RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CEP57L1Q8IYX8 460 aa8.55□□□□□ -1.04
USP48-206ENST00000464577 EAF2Q96CJ1 260 aaPredicted RBP8.55□□□□□ -1.04
USP48-206ENST00000464577 PA2G4Q9UQ80 394 aaKnown RBP8.55□□□□□ -1.04
USP48-206ENST00000464577 PSDA5PKW4 1024 aaPredicted RBP8.55□□□□□ -1.04
USP48-206ENST00000464577 H2AFXP16104 143 aaPredicted RBP8.55□□□□□ -1.04
USP48-206ENST00000464577 NLRP6P59044 892 aa8.55□□□□□ -1.04
USP48-206ENST00000464577 FAM160A1Q05DH4 1040 aa8.55□□□□□ -1.04
USP48-206ENST00000464577 ARID5BQ14865 1188 aa8.55□□□□□ -1.04
USP48-206ENST00000464577 NUTM2GQ5VZR2 741 aa8.55□□□□□ -1.04
USP48-206ENST00000464577 CCAR1Q8IX12 1150 aaKnown RBP8.55□□□□□ -1.04
USP48-206ENST00000464577 CCDC150Q8NCX0 1101 aa8.55□□□□□ -1.04
USP48-206ENST00000464577 AKT1S1Q96B36 256 aa8.55□□□□□ -1.04
USP48-206ENST00000464577 TCEANC2Q96MN5 208 aa8.55□□□□□ -1.04
USP48-206ENST00000464577 NEK1Q96PY6 1258 aa8.55□□□□□ -1.04
USP48-206ENST00000464577 NAT10Q9H0A0 1025 aaKnown RBP8.55□□□□□ -1.04
USP48-206ENST00000464577 MAP3K2Q9Y2U5 619 aa8.55□□□□□ -1.04
USP48-206ENST00000464577 TAF6LQ9Y6J9 622 aa8.55□□□□□ -1.04
USP48-206ENST00000464577 TSPOAP1O95153 1857 aa8.54□□□□□ -1.04
USP48-206ENST00000464577 PFKFB2O60825 505 aa8.54□□□□□ -1.04
USP48-206ENST00000464577 KINO60870 393 aaKnown RBP8.54□□□□□ -1.04
USP48-206ENST00000464577 STK3Q13188 491 aa8.54□□□□□ -1.04
USP48-206ENST00000464577 SNW1Q13573 536 aaKnown RBP8.54□□□□□ -1.04
USP48-206ENST00000464577 ELF2Q15723 593 aa8.54□□□□□ -1.04
USP48-206ENST00000464577 ZNF589Q86UQ0 364 aaPredicted RBP8.54□□□□□ -1.04
USP48-206ENST00000464577 ENGASEQ8NFI3 743 aa8.54□□□□□ -1.04
USP48-206ENST00000464577 LINS1Q8NG48 757 aa8.54□□□□□ -1.04
USP48-206ENST00000464577 ZNF396Q96N95 335 aaPredicted RBP8.54□□□□□ -1.04
USP48-206ENST00000464577 BPIFA3Q9BQP9 254 aa8.54□□□□□ -1.04
USP48-206ENST00000464577 HEG1Q9ULI3 1381 aa8.54□□□□□ -1.04
USP48-206ENST00000464577 RGPD8O14715 1765 aaPredicted RBP8.54□□□□□ -1.04
USP48-206ENST00000464577 LMTK3Q96Q04 1460 aa8.54□□□□□ -1.04
USP48-206ENST00000464577 GRM8O00222 908 aa8.53□□□□□ -1.04
USP48-206ENST00000464577 BMS1Q14692 1282 aaKnown RBP8.53□□□□□ -1.04
USP48-206ENST00000464577 SUCLG2Q96I99 432 aa8.53□□□□□ -1.04
USP48-206ENST00000464577 GOLPH3LQ9H4A5 285 aa8.53□□□□□ -1.04
USP48-206ENST00000464577 USP16Q9Y5T5 823 aa8.53□□□□□ -1.04
USP48-206ENST00000464577 HMGB1P09429 215 aaKnown RBP8.53□□□□□ -1.04
USP48-206ENST00000464577 MLECQ14165 292 aa8.53□□□□□ -1.04
USP48-206ENST00000464577 CCDC93Q567U6 631 aa8.53□□□□□ -1.04
USP48-206ENST00000464577 Q6ZUG5 572 aa8.53□□□□□ -1.04
USP48-206ENST00000464577 FILIP1Q7Z7B0 1213 aa8.53□□□□□ -1.04
USP48-206ENST00000464577 NSUN7Q8NE18 718 aaKnown RBP8.53□□□□□ -1.04
USP48-206ENST00000464577 KAZALD1Q96I82 304 aa8.53□□□□□ -1.04
USP48-206ENST00000464577 CCDC8Q9H0W5 538 aaPredicted RBP8.53□□□□□ -1.04
USP48-206ENST00000464577 BOLA2Q9H3K6 86 aa8.53□□□□□ -1.04
USP48-206ENST00000464577 ESF1Q9H501 851 aaKnown RBP8.53□□□□□ -1.04
USP48-206ENST00000464577 TLR7Q9NYK1 1049 aaKnown RBP8.53□□□□□ -1.04
USP48-206ENST00000464577 PHRF1Q9P1Y6 1649 aaKnown RBP8.53□□□□□ -1.04
USP48-206ENST00000464577 LTN1O94822 1766 aa8.53□□□□□ -1.04
USP48-206ENST00000464577 COL15A1P39059 1388 aa8.52□□□□□ -1.04
USP48-206ENST00000464577 NFAT5O94916 1531 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 A0A0U1RQG5 324 aaPredicted RBP8.52□□□□□ -1.05
USP48-206ENST00000464577 KCNQ3O43525 872 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 HSP90B1P14625 803 aaKnown RBP8.52□□□□□ -1.05
USP48-206ENST00000464577 ATP5JP18859 108 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 TEFQ10587 303 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 SCRN1Q12765 414 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 AKAP4Q5JQC9 854 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 NBPF11Q86T75 865 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 AOPEPQ8N6M6 819 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 CHMP4CQ96CF2 233 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 PPP1R13BQ96KQ4 1090 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 ZNF446Q9NWS9 450 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 CALCOCO1Q9P1Z2 691 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.52□□□□□ -1.05
USP48-206ENST00000464577 A0A1W2PQ27 194 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 A0A1W2PQ64 194 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 A0A1W2PQD8 194 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 BTBD11A6QL63 1104 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 CCP110O43303 1012 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 NRDCO43847 1150 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 ANXA1P04083 346 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 E4F1Q66K89 784 aaPredicted RBP8.52□□□□□ -1.05
USP48-206ENST00000464577 TICAM2Q86XR7 235 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 FSIP1Q8NA03 581 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 IP6K1Q92551 441 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 TIGD1Q96MW7 591 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 USP28Q96RU2 1077 aa8.52□□□□□ -1.05
USP48-206ENST00000464577 BICC1Q9H694 974 aaKnown RBP8.52□□□□□ -1.05
USP48-206ENST00000464577 TRMT1Q9NXH9 659 aaKnown RBP8.52□□□□□ -1.05
USP48-206ENST00000464577 SALL1Q9NSC2 1324 aa8.51□□□□□ -1.05
USP48-206ENST00000464577 ZNF609O15014 1411 aa8.51□□□□□ -1.05
USP48-206ENST00000464577 DDX58O95786 925 aaKnown RBP8.51□□□□□ -1.05
USP48-206ENST00000464577 LTKP29376 864 aa8.51□□□□□ -1.05
USP48-206ENST00000464577 CWF19L2Q2TBE0 894 aaKnown RBP8.51□□□□□ -1.05
USP48-206ENST00000464577 FMR1NBQ8N0W7 255 aaPredicted RBP8.51□□□□□ -1.05
USP48-206ENST00000464577 USHBP1Q8N6Y0 703 aa8.51□□□□□ -1.05
USP48-206ENST00000464577 MRPS27Q92552 414 aaKnown RBP8.51□□□□□ -1.05
USP48-206ENST00000464577 DDX11Q96FC9 970 aa8.51□□□□□ -1.05
USP48-206ENST00000464577 LTV1Q96GA3 475 aaPredicted RBP8.51□□□□□ -1.05
USP48-206ENST00000464577 AGXT2Q9BYV1 514 aa8.51□□□□□ -1.05
USP48-206ENST00000464577 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.51□□□□□ -1.05
USP48-206ENST00000464577 AMOTL2Q9Y2J4 779 aa8.51□□□□□ -1.05
USP48-206ENST00000464577 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.51□□□□□ -1.056e-10■□□□□ 10.7
USP48-206ENST00000464577 V9GYY5 206 aaPredicted RBP8.51□□□□□ -1.05
USP48-206ENST00000464577 ARHGAP23Q9P227 1491 aa8.51□□□□□ -1.05
USP48-206ENST00000464577 PHLPP2Q6ZVD8 1323 aa8.51□□□□□ -1.05
USP48-206ENST00000464577 SH3TC1Q8TE82 1336 aa8.51□□□□□ -1.05
USP48-206ENST00000464577 SIPA1L3O60292 1781 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms