RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 F6X3S4 739 aa16.83■□□□□ 0.28
C9orf3-210ENST00000462125 RIMBP2O15034 1052 aa16.83■□□□□ 0.28
C9orf3-210ENST00000462125 RAD17O75943 681 aa16.83■□□□□ 0.28
C9orf3-210ENST00000462125 DIEXFQ68CQ4 756 aaKnown RBP16.83■□□□□ 0.28
C9orf3-210ENST00000462125 CNTROBQ8N137 903 aa16.83■□□□□ 0.28
C9orf3-210ENST00000462125 ZC3H12CQ9C0D7 883 aaKnown RBP16.83■□□□□ 0.28
C9orf3-210ENST00000462125 CREBZFQ9NS37 354 aa16.83■□□□□ 0.28
C9orf3-210ENST00000462125 ADAMTSL1Q8N6G6 1762 aa16.82■□□□□ 0.28
C9orf3-210ENST00000462125 GMPSP49915 693 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-210ENST00000462125 MAP1SQ66K74 1059 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-210ENST00000462125 TRMT2AQ8IZ69 625 aaKnown RBP16.82■□□□□ 0.28
C9orf3-210ENST00000462125 ADARB2Q9NS39 739 aaKnown RBP16.82■□□□□ 0.28
C9orf3-210ENST00000462125 ANKIB1Q9P2G1 1089 aa16.82■□□□□ 0.28
C9orf3-210ENST00000462125 GGA1Q9UJY5 639 aa16.82■□□□□ 0.28
C9orf3-210ENST00000462125 LTBP1Q14766 1721 aa16.82■□□□□ 0.28
C9orf3-210ENST00000462125 ATP2B4P23634 1241 aa16.81■□□□□ 0.28
C9orf3-210ENST00000462125 DPF2Q92785 391 aa16.81■□□□□ 0.28
C9orf3-210ENST00000462125 DBNDD1Q9H9R9 158 aa16.81■□□□□ 0.28
C9orf3-210ENST00000462125 PGAP2Q9UHJ9 254 aa16.81■□□□□ 0.28
C9orf3-210ENST00000462125 MINPP1Q9UNW1 487 aa16.81■□□□□ 0.28
C9orf3-210ENST00000462125 XDHP47989 1333 aa16.8■□□□□ 0.28
C9orf3-210ENST00000462125 UFL1O94874 794 aa16.8■□□□□ 0.28
C9orf3-210ENST00000462125 DOK7Q18PE1 504 aa16.8■□□□□ 0.28
C9orf3-210ENST00000462125 MRPL50Q8N5N7 158 aaKnown RBP16.8■□□□□ 0.28
C9orf3-210ENST00000462125 GPR101Q96P66 508 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-210ENST00000462125 PSMD14O00487 310 aa16.79■□□□□ 0.28
C9orf3-210ENST00000462125 ECE2O60344 883 aa16.79■□□□□ 0.28
C9orf3-210ENST00000462125 ALDH1L1O75891 902 aa16.79■□□□□ 0.28
C9orf3-210ENST00000462125 ITGA6P23229 1130 aa16.79■□□□□ 0.28
C9orf3-210ENST00000462125 FOXO4P98177 505 aa16.79■□□□□ 0.28
C9orf3-210ENST00000462125 CDCA7LQ96GN5 454 aa16.79■□□□□ 0.28
C9orf3-210ENST00000462125 BCL2L13Q9BXK5 485 aa16.79■□□□□ 0.28
C9orf3-210ENST00000462125 KCNQ5Q9NR82 932 aa16.79■□□□□ 0.28
C9orf3-210ENST00000462125 CNOT7Q9UIV1 285 aaKnown RBP16.79■□□□□ 0.28
C9orf3-210ENST00000462125 TMEM88BA6NKF7 163 aa16.78■□□□□ 0.28
C9orf3-210ENST00000462125 VIL1P09327 827 aaKnown RBP16.78■□□□□ 0.28
C9orf3-210ENST00000462125 ZC3H15Q8WU90 426 aaKnown RBP16.78■□□□□ 0.28
C9orf3-210ENST00000462125 ZBTB12Q9Y330 459 aaPredicted RBP16.78■□□□□ 0.28
C9orf3-210ENST00000462125 WTIPA6NIX2 430 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-210ENST00000462125 GRM8O00222 908 aa16.77■□□□□ 0.28
C9orf3-210ENST00000462125 RPS12P25398 132 aaKnown RBP16.77■□□□□ 0.28
C9orf3-210ENST00000462125 IGHMBP2P38935 993 aaKnown RBP16.77■□□□□ 0.28
C9orf3-210ENST00000462125 HIRAP54198 1017 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-210ENST00000462125 FAM161AQ3B820 660 aa16.77■□□□□ 0.28
C9orf3-210ENST00000462125 H7C1D1 291 aa16.76■□□□□ 0.27
C9orf3-210ENST00000462125 CCT4P50991 539 aaKnown RBP16.76■□□□□ 0.27
C9orf3-210ENST00000462125 SLC4A10Q6U841 1118 aa16.76■□□□□ 0.27
C9orf3-210ENST00000462125 PODNQ7Z5L7 613 aa16.76■□□□□ 0.27
C9orf3-210ENST00000462125 TNS4Q8IZW8 715 aa16.76■□□□□ 0.27
C9orf3-210ENST00000462125 SSH1Q8WYL5 1049 aa16.76■□□□□ 0.27
C9orf3-210ENST00000462125 SRCIN1Q9C0H9 1055 aa16.76■□□□□ 0.27
C9orf3-210ENST00000462125 LEMD3Q9Y2U8 911 aa16.76■□□□□ 0.27
C9orf3-210ENST00000462125 PTPRCP08575 1304 aa16.75■□□□□ 0.27
C9orf3-210ENST00000462125 MYH3P11055 1940 aa16.75■□□□□ 0.27
C9orf3-210ENST00000462125 ANKRD18BA2A2Z9 1011 aa16.75■□□□□ 0.27
C9orf3-210ENST00000462125 G3V3G9 751 aa16.75■□□□□ 0.27
C9orf3-210ENST00000462125 ALDH1L2Q3SY69 923 aa16.75■□□□□ 0.27
C9orf3-210ENST00000462125 EPHA10Q5JZY3 1008 aa16.75■□□□□ 0.27
C9orf3-210ENST00000462125 DCAF8Q5TAQ9 597 aa16.75■□□□□ 0.27
C9orf3-210ENST00000462125 MICALL2Q8IY33 904 aa16.75■□□□□ 0.27
C9orf3-210ENST00000462125 MPHOSPH8Q99549 860 aa16.75■□□□□ 0.27
C9orf3-210ENST00000462125 ANKRD2Q9GZV1 360 aa16.75■□□□□ 0.27
C9orf3-210ENST00000462125 C9orf78Q9NZ63 289 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-210ENST00000462125 UTYO14607 1347 aa16.74■□□□□ 0.27
C9orf3-210ENST00000462125 SHTN1A0MZ66 631 aa16.74■□□□□ 0.27
C9orf3-210ENST00000462125 CT47B1P0C2W7 299 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-210ENST00000462125 IFIT5Q13325 482 aaKnown RBP16.74■□□□□ 0.27
C9orf3-210ENST00000462125 LMBR1LQ6UX01 489 aa16.74■□□□□ 0.27
C9orf3-210ENST00000462125 MED23Q9ULK4 1368 aa16.74■□□□□ 0.27
C9orf3-210ENST00000462125 TRPM4Q8TD43 1214 aa16.73■□□□□ 0.27
C9orf3-210ENST00000462125 KAZALD1Q96I82 304 aa16.73■□□□□ 0.27
C9orf3-210ENST00000462125 NBPF7P0C2Y1 421 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-210ENST00000462125 FMR1Q06787 632 aaKnown RBP eCLIP16.72■□□□□ 0.27
C9orf3-210ENST00000462125 CHRNDQ07001 517 aa16.72■□□□□ 0.27
C9orf3-210ENST00000462125 CST9Q5W186 159 aa16.72■□□□□ 0.27
C9orf3-210ENST00000462125 RSBN1LQ6PCB5 846 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-210ENST00000462125 SAMD7Q7Z3H4 446 aa16.72■□□□□ 0.27
C9orf3-210ENST00000462125 AGBL3Q8NEM8 1001 aa16.72■□□□□ 0.27
C9orf3-210ENST00000462125 GMLQ99445 158 aa16.72■□□□□ 0.27
C9orf3-210ENST00000462125 COA1Q9GZY4 146 aa16.72■□□□□ 0.27
C9orf3-210ENST00000462125 MKRN1Q9UHC7 482 aaKnown RBP16.72■□□□□ 0.27
C9orf3-210ENST00000462125 CNTNAP1P78357 1384 aa16.72■□□□□ 0.27
C9orf3-210ENST00000462125 ZNF804BA4D1E1 1349 aa16.71■□□□□ 0.27
C9orf3-210ENST00000462125 ZNF609O15014 1411 aa16.71■□□□□ 0.27
C9orf3-210ENST00000462125 RASSF10A6NK89 507 aa16.71■□□□□ 0.27
C9orf3-210ENST00000462125 TRAF5O00463 557 aa16.71■□□□□ 0.27
C9orf3-210ENST00000462125 CCDC57Q2TAC2 916 aa16.71■□□□□ 0.27
C9orf3-210ENST00000462125 CDC37L1Q7L3B6 337 aa16.71■□□□□ 0.27
C9orf3-210ENST00000462125 TXNRD3Q86VQ6 643 aa16.71■□□□□ 0.27
C9orf3-210ENST00000462125 USP17L3A6NCW0 530 aa16.7■□□□□ 0.26
C9orf3-210ENST00000462125 USP17L4A6NCW7 530 aa16.7■□□□□ 0.26
C9orf3-210ENST00000462125 EGFRP00533 1210 aa16.7■□□□□ 0.26
C9orf3-210ENST00000462125 BRPF1P55201 1214 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-210ENST00000462125 ZNF280AP59817 542 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-210ENST00000462125 DEFB115Q30KQ5 88 aa16.7■□□□□ 0.26
C9orf3-210ENST00000462125 C15orf52Q6ZUT6 534 aaKnown RBP16.7■□□□□ 0.26
C9orf3-210ENST00000462125 USP17L1Q7RTZ2 530 aa16.7■□□□□ 0.26
C9orf3-210ENST00000462125 SUCLG2Q96I99 432 aa16.7■□□□□ 0.26
C9orf3-210ENST00000462125 SCN9AQ15858 1988 aa16.69■□□□□ 0.26
C9orf3-210ENST00000462125 VEGFBP49765 207 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 1842.6 ms