RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 TSKSQ9UJT2 592 aa25.6■■□□□ 1.69
VARS-221ENST00000463184 ZNF316A6NFI3 1004 aaPredicted RBP25.59■■□□□ 1.69
VARS-221ENST00000463184 TBC1D10BQ4KMP7 808 aaPredicted RBP25.59■■□□□ 1.69
VARS-221ENST00000463184 KRT26Q7Z3Y9 468 aa25.59■■□□□ 1.69
VARS-221ENST00000463184 CCDC191Q8NCU4 936 aa25.59■■□□□ 1.69
VARS-221ENST00000463184 KCNQ5Q9NR82 932 aa25.59■■□□□ 1.69
VARS-221ENST00000463184 RTL9Q8NET4 1388 aa25.58■■□□□ 1.69
VARS-221ENST00000463184 APAF1O14727 1248 aa25.58■■□□□ 1.69
VARS-221ENST00000463184 HUNKP57058 714 aa25.58■■□□□ 1.69
VARS-221ENST00000463184 NOGQ13253 232 aa25.58■■□□□ 1.69
VARS-221ENST00000463184 DCPSQ96C86 337 aaKnown RBP25.58■■□□□ 1.69
VARS-221ENST00000463184 MYD88Q99836 296 aa25.58■■□□□ 1.69
VARS-221ENST00000463184 CHMP4AQ9BY43 222 aa25.58■■□□□ 1.69
VARS-221ENST00000463184 PRKRIP1Q9H875 184 aaPredicted RBP25.58■■□□□ 1.69
VARS-221ENST00000463184 SEC31BQ9NQW1 1179 aa25.58■■□□□ 1.69
VARS-221ENST00000463184 ELL2O00472 640 aaPredicted RBP25.57■■□□□ 1.68
VARS-221ENST00000463184 PCCAP05165 728 aaPredicted RBP25.57■■□□□ 1.68
VARS-221ENST00000463184 VIL1P09327 827 aaKnown RBP25.57■■□□□ 1.68
VARS-221ENST00000463184 CCDC152Q4G0S7 254 aa25.57■■□□□ 1.68
VARS-221ENST00000463184 ANKIB1Q9P2G1 1089 aa25.57■■□□□ 1.68
VARS-221ENST00000463184 COL4A1P02462 1669 aa25.57■■□□□ 1.68
VARS-221ENST00000463184 EGFRP00533 1210 aa25.56■■□□□ 1.68
VARS-221ENST00000463184 RBM26Q5T8P6 1007 aaKnown RBP25.56■■□□□ 1.68
VARS-221ENST00000463184 GGA1Q9UJY5 639 aa25.56■■□□□ 1.68
VARS-221ENST00000463184 G3V3G9 751 aa25.55■■□□□ 1.68
VARS-221ENST00000463184 PDE8AO60658 829 aa25.55■■□□□ 1.68
VARS-221ENST00000463184 UFL1O94874 794 aa25.55■■□□□ 1.68
VARS-221ENST00000463184 DCAF8Q5TAQ9 597 aa25.55■■□□□ 1.68
VARS-221ENST00000463184 DLK2Q6UY11 383 aa25.55■■□□□ 1.68
VARS-221ENST00000463184 C2orf69Q8N8R5 385 aa25.55■■□□□ 1.68
VARS-221ENST00000463184 CWC25Q9NXE8 425 aaPredicted RBP25.55■■□□□ 1.68
VARS-221ENST00000463184 DDX58O95786 925 aaKnown RBP25.54■■□□□ 1.68
VARS-221ENST00000463184 KIF4BQ2VIQ3 1234 aa25.54■■□□□ 1.68
VARS-221ENST00000463184 METTL22Q9BUU2 404 aaPredicted RBP25.54■■□□□ 1.68
VARS-221ENST00000463184 GBA2Q9HCG7 927 aaPredicted RBP25.54■■□□□ 1.68
VARS-221ENST00000463184 CCDC30Q5VVM6 783 aa25.53■■□□□ 1.68
VARS-221ENST00000463184 RGMBQ6NW40 437 aa25.53■■□□□ 1.68
VARS-221ENST00000463184 C8orf58Q8NAV2 365 aa25.53■■□□□ 1.68
VARS-221ENST00000463184 CCDC85CA6NKD9 419 aa25.52■■□□□ 1.68
VARS-221ENST00000463184 POLR2AP24928 1970 aaKnown RBP25.51■■□□□ 1.67
VARS-221ENST00000463184 ADM5C9JUS6 153 aa25.51■■□□□ 1.67
VARS-221ENST00000463184 AGBL3Q8NEM8 1001 aa25.51■■□□□ 1.67
VARS-221ENST00000463184 CCDC102AQ96A19 550 aa25.51■■□□□ 1.67
VARS-221ENST00000463184 ZIC5Q96T25 663 aa25.51■■□□□ 1.67
VARS-221ENST00000463184 ANKRD18AQ8IVF6 992 aa25.5■■□□□ 1.67
VARS-221ENST00000463184 SULF1Q8IWU6 871 aa25.5■■□□□ 1.67
VARS-221ENST00000463184 XDHP47989 1333 aa25.49■■□□□ 1.67
VARS-221ENST00000463184 FAM155AB1AL88 458 aaPredicted RBP25.49■■□□□ 1.67
VARS-221ENST00000463184 RSBN1LQ6PCB5 846 aaPredicted RBP25.49■■□□□ 1.67
VARS-221ENST00000463184 JARID2Q92833 1246 aaPredicted RBP25.49■■□□□ 1.67
VARS-221ENST00000463184 CCDC85AQ96PX6 553 aaPredicted RBP25.49■■□□□ 1.67
VARS-221ENST00000463184 SCN9AQ15858 1988 aa25.49■■□□□ 1.67
VARS-221ENST00000463184 ZNF609O15014 1411 aa25.48■■□□□ 1.67
VARS-221ENST00000463184 ATP2B4P23634 1241 aa25.48■■□□□ 1.67
VARS-221ENST00000463184 ZNF280AP59817 542 aaPredicted RBP25.48■■□□□ 1.67
VARS-221ENST00000463184 MCOLN1Q9GZU1 580 aa25.48■■□□□ 1.67
VARS-221ENST00000463184 GGA3Q9NZ52 723 aa25.48■■□□□ 1.67
VARS-221ENST00000463184 MAP3K2Q9Y2U5 619 aa25.48■■□□□ 1.67
VARS-221ENST00000463184 RGS19P49795 217 aa25.47■■□□□ 1.67
VARS-221ENST00000463184 ZNF157P51786 506 aaPredicted RBP25.47■■□□□ 1.67
VARS-221ENST00000463184 FAM161AQ3B820 660 aa25.47■■□□□ 1.67
VARS-221ENST00000463184 CDC5LQ99459 802 aaKnown RBP25.47■■□□□ 1.67
VARS-221ENST00000463184 CASP8AP2Q9UKL3 1982 aa25.46■■□□□ 1.67
VARS-221ENST00000463184 KSR2Q6VAB6 950 aa25.46■■□□□ 1.67
VARS-221ENST00000463184 PODNQ7Z5L7 613 aa25.46■■□□□ 1.67
VARS-221ENST00000463184 SCARF1Q14162 830 aa25.45■■□□□ 1.66
VARS-221ENST00000463184 TSPYL6Q8N831 410 aa25.45■■□□□ 1.66
VARS-221ENST00000463184 SAGE1Q9NXZ1 904 aa25.45■■□□□ 1.66
VARS-221ENST00000463184 CTSWP56202 376 aa25.44■■□□□ 1.66
VARS-221ENST00000463184 KIF23Q02241 960 aaPredicted RBP25.44■■□□□ 1.66
VARS-221ENST00000463184 GMLQ99445 158 aa25.44■■□□□ 1.66
VARS-221ENST00000463184 ASTN2O75129 1339 aaPredicted RBP25.43■■□□□ 1.66
VARS-221ENST00000463184 PI4KAP2A4QPH2 592 aa25.43■■□□□ 1.66
VARS-221ENST00000463184 USP17L3A6NCW0 530 aa25.43■■□□□ 1.66
VARS-221ENST00000463184 USP17L4A6NCW7 530 aa25.43■■□□□ 1.66
VARS-221ENST00000463184 IGKV5-2P06315 115 aa25.43■■□□□ 1.66
VARS-221ENST00000463184 USP17L8P0C7I0 530 aa25.43■■□□□ 1.66
VARS-221ENST00000463184 MLLT1Q03111 559 aaPredicted RBP25.43■■□□□ 1.66
VARS-221ENST00000463184 NEXNQ0ZGT2 675 aa25.43■■□□□ 1.66
VARS-221ENST00000463184 DGKZQ13574 1117 aa25.43■■□□□ 1.66
VARS-221ENST00000463184 ANGEL2Q5VTE6 544 aaKnown RBP25.43■■□□□ 1.66
VARS-221ENST00000463184 USP17L1Q7RTZ2 530 aa25.43■■□□□ 1.66
VARS-221ENST00000463184 PI4KAP1Q8N8J0 262 aa25.43■■□□□ 1.66
VARS-221ENST00000463184 TTLL11Q8NHH1 800 aa25.43■■□□□ 1.66
VARS-221ENST00000463184 CDCA5Q96FF9 252 aa25.43■■□□□ 1.66
VARS-221ENST00000463184 BSDC1Q9NW68 430 aaPredicted RBP25.43■■□□□ 1.66
VARS-221ENST00000463184 STK31Q9BXU1 1019 aa25.42■■□□□ 1.66
VARS-221ENST00000463184 MYOZ2Q9NPC6 264 aa25.42■■□□□ 1.66
VARS-221ENST00000463184 SLC10A3P09131 477 aa25.41■■□□□ 1.66
VARS-221ENST00000463184 MINPP1Q9UNW1 487 aa25.41■■□□□ 1.66
VARS-221ENST00000463184 PITPNM2Q9BZ72 1349 aa25.4■■□□□ 1.66
VARS-221ENST00000463184 FKBP1BP68106 108 aa25.4■■□□□ 1.66
VARS-221ENST00000463184 REM2Q8IYK8 340 aaPredicted RBP25.4■■□□□ 1.66
VARS-221ENST00000463184 GREM2Q9H772 168 aa25.39■■□□□ 1.66
VARS-221ENST00000463184 RNF186Q9NXI6 227 aa25.39■■□□□ 1.66
VARS-221ENST00000463184 MED23Q9ULK4 1368 aa25.39■■□□□ 1.65
VARS-221ENST00000463184 PSME4Q14997 1843 aa25.39■■□□□ 1.65
VARS-221ENST00000463184 TSR2Q969E8 191 aaKnown RBP25.38■■□□□ 1.65
VARS-221ENST00000463184 CSRNP1Q96S65 589 aa25.38■■□□□ 1.65
VARS-221ENST00000463184 NEURL1BA8MQ27 555 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms