RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 HSP90B1P14625 803 aaKnown RBP22.46■■□□□ 1.19
HMGN1-209ENST00000463631 MLLT1Q03111 559 aaPredicted RBP22.46■■□□□ 1.19
HMGN1-209ENST00000463631 MCOLN1Q9GZU1 580 aa22.46■■□□□ 1.19
HMGN1-209ENST00000463631 RGMBQ6NW40 437 aa22.45■■□□□ 1.18
HMGN1-209ENST00000463631 ZBTB38Q8NAP3 1195 aaPredicted RBP22.45■■□□□ 1.18
HMGN1-209ENST00000463631 ZIC5Q96T25 663 aa22.45■■□□□ 1.18
HMGN1-209ENST00000463631 GBA2Q9HCG7 927 aaPredicted RBP22.45■■□□□ 1.18
HMGN1-209ENST00000463631 MBIPQ9NS73 344 aa22.45■■□□□ 1.18
HMGN1-209ENST00000463631 FAM155AB1AL88 458 aaPredicted RBP22.44■■□□□ 1.18
HMGN1-209ENST00000463631 VIL1P09327 827 aaKnown RBP22.44■■□□□ 1.18
HMGN1-209ENST00000463631 ZNF853P0CG23 659 aa22.44■■□□□ 1.18
HMGN1-209ENST00000463631 RTL5Q5HYW3 569 aaPredicted RBP22.44■■□□□ 1.18
HMGN1-209ENST00000463631 DLK2Q6UY11 383 aa22.44■■□□□ 1.18
HMGN1-209ENST00000463631 DCPSQ96C86 337 aaKnown RBP22.44■■□□□ 1.18
HMGN1-209ENST00000463631 KCNQ5Q9NR82 932 aa22.44■■□□□ 1.18
HMGN1-209ENST00000463631 SAGE1Q9NXZ1 904 aa22.44■■□□□ 1.18
HMGN1-209ENST00000463631 ADAMTS8Q9UP79 889 aa22.44■■□□□ 1.18
HMGN1-209ENST00000463631 ADM5C9JUS6 153 aa22.43■■□□□ 1.18
HMGN1-209ENST00000463631 GOLGA2Q08379 1002 aa22.43■■□□□ 1.18
HMGN1-209ENST00000463631 DOK7Q18PE1 504 aa22.43■■□□□ 1.18
HMGN1-209ENST00000463631 KIF4BQ2VIQ3 1234 aa22.43■■□□□ 1.18
HMGN1-209ENST00000463631 C2orf69Q8N8R5 385 aa22.43■■□□□ 1.18
HMGN1-209ENST00000463631 SLC34A2O95436 690 aa22.42■■□□□ 1.18
HMGN1-209ENST00000463631 RIC3Q7Z5B4 369 aa22.42■■□□□ 1.18
HMGN1-209ENST00000463631 CCDC102AQ96A19 550 aa22.42■■□□□ 1.18
HMGN1-209ENST00000463631 ZC3H12CQ9C0D7 883 aaKnown RBP22.42■■□□□ 1.18
HMGN1-209ENST00000463631 UFL1O94874 794 aa22.41■■□□□ 1.18
HMGN1-209ENST00000463631 CCDC191Q8NCU4 936 aa22.41■■□□□ 1.18
HMGN1-209ENST00000463631 GGA3Q9NZ52 723 aa22.41■■□□□ 1.18
HMGN1-209ENST00000463631 ZNF280AP59817 542 aaPredicted RBP22.4■■□□□ 1.18
HMGN1-209ENST00000463631 CCDC152Q4G0S7 254 aa22.4■■□□□ 1.18
HMGN1-209ENST00000463631 SULF1Q8IWU6 871 aa22.4■■□□□ 1.18
HMGN1-209ENST00000463631 SEC31BQ9NQW1 1179 aa22.4■■□□□ 1.18
HMGN1-209ENST00000463631 IFT57Q9NWB7 429 aa22.4■■□□□ 1.18
HMGN1-209ENST00000463631 PDE4DIPQ5VU43 2346 aa22.4■■□□□ 1.18
HMGN1-209ENST00000463631 AKAP11Q9UKA4 1901 aa22.39■■□□□ 1.18
HMGN1-209ENST00000463631 PCCAP05165 728 aaPredicted RBP22.39■■□□□ 1.17
HMGN1-209ENST00000463631 DGKZQ13574 1117 aa22.39■■□□□ 1.17
HMGN1-209ENST00000463631 RBM26Q5T8P6 1007 aaKnown RBP22.39■■□□□ 1.17
HMGN1-209ENST00000463631 AGBL3Q8NEM8 1001 aa22.39■■□□□ 1.17
HMGN1-209ENST00000463631 ANKIB1Q9P2G1 1089 aa22.39■■□□□ 1.17
HMGN1-209ENST00000463631 GGA1Q9UJY5 639 aa22.39■■□□□ 1.17
HMGN1-209ENST00000463631 TNRC18O15417 2968 aaPredicted RBP22.38■■□□□ 1.17
HMGN1-209ENST00000463631 PAPPA2Q9BXP8 1791 aa22.38■■□□□ 1.17
HMGN1-209ENST00000463631 SLC10A3P09131 477 aa22.38■■□□□ 1.17
HMGN1-209ENST00000463631 DDX10Q13206 875 aaKnown RBP22.38■■□□□ 1.17
HMGN1-209ENST00000463631 PHAXQ9H814 394 aaKnown RBP22.38■■□□□ 1.17
HMGN1-209ENST00000463631 XDHP47989 1333 aa22.37■■□□□ 1.17
HMGN1-209ENST00000463631 PDE8AO60658 829 aa22.37■■□□□ 1.17
HMGN1-209ENST00000463631 ZNF157P51786 506 aaPredicted RBP22.37■■□□□ 1.17
HMGN1-209ENST00000463631 GNAI1P63096 354 aa22.37■■□□□ 1.17
HMGN1-209ENST00000463631 KIF23Q02241 960 aaPredicted RBP22.37■■□□□ 1.17
HMGN1-209ENST00000463631 CALD1Q05682 793 aaKnown RBP22.37■■□□□ 1.17
HMGN1-209ENST00000463631 RSBN1LQ6PCB5 846 aaPredicted RBP22.37■■□□□ 1.17
HMGN1-209ENST00000463631 MYD88Q99836 296 aa22.37■■□□□ 1.17
HMGN1-209ENST00000463631 MYH3P11055 1940 aa22.36■■□□□ 1.17
HMGN1-209ENST00000463631 CDCA5Q96FF9 252 aa22.36■■□□□ 1.17
HMGN1-209ENST00000463631 GMLQ99445 158 aa22.36■■□□□ 1.17
HMGN1-209ENST00000463631 CWC25Q9NXE8 425 aaPredicted RBP22.36■■□□□ 1.17
HMGN1-209ENST00000463631 ZNF646O15015 1829 aaPredicted RBP22.36■■□□□ 1.17
HMGN1-209ENST00000463631 ASTN2O75129 1339 aaPredicted RBP22.35■■□□□ 1.17
HMGN1-209ENST00000463631 PITPNM2Q9BZ72 1349 aa22.35■■□□□ 1.17
HMGN1-209ENST00000463631 FKBP1BP68106 108 aa22.35■■□□□ 1.17
HMGN1-209ENST00000463631 G3V3G9 751 aa22.34■■□□□ 1.17
HMGN1-209ENST00000463631 DCAF8Q5TAQ9 597 aa22.34■■□□□ 1.17
HMGN1-209ENST00000463631 METTL22Q9BUU2 404 aaPredicted RBP22.34■■□□□ 1.17
HMGN1-209ENST00000463631 CHMP4AQ9BY43 222 aa22.34■■□□□ 1.17
HMGN1-209ENST00000463631 RNF186Q9NXI6 227 aa22.34■■□□□ 1.17
HMGN1-209ENST00000463631 DDX58O95786 925 aaKnown RBP22.33■■□□□ 1.17
HMGN1-209ENST00000463631 SCARF1Q14162 830 aa22.33■■□□□ 1.17
HMGN1-209ENST00000463631 ANGEL2Q5VTE6 544 aaKnown RBP22.33■■□□□ 1.17
HMGN1-209ENST00000463631 PODNQ7Z5L7 613 aa22.33■■□□□ 1.17
HMGN1-209ENST00000463631 REM2Q8IYK8 340 aaPredicted RBP22.33■■□□□ 1.17
HMGN1-209ENST00000463631 USP17L8P0C7I0 530 aa22.32■■□□□ 1.16
HMGN1-209ENST00000463631 ANKRD18AQ8IVF6 992 aa22.32■■□□□ 1.16
HMGN1-209ENST00000463631 MYOZ2Q9NPC6 264 aa22.32■■□□□ 1.16
HMGN1-209ENST00000463631 MED23Q9ULK4 1368 aa22.32■■□□□ 1.16
HMGN1-209ENST00000463631 APAF1O14727 1248 aa22.31■■□□□ 1.16
HMGN1-209ENST00000463631 ATP2B4P23634 1241 aa22.31■■□□□ 1.16
HMGN1-209ENST00000463631 RASAL3Q86YV0 1011 aa22.31■■□□□ 1.16
HMGN1-209ENST00000463631 C8orf58Q8NAV2 365 aa22.31■■□□□ 1.16
HMGN1-209ENST00000463631 CSRNP1Q96S65 589 aa22.31■■□□□ 1.16
HMGN1-209ENST00000463631 PRKRIP1Q9H875 184 aaPredicted RBP22.31■■□□□ 1.16
HMGN1-209ENST00000463631 SPEF2Q9C093 1822 aa22.31■■□□□ 1.16
HMGN1-209ENST00000463631 USP17L3A6NCW0 530 aa22.3■■□□□ 1.16
HMGN1-209ENST00000463631 USP17L4A6NCW7 530 aa22.3■■□□□ 1.16
HMGN1-209ENST00000463631 ELL2O00472 640 aaPredicted RBP22.3■■□□□ 1.16
HMGN1-209ENST00000463631 TRPA1O75762 1119 aa22.3■■□□□ 1.16
HMGN1-209ENST00000463631 CTSWP56202 376 aa22.3■■□□□ 1.16
HMGN1-209ENST00000463631 CCDC30Q5VVM6 783 aa22.3■■□□□ 1.16
HMGN1-209ENST00000463631 USP17L1Q7RTZ2 530 aa22.3■■□□□ 1.16
HMGN1-209ENST00000463631 CDC5LQ99459 802 aaKnown RBP22.3■■□□□ 1.16
HMGN1-209ENST00000463631 CCDC85AQ96PX6 553 aaPredicted RBP22.29■■□□□ 1.16
HMGN1-209ENST00000463631 JARID2Q92833 1246 aaPredicted RBP22.28■■□□□ 1.16
HMGN1-209ENST00000463631 MAP3K2Q9Y2U5 619 aa22.28■■□□□ 1.16
HMGN1-209ENST00000463631 KSR2Q6VAB6 950 aa22.27■■□□□ 1.16
HMGN1-209ENST00000463631 TTLL11Q8NHH1 800 aa22.27■■□□□ 1.16
HMGN1-209ENST00000463631 BSDC1Q9NW68 430 aaPredicted RBP22.27■■□□□ 1.16
HMGN1-209ENST00000463631 IGKV5-2P06315 115 aa22.26■■□□□ 1.15
HMGN1-209ENST00000463631 MYO3BQ8WXR4 1341 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms