RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 IREB2P48200 963 aaKnown RBP6.04□□□□□ -1.44
SNX4-202ENST00000465505 PIK3R5Q8WYR1 880 aa6.04□□□□□ -1.44
SNX4-202ENST00000465505 UBAP1LF5GYI3 381 aa6.03□□□□□ -1.44
SNX4-202ENST00000465505 GHRHP01286 108 aa6.03□□□□□ -1.44
SNX4-202ENST00000465505 GDF6Q6KF10 455 aaPredicted RBP6.03□□□□□ -1.44
SNX4-202ENST00000465505 IL22RA1Q8N6P7 574 aa6.03□□□□□ -1.44
SNX4-202ENST00000465505 OR13H1Q8NG92 308 aa6.03□□□□□ -1.44
SNX4-202ENST00000465505 PBXIP1Q96AQ6 731 aa6.03□□□□□ -1.44
SNX4-202ENST00000465505 FAM13BQ9NYF5 915 aa6.03□□□□□ -1.44
SNX4-202ENST00000465505 STIM2Q9P246 746 aa6.03□□□□□ -1.44
SNX4-202ENST00000465505 ZAP70P43403 619 aa6.02□□□□□ -1.45
SNX4-202ENST00000465505 COL13A1Q5TAT6 717 aaPredicted RBP6.02□□□□□ -1.45
SNX4-202ENST00000465505 TMEM130Q8N3G9 435 aa6.02□□□□□ -1.45
SNX4-202ENST00000465505 GPR152Q8TDT2 470 aa6.02□□□□□ -1.45
SNX4-202ENST00000465505 RBSNQ9H1K0 784 aa6.02□□□□□ -1.45
SNX4-202ENST00000465505 TTBK1Q5TCY1 1321 aaPredicted RBP6.01□□□□□ -1.45
SNX4-202ENST00000465505 SETDB1Q15047 1291 aa6.01□□□□□ -1.45
SNX4-202ENST00000465505 MEGF10Q96KG7 1140 aa6.01□□□□□ -1.45
SNX4-202ENST00000465505 SERPINA10Q9UK55 444 aa6.01□□□□□ -1.45
SNX4-202ENST00000465505 TRIM33Q9UPN9 1127 aa6.01□□□□□ -1.45
SNX4-202ENST00000465505 FNDC3AQ9Y2H6 1198 aaKnown RBP6.01□□□□□ -1.45
SNX4-202ENST00000465505 ARTNQ5T4W7 220 aa6□□□□□ -1.45
SNX4-202ENST00000465505 DZIP1LQ8IYY4 767 aaKnown RBP6□□□□□ -1.45
SNX4-202ENST00000465505 CACTIN-AS1Q8N1I8 211 aa6□□□□□ -1.45
SNX4-202ENST00000465505 CCDC97Q96F63 343 aaPredicted RBP6□□□□□ -1.45
SNX4-202ENST00000465505 SEPT3Q9UH03 358 aa6□□□□□ -1.45
SNX4-202ENST00000465505 SCO2A0A1W2PP80 73 aa5.99□□□□□ -1.45
SNX4-202ENST00000465505 ALX3O95076 343 aa5.99□□□□□ -1.45
SNX4-202ENST00000465505 ATP2B4P23634 1241 aa5.99□□□□□ -1.45
SNX4-202ENST00000465505 HYAL2Q12891 473 aa5.99□□□□□ -1.45
SNX4-202ENST00000465505 TTC39BQ5VTQ0 682 aaPredicted RBP5.99□□□□□ -1.45
SNX4-202ENST00000465505 MRPL18Q9H0U6 180 aaKnown RBP5.99□□□□□ -1.45
SNX4-202ENST00000465505 AKTIPQ9H8T0 292 aa5.99□□□□□ -1.45
SNX4-202ENST00000465505 SRA1Q9HD15 236 aaKnown RBP5.99□□□□□ -1.45
SNX4-202ENST00000465505 PPME1Q9Y570 386 aa5.99□□□□□ -1.45
SNX4-202ENST00000465505 F8W735 103 aaPredicted RBP5.98□□□□□ -1.45
SNX4-202ENST00000465505 KIF4AO95239 1232 aa5.98□□□□□ -1.45
SNX4-202ENST00000465505 CYP2E1P05181 493 aaPredicted RBP5.98□□□□□ -1.45
SNX4-202ENST00000465505 ATP11AP98196 1134 aa5.98□□□□□ -1.45
SNX4-202ENST00000465505 ADAMTSL4Q6UY14 1074 aa5.98□□□□□ -1.45
SNX4-202ENST00000465505 MAP4K3Q8IVH8 894 aa5.98□□□□□ -1.45
SNX4-202ENST00000465505 ABTB2Q8N961 1025 aa5.98□□□□□ -1.45
SNX4-202ENST00000465505 MUC3BQ9H195 1237 aa5.98□□□□□ -1.45
SNX4-202ENST00000465505 ZFP64Q9NPA5 681 aa5.98□□□□□ -1.45
SNX4-202ENST00000465505 ABI2Q9NYB9 513 aaPredicted RBP5.98□□□□□ -1.45
SNX4-202ENST00000465505 ARID3CA6NKF2 412 aa5.97□□□□□ -1.45
SNX4-202ENST00000465505 TM4SF5O14894 197 aa5.97□□□□□ -1.45
SNX4-202ENST00000465505 SCNN1AP37088 669 aa5.97□□□□□ -1.45
SNX4-202ENST00000465505 CEP135Q66GS9 1140 aa5.97□□□□□ -1.45
SNX4-202ENST00000465505 PRR23CQ6ZRP0 262 aa5.97□□□□□ -1.45
SNX4-202ENST00000465505 ATCAYQ86WG3 371 aa5.97□□□□□ -1.45
SNX4-202ENST00000465505 CEP120Q8N960 986 aa5.97□□□□□ -1.45
SNX4-202ENST00000465505 GALNT11Q8NCW6 608 aa5.97□□□□□ -1.45
SNX4-202ENST00000465505 NUDT16Q96DE0 195 aaKnown RBP5.97□□□□□ -1.45
SNX4-202ENST00000465505 SPACA7Q96KW9 195 aa5.97□□□□□ -1.45
SNX4-202ENST00000465505 ELP3Q9H9T3 547 aa5.97□□□□□ -1.45
SNX4-202ENST00000465505 LINC01387J3KSC0 135 aa5.96□□□□□ -1.46
SNX4-202ENST00000465505 PDE12Q6L8Q7 609 aaKnown RBP5.96□□□□□ -1.46
SNX4-202ENST00000465505 Q6ZS46 218 aa5.96□□□□□ -1.46
SNX4-202ENST00000465505 DCAF11Q8TEB1 546 aa5.96□□□□□ -1.46
SNX4-202ENST00000465505 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
SNX4-202ENST00000465505 PBX4Q9BYU1 374 aa5.96□□□□□ -1.46
SNX4-202ENST00000465505 LACRTQ9GZZ8 138 aa5.96□□□□□ -1.46
SNX4-202ENST00000465505 RASSF4Q9H2L5 321 aa5.96□□□□□ -1.46
SNX4-202ENST00000465505 TMEM63CQ9P1W3 806 aa5.96□□□□□ -1.46
SNX4-202ENST00000465505 HYAL3O43820 417 aaPredicted RBP5.95□□□□□ -1.46
SNX4-202ENST00000465505 SMNDC1O75940 238 aaKnown RBP eCLIP5.95□□□□□ -1.46
SNX4-202ENST00000465505 CDC27P30260 824 aa5.95□□□□□ -1.46
SNX4-202ENST00000465505 XKR5Q6UX68 686 aa5.95□□□□□ -1.46
SNX4-202ENST00000465505 POP1Q99575 1024 aaKnown RBP5.95□□□□□ -1.46
SNX4-202ENST00000465505 CNTN3Q9P232 1028 aa5.95□□□□□ -1.46
SNX4-202ENST00000465505 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.95□□□□□ -1.46
SNX4-202ENST00000465505 LRP8Q14114 963 aa5.94□□□□□ -1.46
SNX4-202ENST00000465505 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.94□□□□□ -1.46
SNX4-202ENST00000465505 NCAPG2Q86XI2 1143 aa5.94□□□□□ -1.46
SNX4-202ENST00000465505 AGGF1Q8N302 714 aaeCLIP5.94□□□□□ -1.46
SNX4-202ENST00000465505 HELQQ8TDG4 1101 aa5.94□□□□□ -1.46
SNX4-202ENST00000465505 UBL7Q96S82 380 aaPredicted RBP5.94□□□□□ -1.46
SNX4-202ENST00000465505 GGNBP2Q9H3C7 697 aa5.94□□□□□ -1.46
SNX4-202ENST00000465505 KCNK4Q9NYG8 393 aa5.94□□□□□ -1.46
SNX4-202ENST00000465505 SALL4Q9UJQ4 1053 aa5.94□□□□□ -1.46
SNX4-202ENST00000465505 TMEM88BA6NKF7 163 aa5.93□□□□□ -1.46
SNX4-202ENST00000465505 RPLP1P05386 114 aaKnown RBP5.93□□□□□ -1.46
SNX4-202ENST00000465505 SSFA2P28290 1259 aa5.93□□□□□ -1.46
SNX4-202ENST00000465505 CD68P34810 354 aaPredicted RBP5.93□□□□□ -1.46
SNX4-202ENST00000465505 NOM1Q5C9Z4 860 aaKnown RBP5.93□□□□□ -1.46
SNX4-202ENST00000465505 TXNDC11Q6PKC3 985 aa5.93□□□□□ -1.46
SNX4-202ENST00000465505 ZNF438Q7Z4V0 828 aa5.93□□□□□ -1.46
SNX4-202ENST00000465505 SLC51AQ86UW1 340 aa5.93□□□□□ -1.46
SNX4-202ENST00000465505 EDEM1Q92611 657 aa5.93□□□□□ -1.46
SNX4-202ENST00000465505 PSMG3-AS1Q96PY0 264 aa5.93□□□□□ -1.46
SNX4-202ENST00000465505 ADAM19Q9H013 955 aa5.93□□□□□ -1.46
SNX4-202ENST00000465505 SH2B1Q9NRF2 756 aaPredicted RBP5.93□□□□□ -1.46
SNX4-202ENST00000465505 RNF112Q9ULX5 631 aa5.93□□□□□ -1.46
SNX4-202ENST00000465505 NFKBIEO00221 500 aa5.92□□□□□ -1.46
SNX4-202ENST00000465505 FSCN2O14926 492 aa5.92□□□□□ -1.46
SNX4-202ENST00000465505 WISP1O95388 367 aa5.92□□□□□ -1.46
SNX4-202ENST00000465505 EPHA1P21709 976 aa5.92□□□□□ -1.46
SNX4-202ENST00000465505 CDC25BP30305 580 aa5.92□□□□□ -1.46
SNX4-202ENST00000465505 DNM1Q05193 864 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms