RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 SCNN1DP51172 638 aa22.8■■□□□ 1.24
LINC00960-201ENST00000463183 LDHDQ86WU2 507 aa22.8■■□□□ 1.24
LINC00960-201ENST00000463183 SRCIN1Q9C0H9 1055 aa22.8■■□□□ 1.24
LINC00960-201ENST00000463183 C9orf78Q9NZ63 289 aaPredicted RBP22.8■■□□□ 1.24
LINC00960-201ENST00000463183 MYH3P11055 1940 aa22.79■■□□□ 1.24
LINC00960-201ENST00000463183 YDJCA8MPS7 323 aa22.79■■□□□ 1.24
LINC00960-201ENST00000463183 IGHMBP2P38935 993 aaKnown RBP22.79■■□□□ 1.24
LINC00960-201ENST00000463183 GMPSP49915 693 aaPredicted RBP22.79■■□□□ 1.24
LINC00960-201ENST00000463183 ZC3H12CQ9C0D7 883 aaKnown RBP22.79■■□□□ 1.24
LINC00960-201ENST00000463183 SMC4Q9NTJ3 1288 aa22.79■■□□□ 1.24
LINC00960-201ENST00000463183 GRM8O00222 908 aa22.78■■□□□ 1.24
LINC00960-201ENST00000463183 PNMA8AQ86V59 439 aaPredicted RBP22.78■■□□□ 1.24
LINC00960-201ENST00000463183 PLA2G12BQ9BX93 195 aa22.78■■□□□ 1.24
LINC00960-201ENST00000463183 SPEF2Q9C093 1822 aa22.77■■□□□ 1.24
LINC00960-201ENST00000463183 XDHP47989 1333 aa22.77■■□□□ 1.24
LINC00960-201ENST00000463183 ECE2O60344 883 aa22.77■■□□□ 1.24
LINC00960-201ENST00000463183 TNIP1Q15025 636 aa22.77■■□□□ 1.24
LINC00960-201ENST00000463183 PODXL2Q9NZ53 605 aa22.77■■□□□ 1.24
LINC00960-201ENST00000463183 MAP1SQ66K74 1059 aaPredicted RBP22.76■■□□□ 1.23
LINC00960-201ENST00000463183 MPHOSPH8Q99549 860 aa22.76■■□□□ 1.23
LINC00960-201ENST00000463183 BSDC1Q9NW68 430 aaPredicted RBP22.76■■□□□ 1.23
LINC00960-201ENST00000463183 RTL9Q8NET4 1388 aa22.75■■□□□ 1.23
LINC00960-201ENST00000463183 LTBP1Q14766 1721 aa22.75■■□□□ 1.23
LINC00960-201ENST00000463183 ALDH1L1O75891 902 aa22.75■■□□□ 1.23
LINC00960-201ENST00000463183 KCNQ5Q9NR82 932 aa22.75■■□□□ 1.23
LINC00960-201ENST00000463183 MINPP1Q9UNW1 487 aa22.75■■□□□ 1.23
LINC00960-201ENST00000463183 ZBTB12Q9Y330 459 aaPredicted RBP22.75■■□□□ 1.23
LINC00960-201ENST00000463183 ANKRD18BA2A2Z9 1011 aa22.74■■□□□ 1.23
LINC00960-201ENST00000463183 WTIPA6NIX2 430 aaPredicted RBP22.74■■□□□ 1.23
LINC00960-201ENST00000463183 PSMD14O00487 310 aa22.74■■□□□ 1.23
LINC00960-201ENST00000463183 CSF1RP07333 972 aa22.74■■□□□ 1.23
LINC00960-201ENST00000463183 ATP2B4P23634 1241 aa22.74■■□□□ 1.23
LINC00960-201ENST00000463183 HNRNPUQ00839 825 aaKnown RBP eCLIP22.74■■□□□ 1.23
LINC00960-201ENST00000463183 EPHA10Q5JZY3 1008 aa22.74■■□□□ 1.23
LINC00960-201ENST00000463183 LMBR1LQ6UX01 489 aa22.74■■□□□ 1.23
LINC00960-201ENST00000463183 TRMT2AQ8IZ69 625 aaKnown RBP22.74■■□□□ 1.23
LINC00960-201ENST00000463183 GPRC5DQ9NZD1 345 aa22.74■■□□□ 1.23
LINC00960-201ENST00000463183 PTPRCP08575 1304 aa22.73■■□□□ 1.23
LINC00960-201ENST00000463183 FOXO4P98177 505 aa22.73■■□□□ 1.23
LINC00960-201ENST00000463183 SHTN1A0MZ66 631 aa22.72■■□□□ 1.23
LINC00960-201ENST00000463183 IFIT5Q13325 482 aaKnown RBP22.72■■□□□ 1.23
LINC00960-201ENST00000463183 ALDH1L2Q3SY69 923 aa22.72■■□□□ 1.23
LINC00960-201ENST00000463183 TAF7LQ5H9L4 462 aa22.72■■□□□ 1.23
LINC00960-201ENST00000463183 CCT4P50991 539 aaKnown RBP22.71■■□□□ 1.23
LINC00960-201ENST00000463183 CNTROBQ8N137 903 aa22.71■■□□□ 1.23
LINC00960-201ENST00000463183 SUCLG2Q96I99 432 aa22.71■■□□□ 1.23
LINC00960-201ENST00000463183 ADARB2Q9NS39 739 aaKnown RBP22.71■■□□□ 1.23
LINC00960-201ENST00000463183 NBPF7P0C2Y1 421 aaPredicted RBP22.7■■□□□ 1.22
LINC00960-201ENST00000463183 KCNJ4P48050 445 aa22.7■■□□□ 1.22
LINC00960-201ENST00000463183 USP50Q70EL3 339 aaPredicted RBP22.7■■□□□ 1.22
LINC00960-201ENST00000463183 ZNF594Q96JF6 807 aaPredicted RBP22.7■■□□□ 1.22
LINC00960-201ENST00000463183 CNOT7Q9UIV1 285 aaKnown RBP22.7■■□□□ 1.22
LINC00960-201ENST00000463183 CCDC57Q2TAC2 916 aa22.69■■□□□ 1.22
LINC00960-201ENST00000463183 MICALL2Q8IY33 904 aa22.69■■□□□ 1.22
LINC00960-201ENST00000463183 DNAJC5GQ8N7S2 189 aa22.69■■□□□ 1.22
LINC00960-201ENST00000463183 FBXW7Q969H0 707 aa22.69■■□□□ 1.22
LINC00960-201ENST00000463183 H7C1D1 291 aa22.68■■□□□ 1.22
LINC00960-201ENST00000463183 CHRNDQ07001 517 aa22.68■■□□□ 1.22
LINC00960-201ENST00000463183 HELBQ8NG08 1087 aaPredicted RBP22.68■■□□□ 1.22
LINC00960-201ENST00000463183 NOB1Q9ULX3 412 aaKnown RBP22.68■■□□□ 1.22
LINC00960-201ENST00000463183 TAF5LO75529 589 aa22.67■■□□□ 1.22
LINC00960-201ENST00000463183 RBM26Q5T8P6 1007 aaKnown RBP22.67■■□□□ 1.22
LINC00960-201ENST00000463183 TRPM4Q8TD43 1214 aa22.67■■□□□ 1.22
LINC00960-201ENST00000463183 KLRG1Q96E93 195 aa22.67■■□□□ 1.22
LINC00960-201ENST00000463183 ANKRD2Q9GZV1 360 aa22.67■■□□□ 1.22
LINC00960-201ENST00000463183 ADAMTSL1Q8N6G6 1762 aa22.66■■□□□ 1.22
LINC00960-201ENST00000463183 PLIN1O60240 522 aa22.66■■□□□ 1.22
LINC00960-201ENST00000463183 ITGBL1O95965 494 aaPredicted RBP22.66■■□□□ 1.22
LINC00960-201ENST00000463183 CT47B1P0C2W7 299 aaPredicted RBP22.66■■□□□ 1.22
LINC00960-201ENST00000463183 CNNM1Q9NRU3 951 aa22.66■■□□□ 1.22
LINC00960-201ENST00000463183 ZNF804BA4D1E1 1349 aa22.66■■□□□ 1.22
LINC00960-201ENST00000463183 PASKQ96RG2 1323 aa22.66■■□□□ 1.22
LINC00960-201ENST00000463183 MED23Q9ULK4 1368 aa22.66■■□□□ 1.22
LINC00960-201ENST00000463183 SNAP23O00161 211 aa22.65■■□□□ 1.22
LINC00960-201ENST00000463183 KLRK1P26718 216 aa22.65■■□□□ 1.22
LINC00960-201ENST00000463183 FMR1Q06787 632 aaKnown RBP eCLIP22.65■■□□□ 1.22
LINC00960-201ENST00000463183 TBC1D10BQ4KMP7 808 aaPredicted RBP22.65■■□□□ 1.22
LINC00960-201ENST00000463183 SAMD7Q7Z3H4 446 aa22.65■■□□□ 1.22
LINC00960-201ENST00000463183 MKRN1Q9UHC7 482 aaKnown RBP22.65■■□□□ 1.22
LINC00960-201ENST00000463183 LEMD3Q9Y2U8 911 aa22.65■■□□□ 1.22
LINC00960-201ENST00000463183 LDHAL6AQ6ZMR3 332 aa22.64■■□□□ 1.22
LINC00960-201ENST00000463183 TXNRD3Q86VQ6 643 aa22.64■■□□□ 1.22
LINC00960-201ENST00000463183 KAZALD1Q96I82 304 aa22.64■■□□□ 1.22
LINC00960-201ENST00000463183 BICC1Q9H694 974 aaKnown RBP22.64■■□□□ 1.22
LINC00960-201ENST00000463183 SCN9AQ15858 1988 aa22.64■■□□□ 1.21
LINC00960-201ENST00000463183 TRAF5O00463 557 aa22.63■■□□□ 1.21
LINC00960-201ENST00000463183 RARSP54136 660 aaKnown RBP22.63■■□□□ 1.21
LINC00960-201ENST00000463183 CREBZFQ9NS37 354 aa22.63■■□□□ 1.21
LINC00960-201ENST00000463183 RPS12P25398 132 aaKnown RBP22.62■■□□□ 1.21
LINC00960-201ENST00000463183 HIRAP54198 1017 aaPredicted RBP22.62■■□□□ 1.21
LINC00960-201ENST00000463183 DPF2Q92785 391 aa22.62■■□□□ 1.21
LINC00960-201ENST00000463183 TMEM88BA6NKF7 163 aa22.61■■□□□ 1.21
LINC00960-201ENST00000463183 EGFRP00533 1210 aa22.61■■□□□ 1.21
LINC00960-201ENST00000463183 VIL1P09327 827 aaKnown RBP22.61■■□□□ 1.21
LINC00960-201ENST00000463183 RSBN1LQ6PCB5 846 aaPredicted RBP22.61■■□□□ 1.21
LINC00960-201ENST00000463183 PODNQ7Z5L7 613 aa22.61■■□□□ 1.21
LINC00960-201ENST00000463183 GLIS2Q9BZE0 524 aaPredicted RBP22.61■■□□□ 1.21
LINC00960-201ENST00000463183 API5Q9BZZ5 524 aaKnown RBP22.61■■□□□ 1.21
LINC00960-201ENST00000463183 USP44Q9H0E7 712 aa22.61■■□□□ 1.21
LINC00960-201ENST00000463183 UTYO14607 1347 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms