RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 PITPNM2Q9BZ72 1349 aa20.11■□□□□ 0.81
APP-211ENST00000462267 EIF2S2P20042 333 aaKnown RBP20.11■□□□□ 0.81
APP-211ENST00000462267 AGBL3Q8NEM8 1001 aa20.11■□□□□ 0.81
APP-211ENST00000462267 NECTIN2Q92692 538 aa20.11■□□□□ 0.81
APP-211ENST00000462267 CELF1Q92879 486 aaKnown RBP20.11■□□□□ 0.81
APP-211ENST00000462267 TAF1P21675 1872 aa20.1■□□□□ 0.81
APP-211ENST00000462267 FKTNO75072 461 aa20.1■□□□□ 0.81
APP-211ENST00000462267 PPP2R1AP30153 589 aa20.1■□□□□ 0.81
APP-211ENST00000462267 SF3B3Q15393 1217 aaKnown RBP20.1■□□□□ 0.81
APP-211ENST00000462267 PROSER3Q2NL68 480 aa20.1■□□□□ 0.81
APP-211ENST00000462267 COPS6Q7L5N1 327 aa20.1■□□□□ 0.81
APP-211ENST00000462267 TBC1D16Q8TBP0 767 aa20.1■□□□□ 0.81
APP-211ENST00000462267 CFHR5Q9BXR6 569 aa20.1■□□□□ 0.81
APP-211ENST00000462267 UBE2Q2LH0YL09 131 aa20.09■□□□□ 0.81
APP-211ENST00000462267 ANXA1P04083 346 aa20.09■□□□□ 0.81
APP-211ENST00000462267 ZC3H12CQ9C0D7 883 aaKnown RBP20.09■□□□□ 0.81
APP-211ENST00000462267 DDX60Q8IY21 1712 aaKnown RBP20.09■□□□□ 0.81
APP-211ENST00000462267 ZNF609O15014 1411 aa20.09■□□□□ 0.81
APP-211ENST00000462267 SREBF2Q12772 1141 aa20.08■□□□□ 0.81
APP-211ENST00000462267 INTS3Q68E01 1043 aaKnown RBP20.08■□□□□ 0.81
APP-211ENST00000462267 G3V3G9 751 aa20.07■□□□□ 0.8
APP-211ENST00000462267 AIMP1Q12904 312 aaKnown RBP20.07■□□□□ 0.8
APP-211ENST00000462267 NFE2L2Q16236 605 aa20.07■□□□□ 0.8
APP-211ENST00000462267 DCAF8Q5TAQ9 597 aa20.07■□□□□ 0.8
APP-211ENST00000462267 RSBN1LQ6PCB5 846 aaPredicted RBP20.07■□□□□ 0.8
APP-211ENST00000462267 MOB2Q70IA6 237 aa20.07■□□□□ 0.8
APP-211ENST00000462267 XAGE3Q8WTP9 111 aa20.07■□□□□ 0.8
APP-211ENST00000462267 TSPYL4Q9UJ04 414 aa20.07■□□□□ 0.8
APP-211ENST00000462267 FXR1P51114 621 aaKnown RBP eCLIP20.06■□□□□ 0.8
APP-211ENST00000462267 MYOZ2Q9NPC6 264 aa20.06■□□□□ 0.8
APP-211ENST00000462267 PODXL2Q9NZ53 605 aa20.06■□□□□ 0.8
APP-211ENST00000462267 USP17L8P0C7I0 530 aa20.05■□□□□ 0.8
APP-211ENST00000462267 RPS8P62241 208 aaKnown RBP20.05■□□□□ 0.8
APP-211ENST00000462267 DLG5Q8TDM6 1919 aa20.05■□□□□ 0.8
APP-211ENST00000462267 MKI67P46013 3256 aaKnown RBP20.05■□□□□ 0.8
APP-211ENST00000462267 SCN9AQ15858 1988 aa20.04■□□□□ 0.8
APP-211ENST00000462267 TTLL12Q14166 644 aaPredicted RBP20.04■□□□□ 0.8
APP-211ENST00000462267 PLEKHF1Q96S99 279 aa20.04■□□□□ 0.8
APP-211ENST00000462267 GMLQ99445 158 aa20.04■□□□□ 0.8
APP-211ENST00000462267 POTEFA5A3E0 1075 aa20.03■□□□□ 0.8
APP-211ENST00000462267 ALDH1A1P00352 501 aa20.03■□□□□ 0.8
APP-211ENST00000462267 FAM89AQ96GI7 184 aa20.03■□□□□ 0.8
APP-211ENST00000462267 R3HDMLQ9H3Y0 253 aa20.03■□□□□ 0.8
APP-211ENST00000462267 BABAM1Q9NWV8 329 aa20.03■□□□□ 0.8
APP-211ENST00000462267 UFL1O94874 794 aa20.02■□□□□ 0.8
APP-211ENST00000462267 NF2P35240 595 aa20.02■□□□□ 0.8
APP-211ENST00000462267 MKRN3Q13064 507 aaKnown RBP20.01■□□□□ 0.79
APP-211ENST00000462267 PRAMEF18Q5VWM3 479 aa20.01■□□□□ 0.79
APP-211ENST00000462267 ANKIB1Q9P2G1 1089 aa20.01■□□□□ 0.79
APP-211ENST00000462267 GGA1Q9UJY5 639 aa20.01■□□□□ 0.79
APP-211ENST00000462267 TRIM17Q9Y577 477 aa20.01■□□□□ 0.79
APP-211ENST00000462267 ZNF428Q96B54 188 aa20■□□□□ 0.79
APP-211ENST00000462267 ISCA1Q9BUE6 129 aa20■□□□□ 0.79
APP-211ENST00000462267 SCAF8Q9UPN6 1271 aaKnown RBP20■□□□□ 0.79
APP-211ENST00000462267 OTOP1Q7RTM1 612 aa19.99■□□□□ 0.79
APP-211ENST00000462267 ARMC9Q7Z3E5 817 aa19.99■□□□□ 0.79
APP-211ENST00000462267 PLBD2Q8NHP8 589 aa19.99■□□□□ 0.79
APP-211ENST00000462267 PNNQ9H307 717 aaKnown RBP19.99■□□□□ 0.79
APP-211ENST00000462267 HTTP42858 3142 aa19.99■□□□□ 0.79
APP-211ENST00000462267 KIAA0100Q14667 2235 aaKnown RBP19.99■□□□□ 0.79
APP-211ENST00000462267 COL4A1P02462 1669 aa19.98■□□□□ 0.79
APP-211ENST00000462267 USP17L3A6NCW0 530 aa19.98■□□□□ 0.79
APP-211ENST00000462267 USP17L4A6NCW7 530 aa19.98■□□□□ 0.79
APP-211ENST00000462267 INHBEP58166 350 aa19.98■□□□□ 0.79
APP-211ENST00000462267 PTPN12Q05209 780 aaKnown RBP19.98■□□□□ 0.79
APP-211ENST00000462267 NBPF9Q3BBW0 867 aa19.98■□□□□ 0.79
APP-211ENST00000462267 USP17L1Q7RTZ2 530 aa19.98■□□□□ 0.79
APP-211ENST00000462267 PODNQ7Z5L7 613 aa19.98■□□□□ 0.79
APP-211ENST00000462267 MAPK8IP3Q9UPT6 1336 aa19.98■□□□□ 0.79
APP-211ENST00000462267 IRS4O14654 1257 aaPredicted RBP19.97■□□□□ 0.79
APP-211ENST00000462267 SPRYD7Q5W111 196 aa19.97■□□□□ 0.79
APP-211ENST00000462267 ANKRD13DQ6ZTN6 518 aa19.97■□□□□ 0.79
APP-211ENST00000462267 MANSC4A6NHS7 340 aaPredicted RBP19.95■□□□□ 0.78
APP-211ENST00000462267 ATP5J2-PTCD1G3V325 749 aa19.95■□□□□ 0.78
APP-211ENST00000462267 HSP90B1P14625 803 aaKnown RBP19.95■□□□□ 0.78
APP-211ENST00000462267 TRIM28Q13263 835 aaKnown RBP19.95■□□□□ 0.78
APP-211ENST00000462267 RTL5Q5HYW3 569 aaPredicted RBP19.95■□□□□ 0.78
APP-211ENST00000462267 LDLRAD1Q5T700 205 aa19.95■□□□□ 0.78
APP-211ENST00000462267 OGFOD1Q8N543 542 aa19.95■□□□□ 0.78
APP-211ENST00000462267 ARMC5Q96C12 935 aa19.95■□□□□ 0.78
APP-211ENST00000462267 PTPN22Q9Y2R2 807 aa19.95■□□□□ 0.78
APP-211ENST00000462267 PSME4Q14997 1843 aa19.95■□□□□ 0.78
APP-211ENST00000462267 RBBP6Q7Z6E9 1792 aaKnown RBP19.94■□□□□ 0.78
APP-211ENST00000462267 WNT10BO00744 389 aa19.94■□□□□ 0.78
APP-211ENST00000462267 EN2P19622 333 aaPredicted RBP19.94■□□□□ 0.78
APP-211ENST00000462267 IFNL1Q8IU54 200 aa19.94■□□□□ 0.78
APP-211ENST00000462267 ERO1AQ96HE7 468 aa19.94■□□□□ 0.78
APP-211ENST00000462267 SEC31BQ9NQW1 1179 aa19.94■□□□□ 0.78
APP-211ENST00000462267 COLQQ9Y215 455 aaPredicted RBP19.94■□□□□ 0.78
APP-211ENST00000462267 MMP14P50281 582 aa19.93■□□□□ 0.78
APP-211ENST00000462267 CHPF2Q9P2E5 772 aa19.93■□□□□ 0.78
APP-211ENST00000462267 XDHP47989 1333 aa19.93■□□□□ 0.78
APP-211ENST00000462267 ATP2B4P23634 1241 aa19.92■□□□□ 0.78
APP-211ENST00000462267 PRKG1Q13976 671 aa19.91■□□□□ 0.78
APP-211ENST00000462267 CCDC152Q4G0S7 254 aa19.91■□□□□ 0.78
APP-211ENST00000462267 APOBEC3FQ8IUX4 373 aaKnown RBP19.91■□□□□ 0.78
APP-211ENST00000462267 TMEM106CQ9BVX2 250 aa19.91■□□□□ 0.78
APP-211ENST00000462267 ANGEL1Q9UNK9 670 aaKnown RBP19.91■□□□□ 0.78
APP-211ENST00000462267 MYO3BQ8WXR4 1341 aa19.91■□□□□ 0.78
APP-211ENST00000462267 CENPFP49454 3210 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms