RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 COL11A2P13942 1736 aaPredicted RBP20.89■□□□□ 0.93
EXOSC3-203ENST00000465229 APBB1O00213 710 aa20.89■□□□□ 0.93
EXOSC3-203ENST00000465229 RAB11FIP3O75154 756 aa20.89■□□□□ 0.93
EXOSC3-203ENST00000465229 SASH1O94885 1247 aa20.89■□□□□ 0.93
EXOSC3-203ENST00000465229 IL15P40933 162 aaPredicted RBP20.89■□□□□ 0.93
EXOSC3-203ENST00000465229 FHDC1Q9C0D6 1143 aaPredicted RBP20.89■□□□□ 0.93
EXOSC3-203ENST00000465229 MINPP1Q9UNW1 487 aa20.88■□□□□ 0.93
EXOSC3-203ENST00000465229 SLC51AQ86UW1 340 aa20.87■□□□□ 0.93
EXOSC3-203ENST00000465229 NLGN2Q8NFZ4 835 aa20.87■□□□□ 0.93
EXOSC3-203ENST00000465229 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.87■□□□□ 0.93
EXOSC3-203ENST00000465229 PRPF40BQ6NWY9 871 aaKnown RBP20.86■□□□□ 0.93
EXOSC3-203ENST00000465229 ERC1Q8IUD2 1116 aa20.86■□□□□ 0.93
EXOSC3-203ENST00000465229 TTLL6Q8N841 843 aa20.86■□□□□ 0.93
EXOSC3-203ENST00000465229 RHPN1Q8TCX5 695 aa20.86■□□□□ 0.93
EXOSC3-203ENST00000465229 PPEF1O14829 653 aaPredicted RBP20.86■□□□□ 0.93
EXOSC3-203ENST00000465229 ANP32AP39687 249 aaKnown RBP20.86■□□□□ 0.93
EXOSC3-203ENST00000465229 CHRNDQ07001 517 aa20.86■□□□□ 0.93
EXOSC3-203ENST00000465229 TFCP2Q12800 502 aa20.86■□□□□ 0.93
EXOSC3-203ENST00000465229 ANKRD45Q5TZF3 282 aa20.86■□□□□ 0.93
EXOSC3-203ENST00000465229 KIF1BPQ96EK5 621 aa20.86■□□□□ 0.93
EXOSC3-203ENST00000465229 PIM2Q9P1W9 311 aa20.86■□□□□ 0.93
EXOSC3-203ENST00000465229 MROH5Q6ZUA9 1318 aa20.85■□□□□ 0.93
EXOSC3-203ENST00000465229 RGS3P49796 1198 aa20.85■□□□□ 0.93
EXOSC3-203ENST00000465229 METTL24Q5JXM2 366 aa20.85■□□□□ 0.93
EXOSC3-203ENST00000465229 TMC4Q7Z404 712 aa20.85■□□□□ 0.93
EXOSC3-203ENST00000465229 SP8Q8IXZ3 490 aa20.85■□□□□ 0.93
EXOSC3-203ENST00000465229 HELBQ8NG08 1087 aaPredicted RBP20.85■□□□□ 0.93
EXOSC3-203ENST00000465229 SYT17Q9BSW7 474 aa20.85■□□□□ 0.93
EXOSC3-203ENST00000465229 LRRCC1Q9C099 1032 aa20.85■□□□□ 0.93
EXOSC3-203ENST00000465229 CEP126Q9P2H0 1117 aa20.85■□□□□ 0.93
EXOSC3-203ENST00000465229 ATP6V0A2Q9Y487 856 aa20.85■□□□□ 0.93
EXOSC3-203ENST00000465229 LRP5O75197 1615 aa20.84■□□□□ 0.93
EXOSC3-203ENST00000465229 SMARCA5O60264 1052 aaPredicted RBP20.84■□□□□ 0.93
EXOSC3-203ENST00000465229 NUCB1Q02818 461 aa20.84■□□□□ 0.93
EXOSC3-203ENST00000465229 VGLL2Q8N8G2 317 aa20.84■□□□□ 0.93
EXOSC3-203ENST00000465229 C7orf43Q8WVR3 580 aa20.84■□□□□ 0.93
EXOSC3-203ENST00000465229 KIAA1551Q9HCM1 1747 aa20.84■□□□□ 0.93
EXOSC3-203ENST00000465229 OLFM4Q6UX06 510 aa20.83■□□□□ 0.93
EXOSC3-203ENST00000465229 IL1RAPL2Q9NP60 686 aa20.83■□□□□ 0.93
EXOSC3-203ENST00000465229 TAF5LO75529 589 aa20.82■□□□□ 0.92
EXOSC3-203ENST00000465229 PDE8BO95263 885 aa20.82■□□□□ 0.92
EXOSC3-203ENST00000465229 C8orf34Q49A92 452 aa20.82■□□□□ 0.92
EXOSC3-203ENST00000465229 DALRD3Q5D0E6 543 aaKnown RBP20.82■□□□□ 0.92
EXOSC3-203ENST00000465229 WWC3Q9ULE0 1092 aa20.82■□□□□ 0.92
EXOSC3-203ENST00000465229 SLX4Q8IY92 1834 aa20.81■□□□□ 0.92
EXOSC3-203ENST00000465229 CHD1LQ86WJ1 897 aa20.81■□□□□ 0.92
EXOSC3-203ENST00000465229 ANKRD2Q9GZV1 360 aa20.81■□□□□ 0.92
EXOSC3-203ENST00000465229 BCL11AQ9H165 835 aa20.81■□□□□ 0.92
EXOSC3-203ENST00000465229 ZNF219Q9P2Y4 722 aaPredicted RBP20.81■□□□□ 0.92
EXOSC3-203ENST00000465229 WTIPA6NIX2 430 aaPredicted RBP20.8■□□□□ 0.92
EXOSC3-203ENST00000465229 SNAP23O00161 211 aa20.8■□□□□ 0.92
EXOSC3-203ENST00000465229 GPSM2P81274 684 aa20.8■□□□□ 0.92
EXOSC3-203ENST00000465229 LNPKQ9C0E8 428 aa20.8■□□□□ 0.92
EXOSC3-203ENST00000465229 GPR108Q9NPR9 543 aa20.8■□□□□ 0.92
EXOSC3-203ENST00000465229 DLEC1Q9Y238 1755 aa20.8■□□□□ 0.92
EXOSC3-203ENST00000465229 C21orf2O43822 256 aa20.79■□□□□ 0.92
EXOSC3-203ENST00000465229 CLASRPQ8N2M8 674 aaKnown RBP20.79■□□□□ 0.92
EXOSC3-203ENST00000465229 EAF2Q96CJ1 260 aaPredicted RBP20.79■□□□□ 0.92
EXOSC3-203ENST00000465229 ANKIB1Q9P2G1 1089 aa20.79■□□□□ 0.92
EXOSC3-203ENST00000465229 NSFL1CQ9UNZ2 370 aaKnown RBP20.79■□□□□ 0.92
EXOSC3-203ENST00000465229 SPEF2Q9C093 1822 aa20.79■□□□□ 0.92
EXOSC3-203ENST00000465229 TIMM10P62072 90 aa20.78■□□□□ 0.92
EXOSC3-203ENST00000465229 TNNI3KQ59H18 835 aa20.78■□□□□ 0.92
EXOSC3-203ENST00000465229 C16orf71Q8IYS4 520 aaPredicted RBP20.78■□□□□ 0.92
EXOSC3-203ENST00000465229 TMX4Q9H1E5 349 aaPredicted RBP20.78■□□□□ 0.92
EXOSC3-203ENST00000465229 PODXL2Q9NZ53 605 aa20.78■□□□□ 0.92
EXOSC3-203ENST00000465229 ZBTB47Q9UFB7 747 aaPredicted RBP20.78■□□□□ 0.92
EXOSC3-203ENST00000465229 AKAP2Q9Y2D5 859 aa20.78■□□□□ 0.92
EXOSC3-203ENST00000465229 FPGT-TNNI3KV9GXZ4 949 aa20.78■□□□□ 0.92
EXOSC3-203ENST00000465229 XDHP47989 1333 aa20.78■□□□□ 0.92
EXOSC3-203ENST00000465229 FGFR2P21802 821 aa20.78■□□□□ 0.92
EXOSC3-203ENST00000465229 PUM3Q15397 648 aaKnown RBP20.78■□□□□ 0.92
EXOSC3-203ENST00000465229 ATP2B3Q16720 1220 aa20.77■□□□□ 0.92
EXOSC3-203ENST00000465229 CC2D2BQ6DHV5 1058 aa20.77■□□□□ 0.92
EXOSC3-203ENST00000465229 MPNDQ8N594 471 aa20.77■□□□□ 0.92
EXOSC3-203ENST00000465229 IPO9Q96P70 1041 aaKnown RBP20.77■□□□□ 0.92
EXOSC3-203ENST00000465229 BCS1LQ9Y276 419 aa20.77■□□□□ 0.92
EXOSC3-203ENST00000465229 A0A1B0GUL7 405 aa20.76■□□□□ 0.91
EXOSC3-203ENST00000465229 UBE4AQ14139 1066 aa20.76■□□□□ 0.91
EXOSC3-203ENST00000465229 AACSQ86V21 672 aa20.76■□□□□ 0.91
EXOSC3-203ENST00000465229 LPIN2Q92539 896 aa20.76■□□□□ 0.91
EXOSC3-203ENST00000465229 CCDC8Q9H0W5 538 aaPredicted RBP20.76■□□□□ 0.91
EXOSC3-203ENST00000465229 LEMD3Q9Y2U8 911 aa20.76■□□□□ 0.91
EXOSC3-203ENST00000465229 NEUROD6Q96NK8 337 aa20.75■□□□□ 0.91
EXOSC3-203ENST00000465229 POLLQ9UGP5 575 aa20.75■□□□□ 0.91
EXOSC3-203ENST00000465229 ZNF804BA4D1E1 1349 aa20.75■□□□□ 0.91
EXOSC3-203ENST00000465229 ATP2B4P23634 1241 aa20.75■□□□□ 0.91
EXOSC3-203ENST00000465229 DPP8Q6V1X1 898 aaPredicted RBP20.75■□□□□ 0.91
EXOSC3-203ENST00000465229 TBC1D16Q8TBP0 767 aa20.75■□□□□ 0.91
EXOSC3-203ENST00000465229 OTUD7AQ8TE49 926 aaPredicted RBP20.75■□□□□ 0.91
EXOSC3-203ENST00000465229 TLR7Q9NYK1 1049 aaKnown RBP20.75■□□□□ 0.91
EXOSC3-203ENST00000465229 GGA1Q9UJY5 639 aa20.75■□□□□ 0.91
EXOSC3-203ENST00000465229 BRCA1P38398 1863 aaKnown RBP20.74■□□□□ 0.91
EXOSC3-203ENST00000465229 KCNJ4P48050 445 aa20.74■□□□□ 0.91
EXOSC3-203ENST00000465229 CCDC93Q567U6 631 aa20.74■□□□□ 0.91
EXOSC3-203ENST00000465229 DBNLQ9UJU6 430 aaKnown RBP20.74■□□□□ 0.91
EXOSC3-203ENST00000465229 CACNA1SQ13698 1873 aa20.73■□□□□ 0.91
EXOSC3-203ENST00000465229 LRRC37AA6NMS7 1700 aa20.73■□□□□ 0.91
EXOSC3-203ENST00000465229 UTRNP46939 3433 aa20.73■□□□□ 0.91
EXOSC3-203ENST00000465229 ZNF609O15014 1411 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms