RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 SPACA7Q96KW9 195 aa9.95□□□□□ -0.82
CALD1-213ENST00000462181 RBSNQ9H1K0 784 aa9.95□□□□□ -0.82
CALD1-213ENST00000462181 FOXD3Q9UJU5 478 aaPredicted RBP9.95□□□□□ -0.82
CALD1-213ENST00000462181 STARD13Q9Y3M8 1113 aa9.95□□□□□ -0.82
CALD1-213ENST00000462181 M0R082 166 aa9.94□□□□□ -0.82
CALD1-213ENST00000462181 ELMSAN1Q6PJG2 1045 aa9.94□□□□□ -0.82
CALD1-213ENST00000462181 NCAPG2Q86XI2 1143 aa9.94□□□□□ -0.82
CALD1-213ENST00000462181 BEND7Q8N7W2 519 aaPredicted RBP9.94□□□□□ -0.82
CALD1-213ENST00000462181 ZNF417Q8TAU3 575 aa9.94□□□□□ -0.82
CALD1-213ENST00000462181 NUDT8Q8WV74 236 aa9.94□□□□□ -0.82
CALD1-213ENST00000462181 DMRTB1Q96MA1 342 aa9.94□□□□□ -0.82
CALD1-213ENST00000462181 ZNF587Q96SQ5 575 aaPredicted RBP9.94□□□□□ -0.82
CALD1-213ENST00000462181 RGS9O75916 674 aaPredicted RBP9.93□□□□□ -0.82
CALD1-213ENST00000462181 ALBP02768 609 aa9.93□□□□□ -0.82
CALD1-213ENST00000462181 SNRPNP63162 240 aaKnown RBP9.93□□□□□ -0.82
CALD1-213ENST00000462181 ZSCAN29Q8IWY8 852 aaPredicted RBP9.93□□□□□ -0.82
CALD1-213ENST00000462181 MICALL1Q8N3F8 863 aa9.93□□□□□ -0.82
CALD1-213ENST00000462181 SCARF2Q96GP6 870 aaPredicted RBP9.93□□□□□ -0.82
CALD1-213ENST00000462181 KANSL3Q9P2N6 904 aa9.93□□□□□ -0.82
CALD1-213ENST00000462181 NAGPAQ9UK23 515 aa9.93□□□□□ -0.82
CALD1-213ENST00000462181 MKL2Q9ULH7 1088 aa9.93□□□□□ -0.82
CALD1-213ENST00000462181 DGKGP49619 791 aa9.92□□□□□ -0.82
CALD1-213ENST00000462181 PERM1Q5SV97 790 aa9.92□□□□□ -0.82
CALD1-213ENST00000462181 COL13A1Q5TAT6 717 aaPredicted RBP9.92□□□□□ -0.82
CALD1-213ENST00000462181 C20orf204Q6ZNR8 217 aa9.92□□□□□ -0.82
CALD1-213ENST00000462181 TMC7Q7Z402 723 aa9.92□□□□□ -0.82
CALD1-213ENST00000462181 NIF3L1Q9GZT8 377 aa9.92□□□□□ -0.82
CALD1-213ENST00000462181 CHRDQ9H2X0 955 aa9.92□□□□□ -0.82
CALD1-213ENST00000462181 JPH1Q9HDC5 661 aaPredicted RBP9.92□□□□□ -0.82
CALD1-213ENST00000462181 FRRS1LQ9P0K9 344 aa9.92□□□□□ -0.82
CALD1-213ENST00000462181 CNTNAP5Q8WYK1 1306 aa9.91□□□□□ -0.82
CALD1-213ENST00000462181 EREGO14944 169 aa9.91□□□□□ -0.82
CALD1-213ENST00000462181 LILRB5O75023 590 aa9.91□□□□□ -0.82
CALD1-213ENST00000462181 LPIN3Q9BQK8 851 aa9.91□□□□□ -0.82
CALD1-213ENST00000462181 SMG9Q9H0W8 520 aaKnown RBP9.91□□□□□ -0.82
CALD1-213ENST00000462181 ZFYVE28Q9HCC9 887 aa9.91□□□□□ -0.82
CALD1-213ENST00000462181 PIK3R2O00459 728 aa9.9□□□□□ -0.82
CALD1-213ENST00000462181 GPR182O15218 404 aa9.9□□□□□ -0.82
CALD1-213ENST00000462181 KIF4AO95239 1232 aa9.9□□□□□ -0.82
CALD1-213ENST00000462181 HOXB4P17483 251 aaPredicted RBP9.9□□□□□ -0.82
CALD1-213ENST00000462181 C8orf86Q6ZUL3 223 aa9.9□□□□□ -0.82
CALD1-213ENST00000462181 PLD4Q96BZ4 506 aa9.9□□□□□ -0.82
CALD1-213ENST00000462181 SALL4Q9UJQ4 1053 aa9.9□□□□□ -0.82
CALD1-213ENST00000462181 IGHA2P01877 340 aa9.89□□□□□ -0.83
CALD1-213ENST00000462181 LINC00114Q6XXX2 140 aa9.89□□□□□ -0.83
CALD1-213ENST00000462181 ASB16Q96NS5 453 aa9.89□□□□□ -0.83
CALD1-213ENST00000462181 AMOTL2Q9Y2J4 779 aa9.89□□□□□ -0.83
CALD1-213ENST00000462181 PLCB3Q01970 1234 aa9.88□□□□□ -0.83
CALD1-213ENST00000462181 ORC1Q13415 861 aa9.88□□□□□ -0.83
CALD1-213ENST00000462181 ALKBH8Q96BT7 664 aaKnown RBP9.88□□□□□ -0.83
CALD1-213ENST00000462181 PRDM6Q9NQX0 595 aa9.88□□□□□ -0.83
CALD1-213ENST00000462181 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.88□□□□□ -0.83
CALD1-213ENST00000462181 GNB5O14775 395 aa9.87□□□□□ -0.83
CALD1-213ENST00000462181 CPNE3O75131 537 aaKnown RBP9.87□□□□□ -0.83
CALD1-213ENST00000462181 EDN3P14138 238 aa9.87□□□□□ -0.83
CALD1-213ENST00000462181 CEP120Q8N960 986 aa9.87□□□□□ -0.83
CALD1-213ENST00000462181 TTC9Q92623 222 aa9.87□□□□□ -0.83
CALD1-213ENST00000462181 RNF225M0QZC1 329 aaPredicted RBP9.86□□□□□ -0.83
CALD1-213ENST00000462181 SMNDC1O75940 238 aaKnown RBP eCLIP9.86□□□□□ -0.83
CALD1-213ENST00000462181 AFF1P51825 1210 aaKnown RBP9.86□□□□□ -0.83
CALD1-213ENST00000462181 CCDC27Q2M243 656 aa9.86□□□□□ -0.83
CALD1-213ENST00000462181 DNAJC25Q9H1X3 360 aa9.86□□□□□ -0.83
CALD1-213ENST00000462181 EIF1AYO14602 144 aaKnown RBP9.85□□□□□ -0.83
CALD1-213ENST00000462181 TREHO43280 583 aa9.85□□□□□ -0.83
CALD1-213ENST00000462181 POLR3DP05423 398 aaPredicted RBP9.85□□□□□ -0.83
CALD1-213ENST00000462181 ATP11AP98196 1134 aa9.85□□□□□ -0.83
CALD1-213ENST00000462181 CEP135Q66GS9 1140 aa9.85□□□□□ -0.83
CALD1-213ENST00000462181 CSRNP1Q96S65 589 aa9.85□□□□□ -0.83
CALD1-213ENST00000462181 PBX4Q9BYU1 374 aa9.85□□□□□ -0.83
CALD1-213ENST00000462181 RASSF4Q9H2L5 321 aa9.85□□□□□ -0.83
CALD1-213ENST00000462181 DSC3Q14574 896 aa9.84□□□□□ -0.83
CALD1-213ENST00000462181 USPL1Q5W0Q7 1092 aa9.84□□□□□ -0.83
CALD1-213ENST00000462181 GDF6Q6KF10 455 aaPredicted RBP9.84□□□□□ -0.83
CALD1-213ENST00000462181 PLVAPQ9BX97 442 aa9.84□□□□□ -0.83
CALD1-213ENST00000462181 SPDYE3A6NKU9 549 aa9.83□□□□□ -0.84
CALD1-213ENST00000462181 NID1P14543 1247 aa9.83□□□□□ -0.84
CALD1-213ENST00000462181 IRS1P35568 1242 aa9.83□□□□□ -0.84
CALD1-213ENST00000462181 TRAPPC3LQ5T215 181 aa9.83□□□□□ -0.84
CALD1-213ENST00000462181 GALNT12Q8IXK2 581 aa9.83□□□□□ -0.84
CALD1-213ENST00000462181 OSMRQ99650 979 aa9.83□□□□□ -0.84
CALD1-213ENST00000462181 DZANK1Q9NVP4 752 aa9.83□□□□□ -0.84
CALD1-213ENST00000462181 NOP53Q9NZM5 478 aaKnown RBP9.83□□□□□ -0.84
CALD1-213ENST00000462181 ACPPP15309 386 aa9.82□□□□□ -0.84
CALD1-213ENST00000462181 TRIM26Q12899 539 aaPredicted RBP9.82□□□□□ -0.84
CALD1-213ENST00000462181 COL9A3Q14050 684 aaPredicted RBP9.82□□□□□ -0.84
CALD1-213ENST00000462181 GRIK5Q16478 980 aa9.82□□□□□ -0.84
CALD1-213ENST00000462181 TRIM11Q96F44 468 aa9.82□□□□□ -0.84
CALD1-213ENST00000462181 TRIM33Q9UPN9 1127 aa9.82□□□□□ -0.84
CALD1-213ENST00000462181 ANKRD33BA6NCL7 494 aa9.81□□□□□ -0.84
CALD1-213ENST00000462181 TRPA1O75762 1119 aa9.81□□□□□ -0.84
CALD1-213ENST00000462181 MAPK8P45983 427 aa9.81□□□□□ -0.84
CALD1-213ENST00000462181 MSL1Q68DK7 614 aa9.81□□□□□ -0.84
CALD1-213ENST00000462181 WFDC8Q8IUA0 241 aa9.81□□□□□ -0.84
CALD1-213ENST00000462181 CACTIN-AS1Q8N1I8 211 aa9.81□□□□□ -0.84
CALD1-213ENST00000462181 SUV39H2Q9H5I1 410 aa9.81□□□□□ -0.84
CALD1-213ENST00000462181 LATS2Q9NRM7 1088 aa9.81□□□□□ -0.84
CALD1-213ENST00000462181 FAM177BA6PVY3 158 aa9.8□□□□□ -0.84
CALD1-213ENST00000462181 TMCO4Q5TGY1 634 aa9.8□□□□□ -0.84
CALD1-213ENST00000462181 PEAR1Q5VY43 1037 aaPredicted RBP9.8□□□□□ -0.84
CALD1-213ENST00000462181 DMRTC2Q8IXT2 367 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms