RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 TBC1D16Q8TBP0 767 aa15.46■□□□□ 0.07
XRN1-204ENST00000465074 SSH1Q8WYL5 1049 aa15.46■□□□□ 0.07
XRN1-204ENST00000465074 EYA3Q99504 573 aa15.46■□□□□ 0.07
XRN1-204ENST00000465074 GGA1Q9UJY5 639 aa15.46■□□□□ 0.07
XRN1-204ENST00000465074 DUOX1Q9NRD9 1551 aa15.45■□□□□ 0.06
XRN1-204ENST00000465074 CEP350Q5VT06 3117 aa15.45■□□□□ 0.06
XRN1-204ENST00000465074 FAM161AQ3B820 660 aa15.45■□□□□ 0.06
XRN1-204ENST00000465074 CIAPIN1Q6FI81 312 aa15.45■□□□□ 0.06
XRN1-204ENST00000465074 ZC3H12CQ9C0D7 883 aaKnown RBP15.45■□□□□ 0.06
XRN1-204ENST00000465074 SRCIN1Q9C0H9 1055 aa15.45■□□□□ 0.06
XRN1-204ENST00000465074 SMC4Q9NTJ3 1288 aa15.45■□□□□ 0.06
XRN1-204ENST00000465074 ITGA6P23229 1130 aa15.44■□□□□ 0.06
XRN1-204ENST00000465074 IGHMBP2P38935 993 aaKnown RBP15.44■□□□□ 0.06
XRN1-204ENST00000465074 EPS15P42566 896 aa15.44■□□□□ 0.06
XRN1-204ENST00000465074 CASP7P55210 303 aa15.44■□□□□ 0.06
XRN1-204ENST00000465074 HNRNPUQ00839 825 aaKnown RBP eCLIP15.44■□□□□ 0.06
XRN1-204ENST00000465074 TNIP1Q15025 636 aa15.44■□□□□ 0.06
XRN1-204ENST00000465074 GRM8O00222 908 aa15.43■□□□□ 0.06
XRN1-204ENST00000465074 ECE2O60344 883 aa15.43■□□□□ 0.06
XRN1-204ENST00000465074 GMPSP49915 693 aaPredicted RBP15.43■□□□□ 0.06
XRN1-204ENST00000465074 PNMA8AQ86V59 439 aaPredicted RBP15.43■□□□□ 0.06
XRN1-204ENST00000465074 LDHDQ86WU2 507 aa15.43■□□□□ 0.06
XRN1-204ENST00000465074 MPHOSPH8Q99549 860 aa15.43■□□□□ 0.06
XRN1-204ENST00000465074 XDHP47989 1333 aa15.43■□□□□ 0.06
XRN1-204ENST00000465074 ANKRD18BA2A2Z9 1011 aa15.42■□□□□ 0.06
XRN1-204ENST00000465074 WTIPA6NIX2 430 aaPredicted RBP15.42■□□□□ 0.06
XRN1-204ENST00000465074 YDJCA8MPS7 323 aa15.42■□□□□ 0.06
XRN1-204ENST00000465074 SCNN1DP51172 638 aa15.42■□□□□ 0.06
XRN1-204ENST00000465074 TAF7LQ5H9L4 462 aa15.42■□□□□ 0.06
XRN1-204ENST00000465074 LMBR1LQ6UX01 489 aa15.42■□□□□ 0.06
XRN1-204ENST00000465074 PLA2G12BQ9BX93 195 aa15.42■□□□□ 0.06
XRN1-204ENST00000465074 KCNQ5Q9NR82 932 aa15.42■□□□□ 0.06
XRN1-204ENST00000465074 BSDC1Q9NW68 430 aaPredicted RBP15.42■□□□□ 0.06
XRN1-204ENST00000465074 RNF216Q9NWF9 866 aaPredicted RBP15.42■□□□□ 0.06
XRN1-204ENST00000465074 MINPP1Q9UNW1 487 aa15.42■□□□□ 0.06
XRN1-204ENST00000465074 LTBP1Q14766 1721 aa15.41■□□□□ 0.06
XRN1-204ENST00000465074 ALDH1L1O75891 902 aa15.41■□□□□ 0.06
XRN1-204ENST00000465074 CSF1RP07333 972 aa15.41■□□□□ 0.06
XRN1-204ENST00000465074 FOXO4P98177 505 aa15.41■□□□□ 0.06
XRN1-204ENST00000465074 IFIT5Q13325 482 aaKnown RBP15.41■□□□□ 0.06
XRN1-204ENST00000465074 MAP1SQ66K74 1059 aaPredicted RBP15.41■□□□□ 0.06
XRN1-204ENST00000465074 TRMT2AQ8IZ69 625 aaKnown RBP15.41■□□□□ 0.06
XRN1-204ENST00000465074 PODXL2Q9NZ53 605 aa15.41■□□□□ 0.06
XRN1-204ENST00000465074 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
XRN1-204ENST00000465074 PTPRCP08575 1304 aa15.41■□□□□ 0.06
XRN1-204ENST00000465074 RTL9Q8NET4 1388 aa15.4■□□□□ 0.06
XRN1-204ENST00000465074 ATP2B4P23634 1241 aa15.4■□□□□ 0.06
XRN1-204ENST00000465074 KCNJ4P48050 445 aa15.4■□□□□ 0.06
XRN1-204ENST00000465074 ALDH1L2Q3SY69 923 aa15.4■□□□□ 0.06
XRN1-204ENST00000465074 EPHA10Q5JZY3 1008 aa15.4■□□□□ 0.06
XRN1-204ENST00000465074 CNKSR2Q8WXI2 1034 aa15.4■□□□□ 0.06
XRN1-204ENST00000465074 GPRC5DQ9NZD1 345 aa15.4■□□□□ 0.06
XRN1-204ENST00000465074 PSMD14O00487 310 aa15.39■□□□□ 0.05
XRN1-204ENST00000465074 PLIN1O60240 522 aa15.39■□□□□ 0.05
XRN1-204ENST00000465074 CCT4P50991 539 aaKnown RBP15.39■□□□□ 0.05
XRN1-204ENST00000465074 CCDC57Q2TAC2 916 aa15.39■□□□□ 0.05
XRN1-204ENST00000465074 HELBQ8NG08 1087 aaPredicted RBP15.39■□□□□ 0.05
XRN1-204ENST00000465074 FBXW7Q969H0 707 aa15.39■□□□□ 0.05
XRN1-204ENST00000465074 ZNF594Q96JF6 807 aaPredicted RBP15.39■□□□□ 0.05
XRN1-204ENST00000465074 CNOT7Q9UIV1 285 aaKnown RBP15.39■□□□□ 0.05
XRN1-204ENST00000465074 NOB1Q9ULX3 412 aaKnown RBP15.39■□□□□ 0.05
XRN1-204ENST00000465074 SHTN1A0MZ66 631 aa15.38■□□□□ 0.05
XRN1-204ENST00000465074 H7C1D1 291 aa15.38■□□□□ 0.05
XRN1-204ENST00000465074 NBPF7P0C2Y1 421 aaPredicted RBP15.38■□□□□ 0.05
XRN1-204ENST00000465074 RBM26Q5T8P6 1007 aaKnown RBP15.38■□□□□ 0.05
XRN1-204ENST00000465074 CNTROBQ8N137 903 aa15.38■□□□□ 0.05
XRN1-204ENST00000465074 SUCLG2Q96I99 432 aa15.38■□□□□ 0.05
XRN1-204ENST00000465074 ANKRD2Q9GZV1 360 aa15.38■□□□□ 0.05
XRN1-204ENST00000465074 ADARB2Q9NS39 739 aaKnown RBP15.38■□□□□ 0.05
XRN1-204ENST00000465074 TAF5LO75529 589 aa15.37■□□□□ 0.05
XRN1-204ENST00000465074 USP50Q70EL3 339 aaPredicted RBP15.37■□□□□ 0.05
XRN1-204ENST00000465074 MICALL2Q8IY33 904 aa15.37■□□□□ 0.05
XRN1-204ENST00000465074 CNNM1Q9NRU3 951 aa15.37■□□□□ 0.05
XRN1-204ENST00000465074 CHRNDQ07001 517 aa15.36■□□□□ 0.05
XRN1-204ENST00000465074 LDHAL6AQ6ZMR3 332 aa15.36■□□□□ 0.05
XRN1-204ENST00000465074 DNAJC5GQ8N7S2 189 aa15.36■□□□□ 0.05
XRN1-204ENST00000465074 ZNF804BA4D1E1 1349 aa15.36■□□□□ 0.05
XRN1-204ENST00000465074 SCN9AQ15858 1988 aa15.35■□□□□ 0.05
XRN1-204ENST00000465074 ITGBL1O95965 494 aaPredicted RBP15.35■□□□□ 0.05
XRN1-204ENST00000465074 CT47B1P0C2W7 299 aaPredicted RBP15.35■□□□□ 0.05
XRN1-204ENST00000465074 RARSP54136 660 aaKnown RBP15.35■□□□□ 0.05
XRN1-204ENST00000465074 TBC1D10BQ4KMP7 808 aaPredicted RBP15.35■□□□□ 0.05
XRN1-204ENST00000465074 SAMD7Q7Z3H4 446 aa15.35■□□□□ 0.05
XRN1-204ENST00000465074 BICC1Q9H694 974 aaKnown RBP15.35■□□□□ 0.05
XRN1-204ENST00000465074 LEMD3Q9Y2U8 911 aa15.35■□□□□ 0.05
XRN1-204ENST00000465074 ADAMTSL1Q8N6G6 1762 aa15.34■□□□□ 0.05
XRN1-204ENST00000465074 SNAP23O00161 211 aa15.34■□□□□ 0.05
XRN1-204ENST00000465074 FMR1Q06787 632 aaKnown RBP eCLIP15.34■□□□□ 0.05
XRN1-204ENST00000465074 TRPM4Q8TD43 1214 aa15.34■□□□□ 0.05
XRN1-204ENST00000465074 FRAT1Q92837 279 aaPredicted RBP15.34■□□□□ 0.05
XRN1-204ENST00000465074 KLRG1Q96E93 195 aa15.34■□□□□ 0.05
XRN1-204ENST00000465074 MKRN1Q9UHC7 482 aaKnown RBP15.34■□□□□ 0.05
XRN1-204ENST00000465074 TRAF5O00463 557 aa15.33■□□□□ 0.04
XRN1-204ENST00000465074 KLRK1P26718 216 aa15.33■□□□□ 0.04
XRN1-204ENST00000465074 TXNRD3Q86VQ6 643 aa15.33■□□□□ 0.04
XRN1-204ENST00000465074 KAZALD1Q96I82 304 aa15.33■□□□□ 0.04
XRN1-204ENST00000465074 API5Q9BZZ5 524 aaKnown RBP15.33■□□□□ 0.04
XRN1-204ENST00000465074 USP44Q9H0E7 712 aa15.33■□□□□ 0.04
XRN1-204ENST00000465074 MED23Q9ULK4 1368 aa15.33■□□□□ 0.04
XRN1-204ENST00000465074 USP17L3A6NCW0 530 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms