RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 MYD88Q99836 296 aa25.73■■□□□ 1.71
HLA-F-222ENST00000462777 PHAXQ9H814 394 aaKnown RBP25.73■■□□□ 1.71
HLA-F-222ENST00000462777 ANKIB1Q9P2G1 1089 aa25.73■■□□□ 1.71
HLA-F-222ENST00000462777 TBC1D10BQ4KMP7 808 aaPredicted RBP25.72■■□□□ 1.71
HLA-F-222ENST00000462777 KRT26Q7Z3Y9 468 aa25.72■■□□□ 1.71
HLA-F-222ENST00000462777 DCPSQ96C86 337 aaKnown RBP25.72■■□□□ 1.71
HLA-F-222ENST00000462777 TRPM7Q96QT4 1865 aa25.71■■□□□ 1.71
HLA-F-222ENST00000462777 BRPF1P55201 1214 aaPredicted RBP25.71■■□□□ 1.71
HLA-F-222ENST00000462777 RBM26Q5T8P6 1007 aaKnown RBP25.71■■□□□ 1.71
HLA-F-222ENST00000462777 CWC25Q9NXE8 425 aaPredicted RBP25.71■■□□□ 1.71
HLA-F-222ENST00000462777 PODXL2Q9NZ53 605 aa25.71■■□□□ 1.71
HLA-F-222ENST00000462777 GGA1Q9UJY5 639 aa25.71■■□□□ 1.71
HLA-F-222ENST00000462777 DUOX1Q9NRD9 1551 aa25.7■■□□□ 1.71
HLA-F-222ENST00000462777 UFL1O94874 794 aa25.7■■□□□ 1.7
HLA-F-222ENST00000462777 PCCAP05165 728 aaPredicted RBP25.7■■□□□ 1.7
HLA-F-222ENST00000462777 HUNKP57058 714 aa25.7■■□□□ 1.7
HLA-F-222ENST00000462777 CCDC30Q5VVM6 783 aa25.7■■□□□ 1.7
HLA-F-222ENST00000462777 PDE8AO60658 829 aa25.69■■□□□ 1.7
HLA-F-222ENST00000462777 NOGQ13253 232 aa25.69■■□□□ 1.7
HLA-F-222ENST00000462777 SEC31BQ9NQW1 1179 aa25.69■■□□□ 1.7
HLA-F-222ENST00000462777 C2orf69Q8N8R5 385 aa25.68■■□□□ 1.7
HLA-F-222ENST00000462777 KCNQ5Q9NR82 932 aa25.68■■□□□ 1.7
HLA-F-222ENST00000462777 TSKSQ9UJT2 592 aa25.68■■□□□ 1.7
HLA-F-222ENST00000462777 THSD7BQ9C0I4 1608 aa25.67■■□□□ 1.7
HLA-F-222ENST00000462777 LRRC37AA6NMS7 1700 aa25.67■■□□□ 1.7
HLA-F-222ENST00000462777 VIL1P09327 827 aaKnown RBP25.67■■□□□ 1.7
HLA-F-222ENST00000462777 METTL22Q9BUU2 404 aaPredicted RBP25.67■■□□□ 1.7
HLA-F-222ENST00000462777 DDX60Q8IY21 1712 aaKnown RBP25.66■■□□□ 1.7
HLA-F-222ENST00000462777 KIF4BQ2VIQ3 1234 aa25.66■■□□□ 1.7
HLA-F-222ENST00000462777 ANKRD18AQ8IVF6 992 aa25.66■■□□□ 1.7
HLA-F-222ENST00000462777 C8orf58Q8NAV2 365 aa25.66■■□□□ 1.7
HLA-F-222ENST00000462777 GBA2Q9HCG7 927 aaPredicted RBP25.66■■□□□ 1.7
HLA-F-222ENST00000462777 RTL9Q8NET4 1388 aa25.66■■□□□ 1.7
HLA-F-222ENST00000462777 SULF1Q8IWU6 871 aa25.65■■□□□ 1.7
HLA-F-222ENST00000462777 TAF1P21675 1872 aa25.65■■□□□ 1.7
HLA-F-222ENST00000462777 CCDC85AQ96PX6 553 aaPredicted RBP25.64■■□□□ 1.7
HLA-F-222ENST00000462777 CCDC85CA6NKD9 419 aa25.63■■□□□ 1.69
HLA-F-222ENST00000462777 EGFRP00533 1210 aa25.63■■□□□ 1.69
HLA-F-222ENST00000462777 RGMBQ6NW40 437 aa25.63■■□□□ 1.69
HLA-F-222ENST00000462777 JARID2Q92833 1246 aaPredicted RBP25.63■■□□□ 1.69
HLA-F-222ENST00000462777 CCDC102AQ96A19 550 aa25.63■■□□□ 1.69
HLA-F-222ENST00000462777 CDC5LQ99459 802 aaKnown RBP25.63■■□□□ 1.69
HLA-F-222ENST00000462777 MAP3K2Q9Y2U5 619 aa25.63■■□□□ 1.69
HLA-F-222ENST00000462777 XDHP47989 1333 aa25.63■■□□□ 1.69
HLA-F-222ENST00000462777 ATP2B4P23634 1241 aa25.62■■□□□ 1.69
HLA-F-222ENST00000462777 NEXNQ0ZGT2 675 aa25.62■■□□□ 1.69
HLA-F-222ENST00000462777 DLK2Q6UY11 383 aa25.62■■□□□ 1.69
HLA-F-222ENST00000462777 AGBL3Q8NEM8 1001 aa25.62■■□□□ 1.69
HLA-F-222ENST00000462777 STK31Q9BXU1 1019 aa25.62■■□□□ 1.69
HLA-F-222ENST00000462777 ADM5C9JUS6 153 aa25.61■■□□□ 1.69
HLA-F-222ENST00000462777 RSBN1LQ6PCB5 846 aaPredicted RBP25.61■■□□□ 1.69
HLA-F-222ENST00000462777 KSR2Q6VAB6 950 aa25.61■■□□□ 1.69
HLA-F-222ENST00000462777 GGA3Q9NZ52 723 aa25.6■■□□□ 1.69
HLA-F-222ENST00000462777 ZNF157P51786 506 aaPredicted RBP25.59■■□□□ 1.69
HLA-F-222ENST00000462777 PODNQ7Z5L7 613 aa25.59■■□□□ 1.69
HLA-F-222ENST00000462777 PI4KAP2A4QPH2 592 aa25.58■■□□□ 1.69
HLA-F-222ENST00000462777 CTSWP56202 376 aa25.58■■□□□ 1.69
HLA-F-222ENST00000462777 ZNF280AP59817 542 aaPredicted RBP25.58■■□□□ 1.69
HLA-F-222ENST00000462777 PI4KAP1Q8N8J0 262 aa25.58■■□□□ 1.69
HLA-F-222ENST00000462777 USP17L3A6NCW0 530 aa25.57■■□□□ 1.68
HLA-F-222ENST00000462777 USP17L4A6NCW7 530 aa25.57■■□□□ 1.68
HLA-F-222ENST00000462777 USP17L8P0C7I0 530 aa25.57■■□□□ 1.68
HLA-F-222ENST00000462777 SCARF1Q14162 830 aa25.57■■□□□ 1.68
HLA-F-222ENST00000462777 USP17L1Q7RTZ2 530 aa25.57■■□□□ 1.68
HLA-F-222ENST00000462777 TSPYL6Q8N831 410 aa25.57■■□□□ 1.68
HLA-F-222ENST00000462777 ZIC5Q96T25 663 aa25.57■■□□□ 1.68
HLA-F-222ENST00000462777 COL4A1P02462 1669 aa25.56■■□□□ 1.68
HLA-F-222ENST00000462777 MCOLN1Q9GZU1 580 aa25.56■■□□□ 1.68
HLA-F-222ENST00000462777 BSDC1Q9NW68 430 aaPredicted RBP25.56■■□□□ 1.68
HLA-F-222ENST00000462777 ANGEL2Q5VTE6 544 aaKnown RBP25.55■■□□□ 1.68
HLA-F-222ENST00000462777 TTLL11Q8NHH1 800 aa25.55■■□□□ 1.68
HLA-F-222ENST00000462777 FAM155AB1AL88 458 aaPredicted RBP25.54■■□□□ 1.68
HLA-F-222ENST00000462777 IGKV5-2P06315 115 aa25.54■■□□□ 1.68
HLA-F-222ENST00000462777 KIF23Q02241 960 aaPredicted RBP25.54■■□□□ 1.68
HLA-F-222ENST00000462777 DGKZQ13574 1117 aa25.54■■□□□ 1.68
HLA-F-222ENST00000462777 FAM161AQ3B820 660 aa25.54■■□□□ 1.68
HLA-F-222ENST00000462777 CDCA5Q96FF9 252 aa25.54■■□□□ 1.68
HLA-F-222ENST00000462777 MYOZ2Q9NPC6 264 aa25.54■■□□□ 1.68
HLA-F-222ENST00000462777 SAGE1Q9NXZ1 904 aa25.54■■□□□ 1.68
HLA-F-222ENST00000462777 TSR2Q969E8 191 aaKnown RBP25.53■■□□□ 1.68
HLA-F-222ENST00000462777 MINPP1Q9UNW1 487 aa25.53■■□□□ 1.68
HLA-F-222ENST00000462777 ZNF609O15014 1411 aa25.53■■□□□ 1.68
HLA-F-222ENST00000462777 ZNF316A6NFI3 1004 aaPredicted RBP25.52■■□□□ 1.68
HLA-F-222ENST00000462777 MLLT1Q03111 559 aaPredicted RBP25.52■■□□□ 1.68
HLA-F-222ENST00000462777 CCDC27Q2M243 656 aa25.52■■□□□ 1.68
HLA-F-222ENST00000462777 TWISTNBQ3B726 338 aaPredicted RBP25.52■■□□□ 1.68
HLA-F-222ENST00000462777 GMLQ99445 158 aa25.52■■□□□ 1.68
HLA-F-222ENST00000462777 GREM2Q9H772 168 aa25.52■■□□□ 1.68
HLA-F-222ENST00000462777 ASTN2O75129 1339 aaPredicted RBP25.52■■□□□ 1.68
HLA-F-222ENST00000462777 SLC4A2P04920 1241 aa25.51■■□□□ 1.67
HLA-F-222ENST00000462777 IGHMBP2P38935 993 aaKnown RBP25.51■■□□□ 1.67
HLA-F-222ENST00000462777 FKBP1BP68106 108 aa25.51■■□□□ 1.67
HLA-F-222ENST00000462777 REM2Q8IYK8 340 aaPredicted RBP25.51■■□□□ 1.67
HLA-F-222ENST00000462777 OGFOD1Q8N543 542 aa25.51■■□□□ 1.67
HLA-F-222ENST00000462777 PITPNM2Q9BZ72 1349 aa25.51■■□□□ 1.67
HLA-F-222ENST00000462777 NEURL1BA8MQ27 555 aa25.5■■□□□ 1.67
HLA-F-222ENST00000462777 SLC10A3P09131 477 aa25.5■■□□□ 1.67
HLA-F-222ENST00000462777 CCT4P50991 539 aaKnown RBP25.5■■□□□ 1.67
HLA-F-222ENST00000462777 CWF19L2Q2TBE0 894 aaKnown RBP25.5■■□□□ 1.67
HLA-F-222ENST00000462777 MED23Q9ULK4 1368 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms