RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 CREBZFQ9NS37 354 aa19.84■□□□□ 0.77
NUP50-213ENST00000461437 ECE2O60344 883 aa19.83■□□□□ 0.77
NUP50-213ENST00000461437 UFL1O94874 794 aa19.83■□□□□ 0.77
NUP50-213ENST00000461437 TTLL11Q8NHH1 800 aa19.83■□□□□ 0.77
NUP50-213ENST00000461437 TRPM4Q8TD43 1214 aa19.83■□□□□ 0.77
NUP50-213ENST00000461437 ANKIB1Q9P2G1 1089 aa19.83■□□□□ 0.77
NUP50-213ENST00000461437 PSME4Q14997 1843 aa19.83■□□□□ 0.76
NUP50-213ENST00000461437 H7C1W4 665 aa19.82■□□□□ 0.76
NUP50-213ENST00000461437 TRAF5O00463 557 aa19.82■□□□□ 0.76
NUP50-213ENST00000461437 PSMD14O00487 310 aa19.82■□□□□ 0.76
NUP50-213ENST00000461437 GCKRQ14397 625 aa19.82■□□□□ 0.76
NUP50-213ENST00000461437 ANKRD18AQ8IVF6 992 aa19.82■□□□□ 0.76
NUP50-213ENST00000461437 MYH16Q9H6N6 1097 aa19.82■□□□□ 0.76
NUP50-213ENST00000461437 RTL9Q8NET4 1388 aa19.82■□□□□ 0.76
NUP50-213ENST00000461437 ZNF521Q96K83 1311 aa19.81■□□□□ 0.76
NUP50-213ENST00000461437 HSP90B1P14625 803 aaKnown RBP19.81■□□□□ 0.76
NUP50-213ENST00000461437 CASP7P55210 303 aa19.81■□□□□ 0.76
NUP50-213ENST00000461437 ADARB2Q9NS39 739 aaKnown RBP19.81■□□□□ 0.76
NUP50-213ENST00000461437 A0A1B0GUL6 1792 aa19.8■□□□□ 0.76
NUP50-213ENST00000461437 TMEM88BA6NKF7 163 aa19.8■□□□□ 0.76
NUP50-213ENST00000461437 HIRAP54198 1017 aaPredicted RBP19.8■□□□□ 0.76
NUP50-213ENST00000461437 TNIP1Q15025 636 aa19.8■□□□□ 0.76
NUP50-213ENST00000461437 USP50Q70EL3 339 aaPredicted RBP19.8■□□□□ 0.76
NUP50-213ENST00000461437 EYA3Q99504 573 aa19.8■□□□□ 0.76
NUP50-213ENST00000461437 PODXL2Q9NZ53 605 aa19.8■□□□□ 0.76
NUP50-213ENST00000461437 GGA1Q9UJY5 639 aa19.8■□□□□ 0.76
NUP50-213ENST00000461437 FAM161AQ3B820 660 aa19.79■□□□□ 0.76
NUP50-213ENST00000461437 MICALL2Q8IY33 904 aa19.79■□□□□ 0.76
NUP50-213ENST00000461437 CNOT7Q9UIV1 285 aaKnown RBP19.79■□□□□ 0.76
NUP50-213ENST00000461437 ZNF646O15015 1829 aaPredicted RBP19.79■□□□□ 0.76
NUP50-213ENST00000461437 EGFRP00533 1210 aa19.78■□□□□ 0.76
NUP50-213ENST00000461437 HSPA1AP0DMV8 641 aaKnown RBP19.78■□□□□ 0.76
NUP50-213ENST00000461437 HSPA1BP0DMV9 641 aaKnown RBP19.78■□□□□ 0.76
NUP50-213ENST00000461437 DLK2Q6UY11 383 aa19.78■□□□□ 0.76
NUP50-213ENST00000461437 LINS1Q8NG48 757 aa19.78■□□□□ 0.76
NUP50-213ENST00000461437 CDC5LQ99459 802 aaKnown RBP19.78■□□□□ 0.76
NUP50-213ENST00000461437 GLIS2Q9BZE0 524 aaPredicted RBP19.78■□□□□ 0.76
NUP50-213ENST00000461437 ZC3H12CQ9C0D7 883 aaKnown RBP19.78■□□□□ 0.76
NUP50-213ENST00000461437 CNTNAP1P78357 1384 aa19.78■□□□□ 0.76
NUP50-213ENST00000461437 BEND3Q5T5X7 828 aa19.77■□□□□ 0.76
NUP50-213ENST00000461437 SAMD7Q7Z3H4 446 aa19.77■□□□□ 0.76
NUP50-213ENST00000461437 MINPP1Q9UNW1 487 aa19.77■□□□□ 0.76
NUP50-213ENST00000461437 XDHP47989 1333 aa19.76■□□□□ 0.75
NUP50-213ENST00000461437 ITGA6P23229 1130 aa19.76■□□□□ 0.75
NUP50-213ENST00000461437 VEGFBP49765 207 aa19.76■□□□□ 0.75
NUP50-213ENST00000461437 TBC1D10BQ4KMP7 808 aaPredicted RBP19.76■□□□□ 0.75
NUP50-213ENST00000461437 RBM26Q5T8P6 1007 aaKnown RBP19.76■□□□□ 0.75
NUP50-213ENST00000461437 ABT1Q9ULW3 272 aaKnown RBP19.76■□□□□ 0.75
NUP50-213ENST00000461437 G3V3G9 751 aa19.75■□□□□ 0.75
NUP50-213ENST00000461437 DCAF8Q5TAQ9 597 aa19.75■□□□□ 0.75
NUP50-213ENST00000461437 SLC4A10Q6U841 1118 aa19.75■□□□□ 0.75
NUP50-213ENST00000461437 TNS4Q8IZW8 715 aa19.75■□□□□ 0.75
NUP50-213ENST00000461437 CDCA7LQ96GN5 454 aa19.75■□□□□ 0.75
NUP50-213ENST00000461437 PLA2G12BQ9BX93 195 aa19.75■□□□□ 0.75
NUP50-213ENST00000461437 CAPN15O75808 1086 aa19.74■□□□□ 0.75
NUP50-213ENST00000461437 ATP2B4P23634 1241 aa19.74■□□□□ 0.75
NUP50-213ENST00000461437 EPHA10Q5JZY3 1008 aa19.74■□□□□ 0.75
NUP50-213ENST00000461437 BSDC1Q9NW68 430 aaPredicted RBP19.74■□□□□ 0.75
NUP50-213ENST00000461437 H7C1D1 291 aa19.73■□□□□ 0.75
NUP50-213ENST00000461437 KLRK1P26718 216 aa19.73■□□□□ 0.75
NUP50-213ENST00000461437 IGHMBP2P38935 993 aaKnown RBP19.73■□□□□ 0.75
NUP50-213ENST00000461437 FOXO4P98177 505 aa19.73■□□□□ 0.75
NUP50-213ENST00000461437 CST9Q5W186 159 aa19.73■□□□□ 0.75
NUP50-213ENST00000461437 TXNRD3Q86VQ6 643 aa19.73■□□□□ 0.75
NUP50-213ENST00000461437 CHMP3Q9Y3E7 222 aa19.73■□□□□ 0.75
NUP50-213ENST00000461437 SNAP23O00161 211 aa19.72■□□□□ 0.75
NUP50-213ENST00000461437 CSF1RP07333 972 aa19.72■□□□□ 0.75
NUP50-213ENST00000461437 CCT4P50991 539 aaKnown RBP19.72■□□□□ 0.75
NUP50-213ENST00000461437 GRM1Q13255 1194 aa19.72■□□□□ 0.75
NUP50-213ENST00000461437 MXD3Q9BW11 206 aa19.72■□□□□ 0.75
NUP50-213ENST00000461437 ZNF408Q9H9D4 720 aa19.72■□□□□ 0.75
NUP50-213ENST00000461437 ASTN2O75129 1339 aaPredicted RBP19.72■□□□□ 0.75
NUP50-213ENST00000461437 DEFB115Q30KQ5 88 aa19.71■□□□□ 0.75
NUP50-213ENST00000461437 MRPL50Q8N5N7 158 aaKnown RBP19.71■□□□□ 0.75
NUP50-213ENST00000461437 DPF2Q92785 391 aa19.71■□□□□ 0.75
NUP50-213ENST00000461437 VIL1P09327 827 aaKnown RBP19.7■□□□□ 0.74
NUP50-213ENST00000461437 PAXIP1Q6ZW49 1069 aaPredicted RBP19.7■□□□□ 0.74
NUP50-213ENST00000461437 USP48Q86UV5 1035 aa19.7■□□□□ 0.74
NUP50-213ENST00000461437 HELBQ8NG08 1087 aaPredicted RBP19.7■□□□□ 0.74
NUP50-213ENST00000461437 ZNF594Q96JF6 807 aaPredicted RBP19.7■□□□□ 0.74
NUP50-213ENST00000461437 MED23Q9ULK4 1368 aa19.7■□□□□ 0.74
NUP50-213ENST00000461437 RASSF10A6NK89 507 aa19.69■□□□□ 0.74
NUP50-213ENST00000461437 GRM8O00222 908 aa19.69■□□□□ 0.74
NUP50-213ENST00000461437 CELF2O95319 508 aaKnown RBP19.69■□□□□ 0.74
NUP50-213ENST00000461437 SLFN5Q08AF3 891 aa19.69■□□□□ 0.74
NUP50-213ENST00000461437 LMBR1LQ6UX01 489 aa19.69■□□□□ 0.74
NUP50-213ENST00000461437 FBXW7Q969H0 707 aa19.69■□□□□ 0.74
NUP50-213ENST00000461437 MPHOSPH8Q99549 860 aa19.69■□□□□ 0.74
NUP50-213ENST00000461437 PGAP2Q9UHJ9 254 aa19.69■□□□□ 0.74
NUP50-213ENST00000461437 ANKRD18BA2A2Z9 1011 aa19.68■□□□□ 0.74
NUP50-213ENST00000461437 ADM5C9JUS6 153 aa19.68■□□□□ 0.74
NUP50-213ENST00000461437 E9PSI1 815 aa19.68■□□□□ 0.74
NUP50-213ENST00000461437 TAF5LO75529 589 aa19.68■□□□□ 0.74
NUP50-213ENST00000461437 CHRNDQ07001 517 aa19.68■□□□□ 0.74
NUP50-213ENST00000461437 KIF4BQ2VIQ3 1234 aa19.68■□□□□ 0.74
NUP50-213ENST00000461437 CYP4F22Q6NT55 531 aa19.68■□□□□ 0.74
NUP50-213ENST00000461437 RSBN1LQ6PCB5 846 aaPredicted RBP19.68■□□□□ 0.74
NUP50-213ENST00000461437 SSH1Q8WYL5 1049 aa19.68■□□□□ 0.74
NUP50-213ENST00000461437 FOXN1O15353 648 aa19.67■□□□□ 0.74
NUP50-213ENST00000461437 RPS12P25398 132 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms