RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 POLLQ9UGP5 575 aa16.77■□□□□ 0.28
C9orf78-202ENST00000461349 FKTNO75072 461 aa16.76■□□□□ 0.27
C9orf78-202ENST00000461349 VIL1P09327 827 aaKnown RBP16.76■□□□□ 0.27
C9orf78-202ENST00000461349 SCARF1Q14162 830 aa16.76■□□□□ 0.27
C9orf78-202ENST00000461349 ZC3H12CQ9C0D7 883 aaKnown RBP16.76■□□□□ 0.27
C9orf78-202ENST00000461349 TM4SF4P48230 202 aa16.75■□□□□ 0.27
C9orf78-202ENST00000461349 GPSM2P81274 684 aa16.75■□□□□ 0.27
C9orf78-202ENST00000461349 SREBF2Q12772 1141 aa16.75■□□□□ 0.27
C9orf78-202ENST00000461349 AIMP1Q12904 312 aaKnown RBP16.75■□□□□ 0.27
C9orf78-202ENST00000461349 TCIRG1Q13488 830 aa16.75■□□□□ 0.27
C9orf78-202ENST00000461349 TTLL12Q14166 644 aaPredicted RBP16.75■□□□□ 0.27
C9orf78-202ENST00000461349 PDIA6Q15084 440 aa16.75■□□□□ 0.27
C9orf78-202ENST00000461349 LRP10Q7Z4F1 713 aa16.75■□□□□ 0.27
C9orf78-202ENST00000461349 CELF1Q92879 486 aaKnown RBP16.75■□□□□ 0.27
C9orf78-202ENST00000461349 PITPNM2Q9BZ72 1349 aa16.74■□□□□ 0.27
C9orf78-202ENST00000461349 ANXA1P04083 346 aa16.74■□□□□ 0.27
C9orf78-202ENST00000461349 PPP2R1AP30153 589 aa16.74■□□□□ 0.27
C9orf78-202ENST00000461349 INTS3Q68E01 1043 aaKnown RBP16.74■□□□□ 0.27
C9orf78-202ENST00000461349 COPS6Q7L5N1 327 aa16.74■□□□□ 0.27
C9orf78-202ENST00000461349 AGBL3Q8NEM8 1001 aa16.74■□□□□ 0.27
C9orf78-202ENST00000461349 TBC1D16Q8TBP0 767 aa16.74■□□□□ 0.27
C9orf78-202ENST00000461349 TSPYL4Q9UJ04 414 aa16.74■□□□□ 0.27
C9orf78-202ENST00000461349 ZNF609O15014 1411 aa16.73■□□□□ 0.27
C9orf78-202ENST00000461349 UBE2Q2LH0YL09 131 aa16.73■□□□□ 0.27
C9orf78-202ENST00000461349 ZNF280AP59817 542 aaPredicted RBP16.73■□□□□ 0.27
C9orf78-202ENST00000461349 PROSER3Q2NL68 480 aa16.73■□□□□ 0.27
C9orf78-202ENST00000461349 MOB2Q70IA6 237 aa16.73■□□□□ 0.27
C9orf78-202ENST00000461349 NF2P35240 595 aa16.72■□□□□ 0.27
C9orf78-202ENST00000461349 NFE2L2Q16236 605 aa16.72■□□□□ 0.27
C9orf78-202ENST00000461349 RSBN1LQ6PCB5 846 aaPredicted RBP16.72■□□□□ 0.27
C9orf78-202ENST00000461349 XAGE3Q8WTP9 111 aa16.72■□□□□ 0.27
C9orf78-202ENST00000461349 NECTIN2Q92692 538 aa16.72■□□□□ 0.27
C9orf78-202ENST00000461349 MYOZ2Q9NPC6 264 aa16.72■□□□□ 0.27
C9orf78-202ENST00000461349 USP17L8P0C7I0 530 aa16.71■□□□□ 0.27
C9orf78-202ENST00000461349 MKRN3Q13064 507 aaKnown RBP16.71■□□□□ 0.27
C9orf78-202ENST00000461349 SF3B3Q15393 1217 aaKnown RBP16.71■□□□□ 0.27
C9orf78-202ENST00000461349 CFHR5Q9BXR6 569 aa16.71■□□□□ 0.27
C9orf78-202ENST00000461349 COL4A1P02462 1669 aa16.7■□□□□ 0.26
C9orf78-202ENST00000461349 FXR1P51114 621 aaKnown RBP eCLIP16.7■□□□□ 0.26
C9orf78-202ENST00000461349 ZNF428Q96B54 188 aa16.7■□□□□ 0.26
C9orf78-202ENST00000461349 ANKIB1Q9P2G1 1089 aa16.7■□□□□ 0.26
C9orf78-202ENST00000461349 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
C9orf78-202ENST00000461349 MKI67P46013 3256 aaKnown RBP16.69■□□□□ 0.26
C9orf78-202ENST00000461349 UFL1O94874 794 aa16.69■□□□□ 0.26
C9orf78-202ENST00000461349 ALDH1A1P00352 501 aa16.69■□□□□ 0.26
C9orf78-202ENST00000461349 RPS8P62241 208 aaKnown RBP16.69■□□□□ 0.26
C9orf78-202ENST00000461349 FAM89AQ96GI7 184 aa16.69■□□□□ 0.26
C9orf78-202ENST00000461349 PODXL2Q9NZ53 605 aa16.69■□□□□ 0.26
C9orf78-202ENST00000461349 TRIM17Q9Y577 477 aa16.69■□□□□ 0.26
C9orf78-202ENST00000461349 POTEFA5A3E0 1075 aa16.68■□□□□ 0.26
C9orf78-202ENST00000461349 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
C9orf78-202ENST00000461349 GGA1Q9UJY5 639 aa16.68■□□□□ 0.26
C9orf78-202ENST00000461349 SCAF8Q9UPN6 1271 aaKnown RBP16.68■□□□□ 0.26
C9orf78-202ENST00000461349 LAMB1P07942 1786 aa16.68■□□□□ 0.26
C9orf78-202ENST00000461349 PRAMEF18Q5VWM3 479 aa16.67■□□□□ 0.26
C9orf78-202ENST00000461349 KIAA0100Q14667 2235 aaKnown RBP16.66■□□□□ 0.26
C9orf78-202ENST00000461349 RTL5Q5HYW3 569 aaPredicted RBP16.66■□□□□ 0.26
C9orf78-202ENST00000461349 ARMC9Q7Z3E5 817 aa16.66■□□□□ 0.26
C9orf78-202ENST00000461349 PLEKHF1Q96S99 279 aa16.66■□□□□ 0.26
C9orf78-202ENST00000461349 CENPFP49454 3210 aa16.65■□□□□ 0.26
C9orf78-202ENST00000461349 USP17L3A6NCW0 530 aa16.65■□□□□ 0.26
C9orf78-202ENST00000461349 USP17L4A6NCW7 530 aa16.65■□□□□ 0.26
C9orf78-202ENST00000461349 OTOP1Q7RTM1 612 aa16.65■□□□□ 0.26
C9orf78-202ENST00000461349 USP17L1Q7RTZ2 530 aa16.65■□□□□ 0.26
C9orf78-202ENST00000461349 OGFOD1Q8N543 542 aa16.65■□□□□ 0.26
C9orf78-202ENST00000461349 PLBD2Q8NHP8 589 aa16.65■□□□□ 0.26
C9orf78-202ENST00000461349 GMLQ99445 158 aa16.65■□□□□ 0.26
C9orf78-202ENST00000461349 R3HDMLQ9H3Y0 253 aa16.65■□□□□ 0.26
C9orf78-202ENST00000461349 BABAM1Q9NWV8 329 aa16.65■□□□□ 0.26
C9orf78-202ENST00000461349 IRS4O14654 1257 aaPredicted RBP16.64■□□□□ 0.25
C9orf78-202ENST00000461349 HSP90B1P14625 803 aaKnown RBP16.64■□□□□ 0.25
C9orf78-202ENST00000461349 INHBEP58166 350 aa16.64■□□□□ 0.25
C9orf78-202ENST00000461349 NBPF9Q3BBW0 867 aa16.64■□□□□ 0.25
C9orf78-202ENST00000461349 PODNQ7Z5L7 613 aa16.64■□□□□ 0.25
C9orf78-202ENST00000461349 ZNF646O15015 1829 aaPredicted RBP16.63■□□□□ 0.25
C9orf78-202ENST00000461349 SPEF2Q9C093 1822 aa16.63■□□□□ 0.25
C9orf78-202ENST00000461349 HTTP42858 3142 aa16.63■□□□□ 0.25
C9orf78-202ENST00000461349 MANSC4A6NHS7 340 aaPredicted RBP16.63■□□□□ 0.25
C9orf78-202ENST00000461349 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
C9orf78-202ENST00000461349 PTPN12Q05209 780 aaKnown RBP16.63■□□□□ 0.25
C9orf78-202ENST00000461349 PRKG1Q13976 671 aa16.63■□□□□ 0.25
C9orf78-202ENST00000461349 SPRYD7Q5W111 196 aa16.63■□□□□ 0.25
C9orf78-202ENST00000461349 ANKRD13DQ6ZTN6 518 aa16.63■□□□□ 0.25
C9orf78-202ENST00000461349 CCER1Q8TC90 406 aaPredicted RBP16.63■□□□□ 0.25
C9orf78-202ENST00000461349 ERO1AQ96HE7 468 aa16.63■□□□□ 0.25
C9orf78-202ENST00000461349 ISCA1Q9BUE6 129 aa16.63■□□□□ 0.25
C9orf78-202ENST00000461349 PTPN22Q9Y2R2 807 aa16.62■□□□□ 0.25
C9orf78-202ENST00000461349 XDHP47989 1333 aa16.62■□□□□ 0.25
C9orf78-202ENST00000461349 ECM29Q5VYK3 1845 aa16.61■□□□□ 0.25
C9orf78-202ENST00000461349 IFNL1Q8IU54 200 aa16.61■□□□□ 0.25
C9orf78-202ENST00000461349 TMEM106CQ9BVX2 250 aa16.61■□□□□ 0.25
C9orf78-202ENST00000461349 SEC31BQ9NQW1 1179 aa16.61■□□□□ 0.25
C9orf78-202ENST00000461349 CHPF2Q9P2E5 772 aa16.61■□□□□ 0.25
C9orf78-202ENST00000461349 ANGEL1Q9UNK9 670 aaKnown RBP16.61■□□□□ 0.25
C9orf78-202ENST00000461349 COLQQ9Y215 455 aaPredicted RBP16.61■□□□□ 0.25
C9orf78-202ENST00000461349 MYO3BQ8WXR4 1341 aa16.61■□□□□ 0.25
C9orf78-202ENST00000461349 BRCA2P51587 3418 aa16.6■□□□□ 0.25
C9orf78-202ENST00000461349 WNT10BO00744 389 aa16.6■□□□□ 0.25
C9orf78-202ENST00000461349 EN2P19622 333 aaPredicted RBP16.6■□□□□ 0.25
C9orf78-202ENST00000461349 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms