RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 BEGAINQ9BUH8 593 aa29.37■■■□□ 2.29
USP42-205ENST00000465073 SEC31BQ9NQW1 1179 aa29.37■■■□□ 2.29
USP42-205ENST00000465073 PDE8AO60658 829 aa29.36■■■□□ 2.29
USP42-205ENST00000465073 MAP2K2P36507 400 aa29.36■■■□□ 2.29
USP42-205ENST00000465073 DOK7Q18PE1 504 aa29.36■■■□□ 2.29
USP42-205ENST00000465073 ZC3H12CQ9C0D7 883 aaKnown RBP29.36■■■□□ 2.29
USP42-205ENST00000465073 COL4A1P02462 1669 aa29.36■■■□□ 2.29
USP42-205ENST00000465073 ANKIB1Q9P2G1 1089 aa29.35■■■□□ 2.29
USP42-205ENST00000465073 SAMD7Q7Z3H4 446 aa29.34■■■□□ 2.29
USP42-205ENST00000465073 TSPYL6Q8N831 410 aa29.34■■■□□ 2.29
USP42-205ENST00000465073 KCNQ5Q9NR82 932 aa29.34■■■□□ 2.29
USP42-205ENST00000465073 THSD7BQ9C0I4 1608 aa29.33■■■□□ 2.29
USP42-205ENST00000465073 ZNF408Q9H9D4 720 aa29.33■■■□□ 2.29
USP42-205ENST00000465073 GGA1Q9UJY5 639 aa29.33■■■□□ 2.29
USP42-205ENST00000465073 UFL1O94874 794 aa29.32■■■□□ 2.28
USP42-205ENST00000465073 USP48Q86UV5 1035 aa29.32■■■□□ 2.28
USP42-205ENST00000465073 JARID2Q92833 1246 aaPredicted RBP29.32■■■□□ 2.28
USP42-205ENST00000465073 MAP3K2Q9Y2U5 619 aa29.32■■■□□ 2.28
USP42-205ENST00000465073 RTL9Q8NET4 1388 aa29.32■■■□□ 2.28
USP42-205ENST00000465073 G3V3G9 751 aa29.31■■■□□ 2.28
USP42-205ENST00000465073 TBC1D10BQ4KMP7 808 aaPredicted RBP29.31■■■□□ 2.28
USP42-205ENST00000465073 DCAF8Q5TAQ9 597 aa29.31■■■□□ 2.28
USP42-205ENST00000465073 KSR2Q6VAB6 950 aa29.31■■■□□ 2.28
USP42-205ENST00000465073 AOC2O75106 756 aa29.3■■■□□ 2.28
USP42-205ENST00000465073 VIL1P09327 827 aaKnown RBP29.3■■■□□ 2.28
USP42-205ENST00000465073 CCDC27Q2M243 656 aa29.29■■■□□ 2.28
USP42-205ENST00000465073 ANKRD18AQ8IVF6 992 aa29.29■■■□□ 2.28
USP42-205ENST00000465073 STK31Q9BXU1 1019 aa29.29■■■□□ 2.28
USP42-205ENST00000465073 PI4KAP2A4QPH2 592 aa29.29■■■□□ 2.28
USP42-205ENST00000465073 KRT26Q7Z3Y9 468 aa29.29■■■□□ 2.28
USP42-205ENST00000465073 PI4KAP1Q8N8J0 262 aa29.29■■■□□ 2.28
USP42-205ENST00000465073 TSR2Q969E8 191 aaKnown RBP29.29■■■□□ 2.28
USP42-205ENST00000465073 CCDC85AQ96PX6 553 aaPredicted RBP29.29■■■□□ 2.28
USP42-205ENST00000465073 EGFRP00533 1210 aa29.28■■■□□ 2.28
USP42-205ENST00000465073 RBM26Q5T8P6 1007 aaKnown RBP29.28■■■□□ 2.28
USP42-205ENST00000465073 IGKV5-2P06315 115 aa29.27■■■□□ 2.28
USP42-205ENST00000465073 NEXNQ0ZGT2 675 aa29.27■■■□□ 2.28
USP42-205ENST00000465073 CCDC184Q52MB2 194 aa29.27■■■□□ 2.28
USP42-205ENST00000465073 DCPSQ96C86 337 aaKnown RBP29.27■■■□□ 2.28
USP42-205ENST00000465073 XDHP47989 1333 aa29.26■■■□□ 2.27
USP42-205ENST00000465073 CTSWP56202 376 aa29.26■■■□□ 2.27
USP42-205ENST00000465073 WWC1Q8IX03 1113 aa29.26■■■□□ 2.27
USP42-205ENST00000465073 CA12O43570 354 aa29.25■■■□□ 2.27
USP42-205ENST00000465073 CDC5LQ99459 802 aaKnown RBP29.25■■■□□ 2.27
USP42-205ENST00000465073 ATP2B4P23634 1241 aa29.24■■■□□ 2.27
USP42-205ENST00000465073 BRPF1P55201 1214 aaPredicted RBP29.24■■■□□ 2.27
USP42-205ENST00000465073 KIF4BQ2VIQ3 1234 aa29.24■■■□□ 2.27
USP42-205ENST00000465073 HUNKP57058 714 aa29.23■■■□□ 2.27
USP42-205ENST00000465073 TWISTNBQ3B726 338 aaPredicted RBP29.23■■■□□ 2.27
USP42-205ENST00000465073 TTLL11Q8NHH1 800 aa29.23■■■□□ 2.27
USP42-205ENST00000465073 DLK2Q6UY11 383 aa29.23■■■□□ 2.27
USP42-205ENST00000465073 AGBL3Q8NEM8 1001 aa29.23■■■□□ 2.27
USP42-205ENST00000465073 IL16Q14005 1332 aa29.22■■■□□ 2.27
USP42-205ENST00000465073 NOGQ13253 232 aa29.22■■■□□ 2.27
USP42-205ENST00000465073 NCBP3Q53F19 620 aaKnown RBP29.22■■■□□ 2.27
USP42-205ENST00000465073 RSBN1LQ6PCB5 846 aaPredicted RBP29.22■■■□□ 2.27
USP42-205ENST00000465073 C2orf69Q8N8R5 385 aa29.22■■■□□ 2.27
USP42-205ENST00000465073 ZNF609O15014 1411 aa29.21■■■□□ 2.27
USP42-205ENST00000465073 ZNF280AP59817 542 aaPredicted RBP29.21■■■□□ 2.27
USP42-205ENST00000465073 GBA2Q9HCG7 927 aaPredicted RBP29.21■■■□□ 2.27
USP42-205ENST00000465073 BSDC1Q9NW68 430 aaPredicted RBP29.21■■■□□ 2.27
USP42-205ENST00000465073 NEURL1BA8MQ27 555 aa29.2■■■□□ 2.26
USP42-205ENST00000465073 ADM5C9JUS6 153 aa29.2■■■□□ 2.26
USP42-205ENST00000465073 SLC4A2P04920 1241 aa29.2■■■□□ 2.26
USP42-205ENST00000465073 CWF19L2Q2TBE0 894 aaKnown RBP29.2■■■□□ 2.26
USP42-205ENST00000465073 PODNQ7Z5L7 613 aa29.2■■■□□ 2.26
USP42-205ENST00000465073 SULF1Q8IWU6 871 aa29.2■■■□□ 2.26
USP42-205ENST00000465073 ABHD8Q96I13 439 aa29.2■■■□□ 2.26
USP42-205ENST00000465073 SCN9AQ15858 1988 aa29.2■■■□□ 2.26
USP42-205ENST00000465073 GREM2Q9H772 168 aa29.19■■■□□ 2.26
USP42-205ENST00000465073 TSKSQ9UJT2 592 aa29.19■■■□□ 2.26
USP42-205ENST00000465073 H7C1W4 665 aa29.18■■■□□ 2.26
USP42-205ENST00000465073 G2E3Q7L622 706 aa29.18■■■□□ 2.26
USP42-205ENST00000465073 GGA3Q9NZ52 723 aa29.18■■■□□ 2.26
USP42-205ENST00000465073 GMLQ99445 158 aa29.17■■■□□ 2.26
USP42-205ENST00000465073 MINPP1Q9UNW1 487 aa29.17■■■□□ 2.26
USP42-205ENST00000465073 USP17L3A6NCW0 530 aa29.17■■■□□ 2.26
USP42-205ENST00000465073 USP17L4A6NCW7 530 aa29.17■■■□□ 2.26
USP42-205ENST00000465073 RGMBQ6NW40 437 aa29.17■■■□□ 2.26
USP42-205ENST00000465073 USP17L1Q7RTZ2 530 aa29.17■■■□□ 2.26
USP42-205ENST00000465073 UBE3BQ7Z3V4 1068 aa29.17■■■□□ 2.26
USP42-205ENST00000465073 USP17L8P0C7I0 530 aa29.16■■■□□ 2.26
USP42-205ENST00000465073 CCDC102AQ96A19 550 aa29.16■■■□□ 2.26
USP42-205ENST00000465073 SCARF1Q14162 830 aa29.15■■■□□ 2.26
USP42-205ENST00000465073 MED23Q9ULK4 1368 aa29.14■■■□□ 2.26
USP42-205ENST00000465073 POLR2AP24928 1970 aaKnown RBP29.14■■■□□ 2.26
USP42-205ENST00000465073 FLIIQ13045 1269 aa29.14■■■□□ 2.26
USP42-205ENST00000465073 ASTN2O75129 1339 aaPredicted RBP29.14■■■□□ 2.25
USP42-205ENST00000465073 WTIPA6NIX2 430 aaPredicted RBP29.13■■■□□ 2.25
USP42-205ENST00000465073 CCT4P50991 539 aaKnown RBP29.13■■■□□ 2.25
USP42-205ENST00000465073 GCKRQ14397 625 aa29.13■■■□□ 2.25
USP42-205ENST00000465073 ZIC5Q96T25 663 aa29.13■■■□□ 2.25
USP42-205ENST00000465073 PLA2G12BQ9BX93 195 aa29.13■■■□□ 2.25
USP42-205ENST00000465073 FAM155AB1AL88 458 aaPredicted RBP29.12■■■□□ 2.25
USP42-205ENST00000465073 IGHMBP2P38935 993 aaKnown RBP29.12■■■□□ 2.25
USP42-205ENST00000465073 ANGEL2Q5VTE6 544 aaKnown RBP29.12■■■□□ 2.25
USP42-205ENST00000465073 MRS2Q9HD23 443 aa29.12■■■□□ 2.25
USP42-205ENST00000465073 MYOZ2Q9NPC6 264 aa29.12■■■□□ 2.25
USP42-205ENST00000465073 ZNF157P51786 506 aaPredicted RBP29.11■■■□□ 2.25
USP42-205ENST00000465073 CDCA5Q96FF9 252 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms