 aaKnown RBP17.48■□□□□ 0.39
SNX21-207ENST00000465997 PGAP2Q9UHJ9 254 aa17.48■□□□□ 0.39
SNX21-207ENST00000465997 MAP1SQ66K74 1059 aaPredicted RBP17.47■□□□□ 0.39
SNX21-207ENST00000465997 AGBL3Q8NEM8 1001 aa17.47■□□□□ 0.39
SNX21-207ENST00000465997 CHMP3Q9Y3E7 222 aa17.47■□□□□ 0.39
SNX21-207ENST00000465997 ZNF609O15014 1411 aa17.47■□□□□ 0.39
SNX21-207ENST00000465997 ZNF804BA4D1E1 1349 aa17.47■□□□□ 0.39
SNX21-207ENST00000465997 TMEM88BA6NKF7 163 aa17.46■□□□□ 0.39
SNX21-207ENST00000465997 NBPF7P0C2Y1 421 aaPredicted RBP17.46■□□□□ 0.39
SNX21-207ENST00000465997 TAF7LQ5H9L4 462 aa17.46■□□□□ 0.39
SNX21-207ENST00000465997 JMYQ8N9B5 988 aa17.46■□□□□ 0.39
SNX21-207ENST00000465997 GPR101Q96P66 508 aaPredicted RBP17.46■□□□□ 0.39
SNX21-207ENST00000465997 API5Q9BZZ5 524 aaKnown RBP17.46■□□□□ 0.39
SNX21-207ENST00000465997 COA1Q9GZY4 146 aa17.46■□□□□ 0.39
SNX21-207ENST00000465997 HDAC5Q9UQL6 1122 aa17.46■□□□□ 0.39
SNX21-207ENST00000465997 CEP350Q5VT06 3117 aa17.46■□□□□ 0.39
SNX21-207ENST00000465997 SPEF2Q9C093 1822 aa17.45■□□□□ 0.38
SNX21-207ENST00000465997 KCNJ4P48050 445 aa17.45■□□□□ 0.38
SNX21-207ENST00000465997 MMP14P50281 582 aa17.45■□□□□ 0.38
SNX21-207ENST00000465997 HTRA3P83110 453 aa17.45■□□□□ 0.38
SNX21-207ENST00000465997 CHRNDQ07001 517 aa17.45■□□□□ 0.38
SNX21-207ENST00000465997 EPHA10Q5JZY3 1008 aa17.45■□□□□ 0.38
SNX21-207ENST00000465997 LDHAL6AQ6ZMR3 332 aa17.45■□□□□ 0.38
SNX21-207ENST00000465997 MICALL2Q8IY33 904 aa17.45■□□□□ 0.38
SNX21-207ENST00000465997 ARHGAP45Q92619 1136 aa17.45■□□□□ 0.38
SNX21-207ENST00000465997 USP17L3A6NCW0 530 aa17.44■□□□□ 0.38
SNX21-207ENST00000465997 USP17L4A6NCW7 530 aa17.44■□□□□ 0.38
SNX21-207ENST00000465997 RARSP54136 660 aaKnown RBP17.44■□□□□ 0.38
SNX21-207ENST00000465997 RABL6Q3YEC7 729 aaPredicted RBP17.44■□□□□ 0.38
SNX21-207ENST00000465997 RSBN1LQ6PCB5 846 aaPredicted RBP17.44■□□□□ 0.38
SNX21-207ENST00000465997 C15orf52Q6ZUT6 534 aaKnown RBP17.44■□□□□ 0.38
SNX21-207ENST00000465997 USP17L1Q7RTZ2 530 aa17.44■□□□□ 0.38
SNX21-207ENST00000465997 SUCLG2Q96I99 432 aa17.44■□□□□ 0.38
SNX21-207ENST00000465997 KCNQ5Q9NR82 932 aa17.44■□□□□ 0.38
SNX21-207ENST00000465997 ZBTB12Q9Y330 459 aaPredicted RBP17.44■□□□□ 0.38
SNX21-207ENST00000465997 KAZALD1Q96I82 304 aa17.43■□□□□ 0.38
SNX21-207ENST00000465997 USP44Q9H0E7 712 aa17.43■□□□□ 0.38
SNX21-207ENST00000465997 NOB1Q9ULX3 412 aaKnown RBP17.43■□□□□ 0.38
SNX21-207ENST00000465997 KIF16BQ96L93 1317 aa17.43■□□□□ 0.38
SNX21-207ENST00000465997 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
SNX21-207ENST00000465997 CNNM1Q9NRU3 951 aa17.42■□□□□ 0.38
SNX21-207ENST00000465997 MYO3BQ8WXR4 1341 aa17.42■□□□□ 0.38
SNX21-207ENST00000465997 PSME4Q14997 1843 aa17.42■□□□□ 0.38
SNX21-207ENST00000465997 IPO8O15397 1037 aaKnown RBP17.41■□□□□ 0.38
SNX21-207ENST00000465997 HIRAP54198 1017 aaPredicted RBP17.41■□□□□ 0.38
SNX21-207ENST00000465997 STRIP1Q5VSL9 837 aa17.41■□□□□ 0.38
SNX21-207ENST00000465997 CDC37L1Q7L3B6 337 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms