RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 PLAURQ03405 335 aa7.25□□□□□ -1.25
HERC4-208ENST00000463478 NSUN5Q96P11 429 aaKnown RBP7.25□□□□□ -1.25
HERC4-208ENST00000463478 IGFLR1Q9H665 355 aa7.25□□□□□ -1.25
HERC4-208ENST00000463478 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.25□□□□□ -1.25
HERC4-208ENST00000463478 MAP3K6O95382 1288 aa7.24□□□□□ -1.25
HERC4-208ENST00000463478 RECKO95980 971 aa7.24□□□□□ -1.25
HERC4-208ENST00000463478 EDN3P14138 238 aa7.24□□□□□ -1.25
HERC4-208ENST00000463478 VAMP1P23763 118 aa7.24□□□□□ -1.25
HERC4-208ENST00000463478 ITGAEP38570 1179 aa7.24□□□□□ -1.25
HERC4-208ENST00000463478 MRPL58Q14197 206 aaKnown RBP7.24□□□□□ -1.25
HERC4-208ENST00000463478 SYT9Q86SS6 491 aa7.24□□□□□ -1.25
HERC4-208ENST00000463478 NCAPG2Q86XI2 1143 aa7.24□□□□□ -1.25
HERC4-208ENST00000463478 FRMD6Q96NE9 622 aa7.24□□□□□ -1.25
HERC4-208ENST00000463478 UBE2OQ9C0C9 1292 aaKnown RBP7.24□□□□□ -1.25
HERC4-208ENST00000463478 LATS2Q9NRM7 1088 aa7.24□□□□□ -1.25
HERC4-208ENST00000463478 C2CD2LO14523 706 aa7.23□□□□□ -1.25
HERC4-208ENST00000463478 SOX18P35713 384 aa7.23□□□□□ -1.25
HERC4-208ENST00000463478 PCBP4P57723 403 aaKnown RBP7.23□□□□□ -1.25
HERC4-208ENST00000463478 MLLT1Q03111 559 aaPredicted RBP7.23□□□□□ -1.25
HERC4-208ENST00000463478 HYAL2Q12891 473 aa7.23□□□□□ -1.25
HERC4-208ENST00000463478 GAS6Q14393 721 aa7.23□□□□□ -1.25
HERC4-208ENST00000463478 COL13A1Q5TAT6 717 aaPredicted RBP7.23□□□□□ -1.25
HERC4-208ENST00000463478 ZNF468Q5VIY5 522 aaPredicted RBP7.23□□□□□ -1.25
HERC4-208ENST00000463478 GPR161Q8N6U8 529 aaKnown RBP7.23□□□□□ -1.25
HERC4-208ENST00000463478 SALL4Q9UJQ4 1053 aa7.23□□□□□ -1.25
HERC4-208ENST00000463478 EIF4BP23588 611 aaKnown RBP7.22□□□□□ -1.25
HERC4-208ENST00000463478 NRLP54845 237 aa7.22□□□□□ -1.25
HERC4-208ENST00000463478 BACH2Q9BYV9 841 aa7.22□□□□□ -1.25
HERC4-208ENST00000463478 AK5Q9Y6K8 562 aa7.22□□□□□ -1.25
HERC4-208ENST00000463478 KIF4AO95239 1232 aa7.21□□□□□ -1.26
HERC4-208ENST00000463478 ACPPP15309 386 aa7.21□□□□□ -1.26
HERC4-208ENST00000463478 LORP23490 312 aaPredicted RBP7.21□□□□□ -1.26
HERC4-208ENST00000463478 GPLD1P80108 840 aa7.21□□□□□ -1.26
HERC4-208ENST00000463478 NXPE4Q6UWF7 544 aa7.21□□□□□ -1.26
HERC4-208ENST00000463478 HFE2Q6ZVN8 426 aa7.21□□□□□ -1.26
HERC4-208ENST00000463478 SPACA7Q96KW9 195 aa7.21□□□□□ -1.26
HERC4-208ENST00000463478 BCO2Q9BYV7 579 aa7.21□□□□□ -1.26
HERC4-208ENST00000463478 OSBPL7Q9BZF2 842 aa7.21□□□□□ -1.26
HERC4-208ENST00000463478 EHD4Q9H223 541 aa7.21□□□□□ -1.26
HERC4-208ENST00000463478 SUV39H2Q9H5I1 410 aa7.21□□□□□ -1.26
HERC4-208ENST00000463478 C12orf49Q9H741 205 aa7.21□□□□□ -1.26
HERC4-208ENST00000463478 MBIPQ9NS73 344 aa7.21□□□□□ -1.26
HERC4-208ENST00000463478 DNAJB12Q9NXW2 375 aaKnown RBP7.21□□□□□ -1.26
HERC4-208ENST00000463478 NSFL1CQ9UNZ2 370 aaKnown RBP7.21□□□□□ -1.26
HERC4-208ENST00000463478 A0A1W2PP55 124 aa7.2□□□□□ -1.26
HERC4-208ENST00000463478 ZBTB42B2RXF5 422 aa7.2□□□□□ -1.26
HERC4-208ENST00000463478 J3QW42 95 aa7.2□□□□□ -1.26
HERC4-208ENST00000463478 SIN3BO75182 1162 aa7.2□□□□□ -1.26
HERC4-208ENST00000463478 HOXD8P13378 290 aaPredicted RBP7.2□□□□□ -1.26
HERC4-208ENST00000463478 GRM2Q14416 872 aa7.2□□□□□ -1.26
HERC4-208ENST00000463478 PEAR1Q5VY43 1037 aaPredicted RBP7.2□□□□□ -1.26
HERC4-208ENST00000463478 TMEM87AQ8NBN3 555 aa7.2□□□□□ -1.26
HERC4-208ENST00000463478 TRPM4Q8TD43 1214 aa7.2□□□□□ -1.26
HERC4-208ENST00000463478 COL25A1Q9BXS0 654 aaPredicted RBP7.2□□□□□ -1.26
HERC4-208ENST00000463478 LOC102724428A0A0B4J2F2 783 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 GIPC1O14908 333 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 TRPA1O75762 1119 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 GHRHP01286 108 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 TCF3P15923 654 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 EIF2AK2P19525 551 aaKnown RBP7.19□□□□□ -1.26
HERC4-208ENST00000463478 ADH6P28332 368 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 MAP2K3P46734 347 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 SIK1P57059 783 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 KIAA0319Q5VV43 1072 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 ZSCAN1Q8NBB4 408 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 CRELD1Q96HD1 420 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 OSMRQ99650 979 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 ZKSCAN3Q9BRR0 538 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 LIN7BQ9HAP6 207 aa7.19□□□□□ -1.26
HERC4-208ENST00000463478 AVENQ9NQS1 362 aaPredicted RBP7.19□□□□□ -1.26
HERC4-208ENST00000463478 NEURL1BA8MQ27 555 aa7.18□□□□□ -1.26
HERC4-208ENST00000463478 USP17L7P0C7H9 530 aa7.18□□□□□ -1.26
HERC4-208ENST00000463478 ARAFP10398 606 aa7.18□□□□□ -1.26
HERC4-208ENST00000463478 PCSK7Q16549 785 aa7.18□□□□□ -1.26
HERC4-208ENST00000463478 RNFT1Q5M7Z0 435 aa7.18□□□□□ -1.26
HERC4-208ENST00000463478 CEP120Q8N960 986 aa7.18□□□□□ -1.26
HERC4-208ENST00000463478 CNTNAP3BQ96NU0 1288 aa7.18□□□□□ -1.26
HERC4-208ENST00000463478 CNTNAP3Q9BZ76 1288 aa7.18□□□□□ -1.26
HERC4-208ENST00000463478 SRCIN1Q9C0H9 1055 aa7.18□□□□□ -1.26
HERC4-208ENST00000463478 RBSNQ9H1K0 784 aa7.18□□□□□ -1.26
HERC4-208ENST00000463478 FAM8A1Q9UBU6 413 aa7.18□□□□□ -1.26
HERC4-208ENST00000463478 TRAK1Q9UPV9 953 aa7.18□□□□□ -1.26
HERC4-208ENST00000463478 IGF1RP08069 1367 aa7.18□□□□□ -1.26
HERC4-208ENST00000463478 CTSHP09668 335 aa7.17□□□□□ -1.26
HERC4-208ENST00000463478 CPB1P15086 417 aa7.17□□□□□ -1.26
HERC4-208ENST00000463478 ATP11AP98196 1134 aa7.17□□□□□ -1.26
HERC4-208ENST00000463478 FAM35AQ86V20 835 aa7.17□□□□□ -1.26
HERC4-208ENST00000463478 TNFRSF25Q93038 417 aa7.17□□□□□ -1.26
HERC4-208ENST00000463478 IGSF5Q9NSI5 407 aa7.17□□□□□ -1.26
HERC4-208ENST00000463478 PPP4R2Q9NY27 417 aa7.17□□□□□ -1.26
HERC4-208ENST00000463478 KLF15Q9UIH9 416 aa7.17□□□□□ -1.26
HERC4-208ENST00000463478 GGA1Q9UJY5 639 aa7.17□□□□□ -1.26
HERC4-208ENST00000463478 SLC6A14Q9UN76 642 aa7.17□□□□□ -1.26
HERC4-208ENST00000463478 SCAMP3O14828 347 aaKnown RBP7.16□□□□□ -1.26
HERC4-208ENST00000463478 ADH7P40394 386 aa7.16□□□□□ -1.26
HERC4-208ENST00000463478 FCGRTP55899 365 aa7.16□□□□□ -1.26
HERC4-208ENST00000463478 SUZ12Q15022 739 aaKnown RBP7.16□□□□□ -1.26
HERC4-208ENST00000463478 FCHSD1Q86WN1 690 aa7.16□□□□□ -1.26
HERC4-208ENST00000463478 GLIS3Q8NEA6 775 aa7.16□□□□□ -1.26
HERC4-208ENST00000463478 HHIPQ96QV1 700 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms