RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 TSEN2Q8NCE0 465 aaKnown RBP7.82□□□□□ -1.16
CCT4-203ENST00000461540 CHMP7Q8WUX9 453 aaPredicted RBP7.82□□□□□ -1.16
CCT4-203ENST00000461540 GDPD2Q9HCC8 539 aa7.82□□□□□ -1.16
CCT4-203ENST00000461540 ATG3Q9NT62 314 aa7.82□□□□□ -1.16
CCT4-203ENST00000461540 KIAA1024Q9UPX6 916 aa7.82□□□□□ -1.16
CCT4-203ENST00000461540 BCS1LQ9Y276 419 aa7.82□□□□□ -1.16
CCT4-203ENST00000461540 USP17L5A8MUK1 530 aa7.81□□□□□ -1.16
CCT4-203ENST00000461540 BMP3P12645 472 aa7.81□□□□□ -1.16
CCT4-203ENST00000461540 ARSDP51689 593 aa7.81□□□□□ -1.16
CCT4-203ENST00000461540 LCE5AQ5TCM9 118 aa7.81□□□□□ -1.16
CCT4-203ENST00000461540 ATAD2Q6PL18 1390 aa7.81□□□□□ -1.16
CCT4-203ENST00000461540 KRTAP9-7A8MTY7 169 aa7.8□□□□□ -1.16
CCT4-203ENST00000461540 PSAPP07602 524 aa7.8□□□□□ -1.16
CCT4-203ENST00000461540 PKN1Q16512 942 aa7.8□□□□□ -1.16
CCT4-203ENST00000461540 MSMPQ1L6U9 139 aa7.8□□□□□ -1.16
CCT4-203ENST00000461540 MFSD14AQ96MC6 490 aa7.8□□□□□ -1.16
CCT4-203ENST00000461540 TRIM33Q9UPN9 1127 aa7.8□□□□□ -1.16
CCT4-203ENST00000461540 LINC01387J3KSC0 135 aa7.79□□□□□ -1.16
CCT4-203ENST00000461540 PRNPP04156 253 aa7.79□□□□□ -1.16
CCT4-203ENST00000461540 FOSL1P15407 271 aa7.79□□□□□ -1.16
CCT4-203ENST00000461540 DUOXA2Q1HG44 320 aa7.79□□□□□ -1.16
CCT4-203ENST00000461540 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.79□□□□□ -1.16
CCT4-203ENST00000461540 KIAA1211Q6ZU35 1233 aa7.79□□□□□ -1.16
CCT4-203ENST00000461540 GAS2L2Q8NHY3 880 aa7.79□□□□□ -1.16
CCT4-203ENST00000461540 NSUN5Q96P11 429 aaKnown RBP7.79□□□□□ -1.16
CCT4-203ENST00000461540 AGBL5Q8NDL9 886 aa7.78□□□□□ -1.16
CCT4-203ENST00000461540 SCG3Q8WXD2 468 aaKnown RBP7.78□□□□□ -1.16
CCT4-203ENST00000461540 KCNK4Q9NYG8 393 aa7.78□□□□□ -1.16
CCT4-203ENST00000461540 RBM19Q9Y4C8 960 aaKnown RBP7.78□□□□□ -1.16
CCT4-203ENST00000461540 CLDN10P78369 228 aa7.77□□□□□ -1.17
CCT4-203ENST00000461540 OSBPL1AQ9BXW6 950 aa7.77□□□□□ -1.17
CCT4-203ENST00000461540 HIF3AQ9Y2N7 669 aa7.77□□□□□ -1.17
CCT4-203ENST00000461540 CPSF6Q16630 551 aaKnown RBP eCLIP7.76□□□□□ -1.17
CCT4-203ENST00000461540 NFXL1Q6ZNB6 911 aa7.76□□□□□ -1.17
CCT4-203ENST00000461540 LARGE2Q8N3Y3 721 aa7.76□□□□□ -1.17
CCT4-203ENST00000461540 FARP2O94887 1054 aaPredicted RBP7.75□□□□□ -1.17
CCT4-203ENST00000461540 TXNDC11Q6PKC3 985 aa7.75□□□□□ -1.17
CCT4-203ENST00000461540 FBXL6Q8N531 539 aa7.75□□□□□ -1.17
CCT4-203ENST00000461540 PALM3A6NDB9 673 aaPredicted RBP7.74□□□□□ -1.17
CCT4-203ENST00000461540 COL19A1Q14993 1142 aa7.74□□□□□ -1.17
CCT4-203ENST00000461540 ANKRD34AQ69YU3 496 aa7.74□□□□□ -1.17
CCT4-203ENST00000461540 KLHL23Q8NBE8 558 aa7.74□□□□□ -1.17
CCT4-203ENST00000461540 FLCNQ8NFG4 579 aa7.74□□□□□ -1.17
CCT4-203ENST00000461540 KLK14Q9P0G3 267 aa7.74□□□□□ -1.17
CCT4-203ENST00000461540 XYLBO75191 536 aa7.73□□□□□ -1.17
CCT4-203ENST00000461540 PAPLNO95428 1278 aa7.73□□□□□ -1.17
CCT4-203ENST00000461540 RASA1P20936 1047 aa7.73□□□□□ -1.17
CCT4-203ENST00000461540 SOX18P35713 384 aa7.73□□□□□ -1.17
CCT4-203ENST00000461540 PREPP48147 710 aa7.73□□□□□ -1.17
CCT4-203ENST00000461540 FAM117BQ6P1L5 589 aa7.73□□□□□ -1.17
CCT4-203ENST00000461540 OGFOD1Q8N543 542 aa7.73□□□□□ -1.17
CCT4-203ENST00000461540 CARD10Q9BWT7 1032 aa7.73□□□□□ -1.17
CCT4-203ENST00000461540 BSDC1Q9NW68 430 aaPredicted RBP7.73□□□□□ -1.17
CCT4-203ENST00000461540 MMP20O60882 483 aa7.72□□□□□ -1.17
CCT4-203ENST00000461540 MICAL2O94851 1124 aa7.72□□□□□ -1.17
CCT4-203ENST00000461540 EGFRP00533 1210 aa7.72□□□□□ -1.17
CCT4-203ENST00000461540 F13BP05160 661 aa7.72□□□□□ -1.17
CCT4-203ENST00000461540 ZNF865P0CJ78 1059 aaPredicted RBP7.72□□□□□ -1.17
CCT4-203ENST00000461540 CDC25BP30305 580 aa7.72□□□□□ -1.17
CCT4-203ENST00000461540 KRTAP19-4Q3LI73 84 aa7.72□□□□□ -1.17
CCT4-203ENST00000461540 HOXD8P13378 290 aaPredicted RBP7.71□□□□□ -1.18
CCT4-203ENST00000461540 DGKZQ13574 1117 aa7.71□□□□□ -1.18
CCT4-203ENST00000461540 KSR1Q8IVT5 923 aa7.71□□□□□ -1.18
CCT4-203ENST00000461540 LACRTQ9GZZ8 138 aa7.71□□□□□ -1.18
CCT4-203ENST00000461540 ALG2Q9H553 416 aa7.71□□□□□ -1.18
CCT4-203ENST00000461540 RTCBQ9Y3I0 505 aaKnown RBP7.71□□□□□ -1.18
CCT4-203ENST00000461540 BIN1O00499 593 aa7.7□□□□□ -1.18
CCT4-203ENST00000461540 FSCN2O14926 492 aa7.7□□□□□ -1.18
CCT4-203ENST00000461540 GAS2O43903 313 aaKnown RBP7.7□□□□□ -1.18
CCT4-203ENST00000461540 MAP4P27816 1152 aaKnown RBP7.7□□□□□ -1.18
CCT4-203ENST00000461540 CDC27P30260 824 aa7.7□□□□□ -1.18
CCT4-203ENST00000461540 FDX2Q6P4F2 183 aa7.7□□□□□ -1.18
CCT4-203ENST00000461540 SIX5Q8N196 739 aa7.7□□□□□ -1.18
CCT4-203ENST00000461540 UBASH3BQ8TF42 649 aa7.7□□□□□ -1.18
CCT4-203ENST00000461540 COL26A1Q96A83 441 aa7.7□□□□□ -1.18
CCT4-203ENST00000461540 METTL22Q9BUU2 404 aaPredicted RBP7.7□□□□□ -1.18
CCT4-203ENST00000461540 USP17L3A6NCW0 530 aa7.69□□□□□ -1.18
CCT4-203ENST00000461540 USP17L4A6NCW7 530 aa7.69□□□□□ -1.18
CCT4-203ENST00000461540 TM4SF5O14894 197 aa7.69□□□□□ -1.18
CCT4-203ENST00000461540 DDX3YO15523 660 aaKnown RBP7.69□□□□□ -1.18
CCT4-203ENST00000461540 CYP26A1O43174 497 aa7.69□□□□□ -1.18
CCT4-203ENST00000461540 KRTAP5-3Q6L8H2 238 aa7.69□□□□□ -1.18
CCT4-203ENST00000461540 USP17L2Q6R6M4 530 aa7.69□□□□□ -1.18
CCT4-203ENST00000461540 USP17L1Q7RTZ2 530 aa7.69□□□□□ -1.18
CCT4-203ENST00000461540 PLEKHM2Q8IWE5 1019 aa7.69□□□□□ -1.18
CCT4-203ENST00000461540 FOXD4L4Q8WXT5 416 aaPredicted RBP7.69□□□□□ -1.18
CCT4-203ENST00000461540 ZNF594Q96JF6 807 aaPredicted RBP7.69□□□□□ -1.18
CCT4-203ENST00000461540 RNF208Q9H0X6 261 aa7.69□□□□□ -1.18
CCT4-203ENST00000461540 PAK6Q9NQU5 681 aaPredicted RBP7.69□□□□□ -1.18
CCT4-203ENST00000461540 USP20Q9Y2K6 914 aa7.69□□□□□ -1.18
CCT4-203ENST00000461540 RXRBP28702 533 aa7.68□□□□□ -1.18
CCT4-203ENST00000461540 CEP135Q66GS9 1140 aa7.68□□□□□ -1.18
CCT4-203ENST00000461540 CMTR1Q8N1G2 835 aaKnown RBP7.68□□□□□ -1.18
CCT4-203ENST00000461540 SLC38A3Q99624 504 aa7.68□□□□□ -1.18
CCT4-203ENST00000461540 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.68□□□□□ -1.18
CCT4-203ENST00000461540 NCANO14594 1321 aa7.68□□□□□ -1.18
CCT4-203ENST00000461540 PRRG2O14669 202 aa7.67□□□□□ -1.18
CCT4-203ENST00000461540 SMNDC1O75940 238 aaKnown RBP eCLIP7.67□□□□□ -1.18
CCT4-203ENST00000461540 LILRA6Q6PI73 481 aa7.67□□□□□ -1.18
CCT4-203ENST00000461540 ADAM11O75078 769 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms