RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ZNF296Q8WUU4 475 aaPredicted RBP8.35□□□□□ -1.07
COPS3-205ENST00000463097 EAF1Q96JC9 268 aaPredicted RBP8.35□□□□□ -1.07
COPS3-205ENST00000463097 TRIM56Q9BRZ2 755 aaKnown RBP8.35□□□□□ -1.07
COPS3-205ENST00000463097 TIMMDC1Q9NPL8 285 aa8.35□□□□□ -1.07
COPS3-205ENST00000463097 EFR3BQ9Y2G0 817 aa8.35□□□□□ -1.07
COPS3-205ENST00000463097 MRPL42Q9Y6G3 142 aaKnown RBP8.35□□□□□ -1.07
COPS3-205ENST00000463097 XRCC5P13010 732 aaKnown RBP8.34□□□□□ -1.07
COPS3-205ENST00000463097 EDN3P14138 238 aa8.34□□□□□ -1.07
COPS3-205ENST00000463097 SMPD1P17405 629 aa8.34□□□□□ -1.07
COPS3-205ENST00000463097 PRPF40BQ6NWY9 871 aaKnown RBP8.34□□□□□ -1.07
COPS3-205ENST00000463097 RNF217Q8TC41 542 aa8.34□□□□□ -1.07
COPS3-205ENST00000463097 RNF166Q96A37 237 aaPredicted RBP8.34□□□□□ -1.07
COPS3-205ENST00000463097 LATS2Q9NRM7 1088 aa8.34□□□□□ -1.07
COPS3-205ENST00000463097 GINM1Q9NU53 330 aa8.34□□□□□ -1.07
COPS3-205ENST00000463097 STRIP2Q9ULQ0 834 aa8.34□□□□□ -1.07
COPS3-205ENST00000463097 PPM1HQ9ULR3 514 aa8.34□□□□□ -1.07
COPS3-205ENST00000463097 CLSTN1O94985 981 aa8.33□□□□□ -1.08
COPS3-205ENST00000463097 CYP2E1P05181 493 aaPredicted RBP8.33□□□□□ -1.08
COPS3-205ENST00000463097 HSD3B2P26439 372 aa8.33□□□□□ -1.08
COPS3-205ENST00000463097 ETFBP38117 255 aa8.33□□□□□ -1.08
COPS3-205ENST00000463097 CTC1Q2NKJ3 1217 aa8.33□□□□□ -1.08
COPS3-205ENST00000463097 PEAR1Q5VY43 1037 aaPredicted RBP8.33□□□□□ -1.08
COPS3-205ENST00000463097 SV2BQ7L1I2 683 aa8.33□□□□□ -1.08
COPS3-205ENST00000463097 OXCT2Q9BYC2 517 aaPredicted RBP8.33□□□□□ -1.08
COPS3-205ENST00000463097 BRD7Q9NPI1 651 aa8.33□□□□□ -1.08
COPS3-205ENST00000463097 TOR4AQ9NXH8 423 aa8.33□□□□□ -1.08
COPS3-205ENST00000463097 SIRPGQ9P1W8 387 aa8.33□□□□□ -1.08
COPS3-205ENST00000463097 AKAP2Q9Y2D5 859 aa8.33□□□□□ -1.08
COPS3-205ENST00000463097 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.33□□□□□ -1.08
COPS3-205ENST00000463097 TMEM238LA0A1B0GVL6 79 aa8.32□□□□□ -1.08
COPS3-205ENST00000463097 GDF9O60383 454 aa8.32□□□□□ -1.08
COPS3-205ENST00000463097 SOX9P48436 509 aa8.32□□□□□ -1.08
COPS3-205ENST00000463097 ANKS3Q6ZW76 656 aa8.32□□□□□ -1.08
COPS3-205ENST00000463097 HPS1Q92902 700 aa8.32□□□□□ -1.08
COPS3-205ENST00000463097 NT5C1AQ9BXI3 368 aa8.32□□□□□ -1.08
COPS3-205ENST00000463097 KCNQ5Q9NR82 932 aa8.32□□□□□ -1.08
COPS3-205ENST00000463097 KANSL3Q9P2N6 904 aa8.32□□□□□ -1.08
COPS3-205ENST00000463097 MRVI1Q9Y6F6 885 aa8.32□□□□□ -1.08
COPS3-205ENST00000463097 SASH3O75995 380 aa8.31□□□□□ -1.08
COPS3-205ENST00000463097 RHOQP17081 205 aa8.31□□□□□ -1.08
COPS3-205ENST00000463097 COL9A2Q14055 689 aaPredicted RBP8.31□□□□□ -1.08
COPS3-205ENST00000463097 MAP3K11Q16584 847 aa8.31□□□□□ -1.08
COPS3-205ENST00000463097 FBXL19Q6PCT2 694 aa8.31□□□□□ -1.08
COPS3-205ENST00000463097 DTHD1Q6ZMT9 781 aa8.31□□□□□ -1.08
COPS3-205ENST00000463097 ZCCHC2Q9C0B9 1178 aaKnown RBP8.31□□□□□ -1.08
COPS3-205ENST00000463097 CRISPLD1Q9H336 500 aa8.31□□□□□ -1.08
COPS3-205ENST00000463097 ABCB6Q9NP58 842 aa8.31□□□□□ -1.08
COPS3-205ENST00000463097 SALL4Q9UJQ4 1053 aa8.31□□□□□ -1.08
COPS3-205ENST00000463097 PHF20L1A8MW92 1017 aa8.3□□□□□ -1.08
COPS3-205ENST00000463097 KLF4O43474 513 aa8.3□□□□□ -1.08
COPS3-205ENST00000463097 BMP2P12643 396 aa8.3□□□□□ -1.08
COPS3-205ENST00000463097 IFFO2Q5TF58 517 aa8.3□□□□□ -1.08
COPS3-205ENST00000463097 OR13H1Q8NG92 308 aa8.3□□□□□ -1.08
COPS3-205ENST00000463097 RHOVQ96L33 236 aa8.3□□□□□ -1.08
COPS3-205ENST00000463097 TRIM55Q9BYV6 548 aa8.3□□□□□ -1.08
COPS3-205ENST00000463097 LIN7BQ9HAP6 207 aa8.3□□□□□ -1.08
COPS3-205ENST00000463097 ZFYVE1Q9HBF4 777 aa8.3□□□□□ -1.08
COPS3-205ENST00000463097 SUPT16HQ9Y5B9 1047 aaKnown RBP8.3□□□□□ -1.08
COPS3-205ENST00000463097 U2SURPO15042 1029 aaKnown RBP8.29□□□□□ -1.08
COPS3-205ENST00000463097 CAPN5O15484 640 aaPredicted RBP8.29□□□□□ -1.08
COPS3-205ENST00000463097 GREM1O60565 184 aa8.29□□□□□ -1.08
COPS3-205ENST00000463097 FBXO24O75426 580 aa8.29□□□□□ -1.08
COPS3-205ENST00000463097 KCNQ4P56696 695 aa8.29□□□□□ -1.08
COPS3-205ENST00000463097 FAM160A1Q05DH4 1040 aa8.29□□□□□ -1.08
COPS3-205ENST00000463097 RAB33AQ14088 237 aa8.29□□□□□ -1.08
COPS3-205ENST00000463097 SAMD5Q5TGI4 173 aa8.29□□□□□ -1.08
COPS3-205ENST00000463097 NLRP8Q86W28 1048 aa8.29□□□□□ -1.08
COPS3-205ENST00000463097 PHC3Q8NDX5 983 aa8.29□□□□□ -1.08
COPS3-205ENST00000463097 CPLX3Q8WVH0 158 aa8.29□□□□□ -1.08
COPS3-205ENST00000463097 GPATCH3Q96I76 525 aa8.29□□□□□ -1.08
COPS3-205ENST00000463097 SRPK1Q96SB4 655 aaKnown RBP8.29□□□□□ -1.08
COPS3-205ENST00000463097 TNFRSF10AO00220 468 aa8.28□□□□□ -1.08
COPS3-205ENST00000463097 MMP20O60882 483 aa8.28□□□□□ -1.08
COPS3-205ENST00000463097 PF4P02776 101 aa8.28□□□□□ -1.08
COPS3-205ENST00000463097 GARTP22102 1010 aa8.28□□□□□ -1.08
COPS3-205ENST00000463097 TARSP26639 723 aaKnown RBP8.28□□□□□ -1.08
COPS3-205ENST00000463097 CCINQ13939 588 aa8.28□□□□□ -1.08
COPS3-205ENST00000463097 PTPROQ16827 1216 aa8.28□□□□□ -1.08
COPS3-205ENST00000463097 C6orf118Q5T5N4 469 aa8.28□□□□□ -1.08
COPS3-205ENST00000463097 TPTE2Q6XPS3 522 aa8.28□□□□□ -1.08
COPS3-205ENST00000463097 KRT25Q7Z3Z0 450 aa8.28□□□□□ -1.08
COPS3-205ENST00000463097 TCF12Q99081 682 aa8.28□□□□□ -1.08
COPS3-205ENST00000463097 RUBCNLQ9H714 662 aa8.28□□□□□ -1.08
COPS3-205ENST00000463097 GPAMQ9HCL2 828 aa8.28□□□□□ -1.08
COPS3-205ENST00000463097 KCNH4Q9UQ05 1017 aa8.28□□□□□ -1.08
COPS3-205ENST00000463097 ENPP3O14638 875 aa8.27□□□□□ -1.09
COPS3-205ENST00000463097 LIG3P49916 1009 aa8.27□□□□□ -1.09
COPS3-205ENST00000463097 CCNJLQ8IV13 435 aa8.27□□□□□ -1.09
COPS3-205ENST00000463097 PGBD3Q8N328 593 aa8.27□□□□□ -1.09
COPS3-205ENST00000463097 RNPC3Q96LT9 517 aaKnown RBP8.27□□□□□ -1.09
COPS3-205ENST00000463097 GSX2Q9BZM3 304 aa8.27□□□□□ -1.09
COPS3-205ENST00000463097 CEP44Q9C0F1 390 aa8.27□□□□□ -1.09
COPS3-205ENST00000463097 UBP1Q9NZI7 540 aa8.27□□□□□ -1.09
COPS3-205ENST00000463097 TLR6Q9Y2C9 796 aa8.27□□□□□ -1.09
COPS3-205ENST00000463097 F11P03951 625 aa8.26□□□□□ -1.09
COPS3-205ENST00000463097 LMNB2Q03252 620 aa8.26□□□□□ -1.09
COPS3-205ENST00000463097 APOBRQ0VD83 1088 aa8.26□□□□□ -1.09
COPS3-205ENST00000463097 CAMK2GQ13555 558 aaPredicted RBP8.26□□□□□ -1.09
COPS3-205ENST00000463097 SNAP47Q5SQN1 464 aa8.26□□□□□ -1.09
COPS3-205ENST00000463097 RNF187Q5TA31 235 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms