RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 EIF6P56537 245 aaKnown RBP21.44■■□□□ 1.02
VPS52-215ENST00000464425 BICC1Q9H694 974 aaKnown RBP21.44■■□□□ 1.02
VPS52-215ENST00000464425 PODXL2Q9NZ53 605 aa21.44■■□□□ 1.02
VPS52-215ENST00000464425 GGA1Q9UJY5 639 aa21.44■■□□□ 1.02
VPS52-215ENST00000464425 TNNQ9UQP3 1299 aa21.44■■□□□ 1.02
VPS52-215ENST00000464425 TRIM27P14373 513 aa21.43■■□□□ 1.02
VPS52-215ENST00000464425 VEGFAP15692 232 aaPredicted RBP21.43■■□□□ 1.02
VPS52-215ENST00000464425 C1QTNF8P60827 252 aa21.43■■□□□ 1.02
VPS52-215ENST00000464425 CCDC57Q2TAC2 916 aa21.43■■□□□ 1.02
VPS52-215ENST00000464425 GJA3Q9Y6H8 435 aa21.43■■□□□ 1.02
VPS52-215ENST00000464425 POTECB2RU33 542 aa21.42■■□□□ 1.02
VPS52-215ENST00000464425 XDHP47989 1333 aa21.42■■□□□ 1.02
VPS52-215ENST00000464425 TAF7LQ5H9L4 462 aa21.42■■□□□ 1.02
VPS52-215ENST00000464425 ATF7IPQ6VMQ6 1270 aa21.42■■□□□ 1.02
VPS52-215ENST00000464425 C16orf71Q8IYS4 520 aaPredicted RBP21.42■■□□□ 1.02
VPS52-215ENST00000464425 CLUAP1Q96AJ1 413 aa21.42■■□□□ 1.02
VPS52-215ENST00000464425 ZNF594Q96JF6 807 aaPredicted RBP21.42■■□□□ 1.02
VPS52-215ENST00000464425 EYA3Q99504 573 aa21.42■■□□□ 1.02
VPS52-215ENST00000464425 DUOX1Q9NRD9 1551 aa21.42■■□□□ 1.02
VPS52-215ENST00000464425 ZNRF3Q9ULT6 936 aa21.42■■□□□ 1.02
VPS52-215ENST00000464425 WTIPA6NIX2 430 aaPredicted RBP21.41■■□□□ 1.02
VPS52-215ENST00000464425 DOK7Q18PE1 504 aa21.41■■□□□ 1.02
VPS52-215ENST00000464425 ATP2B4P23634 1241 aa21.4■■□□□ 1.02
VPS52-215ENST00000464425 ZKSCAN2Q63HK3 967 aa21.4■■□□□ 1.02
VPS52-215ENST00000464425 INTS3Q68E01 1043 aaKnown RBP21.4■■□□□ 1.02
VPS52-215ENST00000464425 GPC2Q8N158 579 aa21.4■■□□□ 1.02
VPS52-215ENST00000464425 ANKRD44Q8N8A2 993 aa21.4■■□□□ 1.02
VPS52-215ENST00000464425 ZC3H12CQ9C0D7 883 aaKnown RBP21.4■■□□□ 1.02
VPS52-215ENST00000464425 DBNDD1Q9H9R9 158 aa21.4■■□□□ 1.02
VPS52-215ENST00000464425 RCAN3Q9UKA8 241 aa21.4■■□□□ 1.02
VPS52-215ENST00000464425 TOMM70O94826 608 aa21.39■■□□□ 1.01
VPS52-215ENST00000464425 UBTFL1P0CB47 393 aaPredicted RBP21.39■■□□□ 1.01
VPS52-215ENST00000464425 CXCL9Q07325 125 aa21.39■■□□□ 1.01
VPS52-215ENST00000464425 SPEF2Q9C093 1822 aa21.39■■□□□ 1.01
VPS52-215ENST00000464425 YDJCA8MPS7 323 aa21.38■■□□□ 1.01
VPS52-215ENST00000464425 RAD17O75943 681 aa21.38■■□□□ 1.01
VPS52-215ENST00000464425 CHRNDQ07001 517 aa21.38■■□□□ 1.01
VPS52-215ENST00000464425 RABL6Q3YEC7 729 aaPredicted RBP21.38■■□□□ 1.01
VPS52-215ENST00000464425 L3MBTL3Q96JM7 780 aaPredicted RBP21.38■■□□□ 1.01
VPS52-215ENST00000464425 ANKRD2Q9GZV1 360 aa21.38■■□□□ 1.01
VPS52-215ENST00000464425 G3V3G9 751 aa21.37■■□□□ 1.01
VPS52-215ENST00000464425 DCAF8Q5TAQ9 597 aa21.37■■□□□ 1.01
VPS52-215ENST00000464425 LDHAL6AQ6ZMR3 332 aa21.37■■□□□ 1.01
VPS52-215ENST00000464425 HELBQ8NG08 1087 aaPredicted RBP21.37■■□□□ 1.01
VPS52-215ENST00000464425 MEIS3Q99687 375 aa21.37■■□□□ 1.01
VPS52-215ENST00000464425 CNNM1Q9NRU3 951 aa21.37■■□□□ 1.01
VPS52-215ENST00000464425 LTBP1Q14766 1721 aa21.37■■□□□ 1.01
VPS52-215ENST00000464425 WDR90Q96KV7 1748 aa21.36■■□□□ 1.01
VPS52-215ENST00000464425 ECE2O60344 883 aa21.36■■□□□ 1.01
VPS52-215ENST00000464425 TAF5LO75529 589 aa21.36■■□□□ 1.01
VPS52-215ENST00000464425 CIAPIN1Q6FI81 312 aa21.36■■□□□ 1.01
VPS52-215ENST00000464425 IQCA1LA6NCM1 817 aa21.35■■□□□ 1.01
VPS52-215ENST00000464425 TMEM57Q8N5G2 664 aa21.35■■□□□ 1.01
VPS52-215ENST00000464425 PUS3Q9BZE2 481 aaKnown RBP21.35■■□□□ 1.01
VPS52-215ENST00000464425 KCNQ5Q9NR82 932 aa21.35■■□□□ 1.01
VPS52-215ENST00000464425 HACL1Q9UJ83 578 aa21.35■■□□□ 1.01
VPS52-215ENST00000464425 LEMD3Q9Y2U8 911 aa21.35■■□□□ 1.01
VPS52-215ENST00000464425 LRRFIP2Q9Y608 721 aaKnown RBP21.35■■□□□ 1.01
VPS52-215ENST00000464425 PLIN1O60240 522 aa21.34■■□□□ 1.01
VPS52-215ENST00000464425 KCNJ4P48050 445 aa21.34■■□□□ 1.01
VPS52-215ENST00000464425 RBM46Q8TBY0 533 aaKnown RBP21.34■■□□□ 1.01
VPS52-215ENST00000464425 ZNF804BA4D1E1 1349 aa21.33■■□□□ 1.01
VPS52-215ENST00000464425 SNAP23O00161 211 aa21.33■■□□□ 1.01
VPS52-215ENST00000464425 TNIP1Q15025 636 aa21.33■■□□□ 1.01
VPS52-215ENST00000464425 FTSJ3Q8IY81 847 aaKnown RBP21.33■■□□□ 1.01
VPS52-215ENST00000464425 KLHDC4Q8TBB5 520 aa21.33■■□□□ 1.01
VPS52-215ENST00000464425 TAF1DQ9H5J8 278 aaPredicted RBP21.33■■□□□ 1.01
VPS52-215ENST00000464425 KLRK1P26718 216 aa21.32■■□□□ 1
VPS52-215ENST00000464425 LMOD1P29536 600 aaPredicted RBP21.32■■□□□ 1
VPS52-215ENST00000464425 EPHX2P34913 555 aa21.32■■□□□ 1
VPS52-215ENST00000464425 GMPSP49915 693 aaPredicted RBP21.32■■□□□ 1
VPS52-215ENST00000464425 SCNN1DP51172 638 aa21.32■■□□□ 1
VPS52-215ENST00000464425 TXNRD3Q86VQ6 643 aa21.32■■□□□ 1
VPS52-215ENST00000464425 DZIP1LQ8IYY4 767 aaKnown RBP21.32■■□□□ 1
VPS52-215ENST00000464425 HDAC5Q9UQL6 1122 aa21.32■■□□□ 1
VPS52-215ENST00000464425 PSMD14O00487 310 aa21.31■■□□□ 1
VPS52-215ENST00000464425 GNAI3P08754 354 aa21.31■■□□□ 1
VPS52-215ENST00000464425 POTEIP0CG38 1075 aa21.31■■□□□ 1
VPS52-215ENST00000464425 POTEJP0CG39 1038 aa21.31■■□□□ 1
VPS52-215ENST00000464425 RLBP1P12271 317 aa21.31■■□□□ 1
VPS52-215ENST00000464425 EPS15P42566 896 aa21.31■■□□□ 1
VPS52-215ENST00000464425 EAPPQ56P03 285 aaPredicted RBP21.31■■□□□ 1
VPS52-215ENST00000464425 LRRC24Q50LG9 513 aa21.3■■□□□ 1
VPS52-215ENST00000464425 ZBTB12Q9Y330 459 aaPredicted RBP21.3■■□□□ 1
VPS52-215ENST00000464425 RIPOR2Q9Y4F9 1068 aa21.3■■□□□ 1
VPS52-215ENST00000464425 MED23Q9ULK4 1368 aa21.3■■□□□ 1
VPS52-215ENST00000464425 RFX5P48382 616 aaPredicted RBP21.29■■□□□ 1
VPS52-215ENST00000464425 SMC1BQ8NDV3 1235 aa21.29■■□□□ 1
VPS52-215ENST00000464425 ITPRIPQ8IWB1 547 aa21.28■■□□□ 1
VPS52-215ENST00000464425 GPRC5DQ9NZD1 345 aa21.28■■□□□ 1
VPS52-215ENST00000464425 FSTL1Q12841 308 aa21.27■■□□□ 1
VPS52-215ENST00000464425 PODNQ7Z5L7 613 aa21.27■■□□□ 1
VPS52-215ENST00000464425 PANK1Q8TE04 598 aa21.27■■□□□ 1
VPS52-215ENST00000464425 COA1Q9GZY4 146 aa21.27■■□□□ 1
VPS52-215ENST00000464425 CLEC11AQ9Y240 323 aa21.27■■□□□ 1
VPS52-215ENST00000464425 SCN4AP35499 1836 aa21.27■□□□□ 0.99
VPS52-215ENST00000464425 MROH5Q6ZUA9 1318 aa21.27■□□□□ 0.99
VPS52-215ENST00000464425 SHTN1A0MZ66 631 aa21.26■□□□□ 0.99
VPS52-215ENST00000464425 GNAI2P04899 355 aa21.26■□□□□ 0.99
VPS52-215ENST00000464425 PTPN12Q05209 780 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms