RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 GPSM2P81274 684 aa15.4■□□□□ 0.06
CNOT4-208ENST00000465721 RGMBQ6NW40 437 aa15.4■□□□□ 0.06
CNOT4-208ENST00000465721 PLBD2Q8NHP8 589 aa15.4■□□□□ 0.06
CNOT4-208ENST00000465721 FAM89AQ96GI7 184 aa15.4■□□□□ 0.06
CNOT4-208ENST00000465721 GBA2Q9HCG7 927 aaPredicted RBP15.4■□□□□ 0.06
CNOT4-208ENST00000465721 KCNQ5Q9NR82 932 aa15.4■□□□□ 0.06
CNOT4-208ENST00000465721 CFAP44Q96MT7 982 aa15.39■□□□□ 0.05
CNOT4-208ENST00000465721 SAGE1Q9NXZ1 904 aa15.39■□□□□ 0.05
CNOT4-208ENST00000465721 NSFL1CQ9UNZ2 370 aaKnown RBP15.39■□□□□ 0.05
CNOT4-208ENST00000465721 RIMBP2O15034 1052 aa15.38■□□□□ 0.05
CNOT4-208ENST00000465721 HOXB7P09629 217 aa15.38■□□□□ 0.05
CNOT4-208ENST00000465721 HDGFL1Q5TGJ6 251 aa15.38■□□□□ 0.05
CNOT4-208ENST00000465721 TBC1D16Q8TBP0 767 aa15.38■□□□□ 0.05
CNOT4-208ENST00000465721 GGA3Q9NZ52 723 aa15.38■□□□□ 0.05
CNOT4-208ENST00000465721 ATP5J2-PTCD1G3V325 749 aa15.37■□□□□ 0.05
CNOT4-208ENST00000465721 C6orf229H3BNL8 230 aa15.37■□□□□ 0.05
CNOT4-208ENST00000465721 SLC10A3P09131 477 aa15.37■□□□□ 0.05
CNOT4-208ENST00000465721 KIF23Q02241 960 aaPredicted RBP15.37■□□□□ 0.05
CNOT4-208ENST00000465721 DOK7Q18PE1 504 aa15.37■□□□□ 0.05
CNOT4-208ENST00000465721 KIF4BQ2VIQ3 1234 aa15.37■□□□□ 0.05
CNOT4-208ENST00000465721 ANKRD13DQ6ZTN6 518 aa15.37■□□□□ 0.05
CNOT4-208ENST00000465721 C2orf69Q8N8R5 385 aa15.37■□□□□ 0.05
CNOT4-208ENST00000465721 DCPSQ96C86 337 aaKnown RBP15.37■□□□□ 0.05
CNOT4-208ENST00000465721 TRIM35Q9UPQ4 493 aa15.37■□□□□ 0.05
CNOT4-208ENST00000465721 ASTN2O75129 1339 aaPredicted RBP15.37■□□□□ 0.05
CNOT4-208ENST00000465721 HTTP42858 3142 aa15.37■□□□□ 0.05
CNOT4-208ENST00000465721 VIL1P09327 827 aaKnown RBP15.36■□□□□ 0.05
CNOT4-208ENST00000465721 RTL5Q5HYW3 569 aaPredicted RBP15.36■□□□□ 0.05
CNOT4-208ENST00000465721 CCDC102AQ96A19 550 aa15.36■□□□□ 0.05
CNOT4-208ENST00000465721 EYA3Q99504 573 aa15.36■□□□□ 0.05
CNOT4-208ENST00000465721 LAMB1P07942 1786 aa15.35■□□□□ 0.05
CNOT4-208ENST00000465721 IRS4O14654 1257 aaPredicted RBP15.35■□□□□ 0.05
CNOT4-208ENST00000465721 ZNF157P51786 506 aaPredicted RBP15.35■□□□□ 0.05
CNOT4-208ENST00000465721 TRIM28Q13263 835 aaKnown RBP15.35■□□□□ 0.05
CNOT4-208ENST00000465721 RBM26Q5T8P6 1007 aaKnown RBP15.35■□□□□ 0.05
CNOT4-208ENST00000465721 CCDC146Q8IYE0 955 aa15.35■□□□□ 0.05
CNOT4-208ENST00000465721 RNF186Q9NXI6 227 aa15.35■□□□□ 0.05
CNOT4-208ENST00000465721 PODXL2Q9NZ53 605 aa15.35■□□□□ 0.05
CNOT4-208ENST00000465721 DBF4Q9UBU7 674 aaPredicted RBP15.35■□□□□ 0.05
CNOT4-208ENST00000465721 RPS8P62241 208 aaKnown RBP15.34■□□□□ 0.05
CNOT4-208ENST00000465721 RALBP1Q15311 655 aa15.34■□□□□ 0.05
CNOT4-208ENST00000465721 NEUROD2Q15784 382 aa15.34■□□□□ 0.05
CNOT4-208ENST00000465721 SULF1Q8IWU6 871 aa15.34■□□□□ 0.05
CNOT4-208ENST00000465721 CDCA5Q96FF9 252 aa15.34■□□□□ 0.05
CNOT4-208ENST00000465721 LAS1LQ9Y4W2 734 aaKnown RBP15.34■□□□□ 0.05
CNOT4-208ENST00000465721 ECM29Q5VYK3 1845 aa15.33■□□□□ 0.05
CNOT4-208ENST00000465721 TRPA1O75762 1119 aa15.33■□□□□ 0.04
CNOT4-208ENST00000465721 UFL1O94874 794 aa15.33■□□□□ 0.04
CNOT4-208ENST00000465721 MYCNP04198 464 aaPredicted RBP15.33■□□□□ 0.04
CNOT4-208ENST00000465721 ZNF280AP59817 542 aaPredicted RBP15.33■□□□□ 0.04
CNOT4-208ENST00000465721 RASAL3Q86YV0 1011 aa15.33■□□□□ 0.04
CNOT4-208ENST00000465721 CSRNP1Q96S65 589 aa15.33■□□□□ 0.04
CNOT4-208ENST00000465721 SEC31BQ9NQW1 1179 aa15.33■□□□□ 0.04
CNOT4-208ENST00000465721 HYPKQ9NX55 129 aa15.33■□□□□ 0.04
CNOT4-208ENST00000465721 A0A1B0GUL6 1792 aa15.32■□□□□ 0.04
CNOT4-208ENST00000465721 SOX10P56693 466 aa15.32■□□□□ 0.04
CNOT4-208ENST00000465721 ZC3H12CQ9C0D7 883 aaKnown RBP15.32■□□□□ 0.04
CNOT4-208ENST00000465721 CENPFP49454 3210 aa15.32■□□□□ 0.04
CNOT4-208ENST00000465721 MKI67P46013 3256 aaKnown RBP15.32■□□□□ 0.04
CNOT4-208ENST00000465721 ANGEL2Q5VTE6 544 aaKnown RBP15.31■□□□□ 0.04
CNOT4-208ENST00000465721 DUSP27Q5VZP5 1158 aa15.31■□□□□ 0.04
CNOT4-208ENST00000465721 RSBN1LQ6PCB5 846 aaPredicted RBP15.31■□□□□ 0.04
CNOT4-208ENST00000465721 ZBTB38Q8NAP3 1195 aaPredicted RBP15.31■□□□□ 0.04
CNOT4-208ENST00000465721 RUNDC1Q96C34 613 aa15.31■□□□□ 0.04
CNOT4-208ENST00000465721 GMLQ99445 158 aa15.31■□□□□ 0.04
CNOT4-208ENST00000465721 AGBL3Q8NEM8 1001 aa15.3■□□□□ 0.04
CNOT4-208ENST00000465721 MYBBP1AQ9BQG0 1328 aaKnown RBP15.3■□□□□ 0.04
CNOT4-208ENST00000465721 PITPNM2Q9BZ72 1349 aa15.3■□□□□ 0.04
CNOT4-208ENST00000465721 MBIPQ9NS73 344 aa15.3■□□□□ 0.04
CNOT4-208ENST00000465721 ANKIB1Q9P2G1 1089 aa15.3■□□□□ 0.04
CNOT4-208ENST00000465721 GGA1Q9UJY5 639 aa15.3■□□□□ 0.04
CNOT4-208ENST00000465721 FKBP1BP68106 108 aa15.29■□□□□ 0.04
CNOT4-208ENST00000465721 GOLGA2Q08379 1002 aa15.29■□□□□ 0.04
CNOT4-208ENST00000465721 SCARF1Q14162 830 aa15.29■□□□□ 0.04
CNOT4-208ENST00000465721 CTU1Q7Z7A3 348 aaKnown RBP15.29■□□□□ 0.04
CNOT4-208ENST00000465721 XDHP47989 1333 aa15.28■□□□□ 0.04
CNOT4-208ENST00000465721 PCCAP05165 728 aaPredicted RBP15.28■□□□□ 0.04
CNOT4-208ENST00000465721 CCDC152Q4G0S7 254 aa15.28■□□□□ 0.04
CNOT4-208ENST00000465721 RIC3Q7Z5B4 369 aa15.28■□□□□ 0.04
CNOT4-208ENST00000465721 PHAXQ9H814 394 aaKnown RBP15.28■□□□□ 0.04
CNOT4-208ENST00000465721 MYOZ2Q9NPC6 264 aa15.28■□□□□ 0.04
CNOT4-208ENST00000465721 PCDH10Q9P2E7 1040 aa15.28■□□□□ 0.04
CNOT4-208ENST00000465721 CACNA1FO60840 1977 aa15.27■□□□□ 0.04
CNOT4-208ENST00000465721 BRCA2P51587 3418 aa15.27■□□□□ 0.04
CNOT4-208ENST00000465721 G3V3G9 751 aa15.27■□□□□ 0.04
CNOT4-208ENST00000465721 PDE8AO60658 829 aa15.27■□□□□ 0.04
CNOT4-208ENST00000465721 ZNF853P0CG23 659 aa15.27■□□□□ 0.04
CNOT4-208ENST00000465721 HSP90B1P14625 803 aaKnown RBP15.27■□□□□ 0.04
CNOT4-208ENST00000465721 DCAF8Q5TAQ9 597 aa15.27■□□□□ 0.04
CNOT4-208ENST00000465721 REM2Q8IYK8 340 aaPredicted RBP15.27■□□□□ 0.04
CNOT4-208ENST00000465721 CCDC191Q8NCU4 936 aa15.27■□□□□ 0.04
CNOT4-208ENST00000465721 MYD88Q99836 296 aa15.27■□□□□ 0.04
CNOT4-208ENST00000465721 RBBP6Q7Z6E9 1792 aaKnown RBP15.26■□□□□ 0.03
CNOT4-208ENST00000465721 MED23Q9ULK4 1368 aa15.26■□□□□ 0.03
CNOT4-208ENST00000465721 USP17L8P0C7I0 530 aa15.26■□□□□ 0.03
CNOT4-208ENST00000465721 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
CNOT4-208ENST00000465721 MOB2Q70IA6 237 aa15.26■□□□□ 0.03
CNOT4-208ENST00000465721 CCDC85AQ96PX6 553 aaPredicted RBP15.26■□□□□ 0.03
CNOT4-208ENST00000465721 SCAF8Q9UPN6 1271 aaKnown RBP15.26■□□□□ 0.03
CNOT4-208ENST00000465721 KIAA0100Q14667 2235 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms