RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 RTKN2Q8IZC4 609 aa18.24■□□□□ 0.51
HLA-F-223ENST00000465459 KLHDC4Q8TBB5 520 aa18.24■□□□□ 0.51
HLA-F-223ENST00000465459 RWDD1Q9H446 243 aaPredicted RBP18.24■□□□□ 0.51
HLA-F-223ENST00000465459 PA2G4Q9UQ80 394 aaKnown RBP18.24■□□□□ 0.51
HLA-F-223ENST00000465459 COL4A1P02462 1669 aa18.23■□□□□ 0.51
HLA-F-223ENST00000465459 C21orf2O43822 256 aa18.23■□□□□ 0.51
HLA-F-223ENST00000465459 SURF6O75683 361 aaKnown RBP18.23■□□□□ 0.51
HLA-F-223ENST00000465459 PODXL2Q9NZ53 605 aa18.23■□□□□ 0.51
HLA-F-223ENST00000465459 LRRC37AA6NMS7 1700 aa18.23■□□□□ 0.51
HLA-F-223ENST00000465459 ARFGEF1Q9Y6D6 1849 aa18.22■□□□□ 0.51
HLA-F-223ENST00000465459 LRRC24Q50LG9 513 aa18.22■□□□□ 0.51
HLA-F-223ENST00000465459 ATG9AQ7Z3C6 839 aa18.22■□□□□ 0.51
HLA-F-223ENST00000465459 ERC1Q8IUD2 1116 aa18.22■□□□□ 0.51
HLA-F-223ENST00000465459 PUS3Q9BZE2 481 aaKnown RBP18.22■□□□□ 0.51
HLA-F-223ENST00000465459 SIL1Q9H173 461 aa18.22■□□□□ 0.51
HLA-F-223ENST00000465459 DCTPP1Q9H773 170 aa18.22■□□□□ 0.51
HLA-F-223ENST00000465459 XDHP47989 1333 aa18.22■□□□□ 0.51
HLA-F-223ENST00000465459 RAB11FIP3O75154 756 aa18.21■□□□□ 0.51
HLA-F-223ENST00000465459 CHRNDQ07001 517 aa18.21■□□□□ 0.51
HLA-F-223ENST00000465459 MPNDQ8N594 471 aa18.21■□□□□ 0.51
HLA-F-223ENST00000465459 CEP126Q9P2H0 1117 aa18.21■□□□□ 0.51
HLA-F-223ENST00000465459 GRIN3BO60391 1043 aa18.2■□□□□ 0.5
HLA-F-223ENST00000465459 OS9Q13438 667 aaPredicted RBP18.2■□□□□ 0.5
HLA-F-223ENST00000465459 METTL24Q5JXM2 366 aa18.2■□□□□ 0.5
HLA-F-223ENST00000465459 DPP8Q6V1X1 898 aaPredicted RBP18.2■□□□□ 0.5
HLA-F-223ENST00000465459 PSMD1Q99460 953 aa18.2■□□□□ 0.5
HLA-F-223ENST00000465459 RTFDC1Q9BY42 306 aaPredicted RBP18.2■□□□□ 0.5
HLA-F-223ENST00000465459 ANKIB1Q9P2G1 1089 aa18.2■□□□□ 0.5
HLA-F-223ENST00000465459 NSFL1CQ9UNZ2 370 aaKnown RBP18.2■□□□□ 0.5
HLA-F-223ENST00000465459 LEMD3Q9Y2U8 911 aa18.2■□□□□ 0.5
HLA-F-223ENST00000465459 SNED1Q8TER0 1413 aa18.2■□□□□ 0.5
HLA-F-223ENST00000465459 CACNA1SQ13698 1873 aa18.2■□□□□ 0.5
HLA-F-223ENST00000465459 PDE8BO95263 885 aa18.19■□□□□ 0.5
HLA-F-223ENST00000465459 ATP2B4P23634 1241 aa18.19■□□□□ 0.5
HLA-F-223ENST00000465459 GPSM2P81274 684 aa18.19■□□□□ 0.5
HLA-F-223ENST00000465459 GPR162Q16538 588 aa18.19■□□□□ 0.5
HLA-F-223ENST00000465459 VGLL2Q8N8G2 317 aa18.19■□□□□ 0.5
HLA-F-223ENST00000465459 SUPT20HQ8NEM7 779 aa18.19■□□□□ 0.5
HLA-F-223ENST00000465459 GCC1Q96CN9 775 aa18.19■□□□□ 0.5
HLA-F-223ENST00000465459 ZNF219Q9P2Y4 722 aaPredicted RBP18.19■□□□□ 0.5
HLA-F-223ENST00000465459 WWC3Q9ULE0 1092 aa18.19■□□□□ 0.5
HLA-F-223ENST00000465459 LTBP3Q9NS15 1303 aa18.19■□□□□ 0.5
HLA-F-223ENST00000465459 YBX3P16989 372 aaKnown RBP eCLIP18.18■□□□□ 0.5
HLA-F-223ENST00000465459 VPS33BQ9H267 617 aa18.18■□□□□ 0.5
HLA-F-223ENST00000465459 GPR108Q9NPR9 543 aa18.18■□□□□ 0.5
HLA-F-223ENST00000465459 GGA1Q9UJY5 639 aa18.18■□□□□ 0.5
HLA-F-223ENST00000465459 EXOC6BQ9Y2D4 811 aa18.18■□□□□ 0.5
HLA-F-223ENST00000465459 SPEF2Q9C093 1822 aa18.18■□□□□ 0.5
HLA-F-223ENST00000465459 DCAF8L1A6NGE4 600 aa18.17■□□□□ 0.5
HLA-F-223ENST00000465459 SASH1O94885 1247 aa18.17■□□□□ 0.5
HLA-F-223ENST00000465459 FKBP4Q02790 459 aaKnown RBP eCLIP18.17■□□□□ 0.5
HLA-F-223ENST00000465459 UBE4AQ14139 1066 aa18.17■□□□□ 0.5
HLA-F-223ENST00000465459 OLFM4Q6UX06 510 aa18.17■□□□□ 0.5
HLA-F-223ENST00000465459 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
HLA-F-223ENST00000465459 KIF1BPQ96EK5 621 aa18.17■□□□□ 0.5
HLA-F-223ENST00000465459 AKAP2Q9Y2D5 859 aa18.17■□□□□ 0.5
HLA-F-223ENST00000465459 PUM3Q15397 648 aaKnown RBP18.16■□□□□ 0.5
HLA-F-223ENST00000465459 HELBQ8NG08 1087 aaPredicted RBP18.16■□□□□ 0.5
HLA-F-223ENST00000465459 TBC1D16Q8TBP0 767 aa18.16■□□□□ 0.5
HLA-F-223ENST00000465459 EYA3Q99504 573 aa18.16■□□□□ 0.5
HLA-F-223ENST00000465459 TAOK3Q9H2K8 898 aa18.16■□□□□ 0.5
HLA-F-223ENST00000465459 ZNF804BA4D1E1 1349 aa18.16■□□□□ 0.5
HLA-F-223ENST00000465459 LTBP1Q14766 1721 aa18.15■□□□□ 0.5
HLA-F-223ENST00000465459 TAF5LO75529 589 aa18.15■□□□□ 0.5
HLA-F-223ENST00000465459 UFL1O94874 794 aa18.15■□□□□ 0.5
HLA-F-223ENST00000465459 IGHDP01880 384 aa18.15■□□□□ 0.5
HLA-F-223ENST00000465459 KCNJ4P48050 445 aa18.15■□□□□ 0.5
HLA-F-223ENST00000465459 TFCP2Q12800 502 aa18.15■□□□□ 0.5
HLA-F-223ENST00000465459 C15orf52Q6ZUT6 534 aaKnown RBP18.15■□□□□ 0.5
HLA-F-223ENST00000465459 SMC5Q8IY18 1101 aa18.15■□□□□ 0.5
HLA-F-223ENST00000465459 RHPN1Q8TCX5 695 aa18.15■□□□□ 0.5
HLA-F-223ENST00000465459 LPIN2Q92539 896 aa18.15■□□□□ 0.5
HLA-F-223ENST00000465459 PPP4R2Q9NY27 417 aa18.15■□□□□ 0.5
HLA-F-223ENST00000465459 POLLQ9UGP5 575 aa18.15■□□□□ 0.5
HLA-F-223ENST00000465459 FER1L6Q2WGJ9 1857 aa18.14■□□□□ 0.49
HLA-F-223ENST00000465459 C6orf229H3BNL8 230 aa18.14■□□□□ 0.49
HLA-F-223ENST00000465459 NFKBIEO00221 500 aa18.14■□□□□ 0.49
HLA-F-223ENST00000465459 FGFR2P21802 821 aa18.14■□□□□ 0.49
HLA-F-223ENST00000465459 ARHGAP27Q6ZUM4 889 aa18.14■□□□□ 0.49
HLA-F-223ENST00000465459 SLC51AQ86UW1 340 aa18.14■□□□□ 0.49
HLA-F-223ENST00000465459 LRRCC1Q9C099 1032 aa18.14■□□□□ 0.49
HLA-F-223ENST00000465459 IFIT1P09914 478 aaKnown RBP18.13■□□□□ 0.49
HLA-F-223ENST00000465459 ATP2B3Q16720 1220 aa18.13■□□□□ 0.49
HLA-F-223ENST00000465459 MED23Q9ULK4 1368 aa18.13■□□□□ 0.49
HLA-F-223ENST00000465459 DUOX1Q9NRD9 1551 aa18.13■□□□□ 0.49
HLA-F-223ENST00000465459 A0A1B0GUL6 1792 aa18.12■□□□□ 0.49
HLA-F-223ENST00000465459 SLC5A1P13866 664 aa18.12■□□□□ 0.49
HLA-F-223ENST00000465459 WASHC4Q2M389 1173 aa18.12■□□□□ 0.49
HLA-F-223ENST00000465459 CLASRPQ8N2M8 674 aaKnown RBP18.12■□□□□ 0.49
HLA-F-223ENST00000465459 CCDC136Q96JN2 1154 aa18.12■□□□□ 0.49
HLA-F-223ENST00000465459 ZC3H12CQ9C0D7 883 aaKnown RBP18.12■□□□□ 0.49
HLA-F-223ENST00000465459 KIAA2012Q0VF49 1180 aa18.11■□□□□ 0.49
HLA-F-223ENST00000465459 TNNI3KQ59H18 835 aa18.11■□□□□ 0.49
HLA-F-223ENST00000465459 ZBTB47Q9UFB7 747 aaPredicted RBP18.11■□□□□ 0.49
HLA-F-223ENST00000465459 FPGT-TNNI3KV9GXZ4 949 aa18.11■□□□□ 0.49
HLA-F-223ENST00000465459 IRS2Q9Y4H2 1338 aa18.1■□□□□ 0.49
HLA-F-223ENST00000465459 A0A1B0GUL7 405 aa18.1■□□□□ 0.49
HLA-F-223ENST00000465459 LMNB1P20700 586 aa18.1■□□□□ 0.49
HLA-F-223ENST00000465459 IARSP41252 1262 aaKnown RBP18.1■□□□□ 0.49
HLA-F-223ENST00000465459 CENPQQ7L2Z9 268 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms