RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 SMTNP53814 917 aa11.28□□□□□ -0.6
ECHDC1-212ENST00000461239 ARHGAP4P98171 946 aa11.28□□□□□ -0.6
ECHDC1-212ENST00000461239 NAA30Q147X3 362 aaPredicted RBP11.28□□□□□ -0.6
ECHDC1-212ENST00000461239 Q6ZNB5 142 aa11.28□□□□□ -0.6
ECHDC1-212ENST00000461239 SLC9A9Q8IVB4 645 aa11.28□□□□□ -0.6
ECHDC1-212ENST00000461239 FMN2Q9NZ56 1722 aa11.28□□□□□ -0.6
ECHDC1-212ENST00000461239 USP32Q8NFA0 1604 aa11.27□□□□□ -0.6
ECHDC1-212ENST00000461239 RBM47A0AV96 593 aaKnown RBP11.27□□□□□ -0.61
ECHDC1-212ENST00000461239 TBCELQ5QJ74 424 aa11.27□□□□□ -0.61
ECHDC1-212ENST00000461239 STAG2Q8N3U4 1231 aa11.27□□□□□ -0.61
ECHDC1-212ENST00000461239 KLF16Q9BXK1 252 aaPredicted RBP11.27□□□□□ -0.61
ECHDC1-212ENST00000461239 PPP1R12BO60237 982 aaPredicted RBP11.26□□□□□ -0.61
ECHDC1-212ENST00000461239 CBLBQ13191 982 aa11.26□□□□□ -0.61
ECHDC1-212ENST00000461239 C2orf49Q9BVC5 232 aaPredicted RBP11.26□□□□□ -0.61
ECHDC1-212ENST00000461239 CDK19Q9BWU1 502 aa11.26□□□□□ -0.61
ECHDC1-212ENST00000461239 IQSEC3Q9UPP2 1182 aaPredicted RBP11.26□□□□□ -0.61
ECHDC1-212ENST00000461239 USP3Q9Y6I4 520 aa11.26□□□□□ -0.61
ECHDC1-212ENST00000461239 TULP4Q9NRJ4 1543 aa11.25□□□□□ -0.61
ECHDC1-212ENST00000461239 AHDC1Q5TGY3 1603 aaPredicted RBP11.25□□□□□ -0.61
ECHDC1-212ENST00000461239 NPR3P17342 541 aa11.25□□□□□ -0.61
ECHDC1-212ENST00000461239 FOXC1Q12948 553 aa11.25□□□□□ -0.61
ECHDC1-212ENST00000461239 Q6ZVU0 165 aa11.25□□□□□ -0.61
ECHDC1-212ENST00000461239 SNIP1Q8TAD8 396 aaKnown RBP11.25□□□□□ -0.61
ECHDC1-212ENST00000461239 CNKSR1Q969H4 720 aa11.25□□□□□ -0.61
ECHDC1-212ENST00000461239 TESK2Q96S53 571 aa11.25□□□□□ -0.61
ECHDC1-212ENST00000461239 ESYT1Q9BSJ8 1104 aa11.25□□□□□ -0.61
ECHDC1-212ENST00000461239 WASF2Q9Y6W5 498 aa11.25□□□□□ -0.61
ECHDC1-212ENST00000461239 RGPD8O14715 1765 aaPredicted RBP11.25□□□□□ -0.61
ECHDC1-212ENST00000461239 QRICH2Q9H0J4 1663 aa11.24□□□□□ -0.61
ECHDC1-212ENST00000461239 ST20-MTHFSA0A0A6YYL1 179 aa11.24□□□□□ -0.61
ECHDC1-212ENST00000461239 CLN3Q13286 438 aa11.24□□□□□ -0.61
ECHDC1-212ENST00000461239 TLR1Q15399 786 aa11.24□□□□□ -0.61
ECHDC1-212ENST00000461239 POTEAQ6S8J7 498 aa11.24□□□□□ -0.61
ECHDC1-212ENST00000461239 NPAS4Q8IUM7 802 aa11.24□□□□□ -0.61
ECHDC1-212ENST00000461239 ITPKCQ96DU7 683 aa11.24□□□□□ -0.61
ECHDC1-212ENST00000461239 SAP130Q9H0E3 1048 aa11.24□□□□□ -0.61
ECHDC1-212ENST00000461239 ANKARQ7Z5J8 1434 aa11.24□□□□□ -0.61
ECHDC1-212ENST00000461239 ATP7BP35670 1465 aa11.24□□□□□ -0.61
ECHDC1-212ENST00000461239 COL16A1Q07092 1604 aaPredicted RBP11.24□□□□□ -0.61
ECHDC1-212ENST00000461239 NHSL1Q5SYE7 1610 aa11.24□□□□□ -0.61
ECHDC1-212ENST00000461239 ANKRD33BA6NCL7 494 aa11.23□□□□□ -0.61
ECHDC1-212ENST00000461239 UNCXA6NJT0 531 aa11.23□□□□□ -0.61
ECHDC1-212ENST00000461239 PSMA6P60900 246 aaKnown RBP11.23□□□□□ -0.61
ECHDC1-212ENST00000461239 VTI1AQ96AJ9 217 aa11.23□□□□□ -0.61
ECHDC1-212ENST00000461239 NUDT16Q96DE0 195 aaKnown RBP11.23□□□□□ -0.61
ECHDC1-212ENST00000461239 FHDC1Q9C0D6 1143 aaPredicted RBP11.23□□□□□ -0.61
ECHDC1-212ENST00000461239 E9PSI1 815 aa11.22□□□□□ -0.61
ECHDC1-212ENST00000461239 CDK2AP1O14519 115 aa11.22□□□□□ -0.61
ECHDC1-212ENST00000461239 SOS2Q07890 1332 aaPredicted RBP11.22□□□□□ -0.61
ECHDC1-212ENST00000461239 EIF3AQ14152 1382 aaKnown RBP11.22□□□□□ -0.61
ECHDC1-212ENST00000461239 C16orf46Q6P387 395 aa11.22□□□□□ -0.61
ECHDC1-212ENST00000461239 ZNF295-AS1Q8N0V1 137 aa11.22□□□□□ -0.61
ECHDC1-212ENST00000461239 USP47Q96K76 1375 aa11.22□□□□□ -0.61
ECHDC1-212ENST00000461239 DCTN4Q9UJW0 460 aa11.22□□□□□ -0.61
ECHDC1-212ENST00000461239 SBNO2Q9Y2G9 1366 aa11.22□□□□□ -0.61
ECHDC1-212ENST00000461239 PHLPP1O60346 1717 aa11.21□□□□□ -0.61
ECHDC1-212ENST00000461239 PXDNQ92626 1479 aa11.21□□□□□ -0.61
ECHDC1-212ENST00000461239 GDF9O60383 454 aa11.21□□□□□ -0.61
ECHDC1-212ENST00000461239 ZIC2O95409 532 aaPredicted RBP11.21□□□□□ -0.61
ECHDC1-212ENST00000461239 PTGIRP43119 386 aa11.21□□□□□ -0.61
ECHDC1-212ENST00000461239 XPCQ01831 940 aaPredicted RBP11.21□□□□□ -0.61
ECHDC1-212ENST00000461239 PMFBP1Q8TBY8 1022 aa11.21□□□□□ -0.61
ECHDC1-212ENST00000461239 PRKD2Q9BZL6 878 aa11.21□□□□□ -0.61
ECHDC1-212ENST00000461239 ZFAND3Q9H8U3 227 aa11.21□□□□□ -0.61
ECHDC1-212ENST00000461239 V9GY48 417 aaPredicted RBP11.21□□□□□ -0.61
ECHDC1-212ENST00000461239 J3QL48 77 aa11.2□□□□□ -0.62
ECHDC1-212ENST00000461239 MAPK1P28482 360 aa11.2□□□□□ -0.62
ECHDC1-212ENST00000461239 ASB16Q96NS5 453 aa11.2□□□□□ -0.62
ECHDC1-212ENST00000461239 QTRT2Q9H974 415 aaKnown RBP11.2□□□□□ -0.62
ECHDC1-212ENST00000461239 TNFRSF10BO14763 440 aa11.19□□□□□ -0.62
ECHDC1-212ENST00000461239 FAM13AO94988 1023 aa11.19□□□□□ -0.62
ECHDC1-212ENST00000461239 TIMP2P16035 220 aa11.19□□□□□ -0.62
ECHDC1-212ENST00000461239 MPSTP25325 297 aa11.19□□□□□ -0.62
ECHDC1-212ENST00000461239 WDR4P57081 412 aaKnown RBP11.19□□□□□ -0.62
ECHDC1-212ENST00000461239 COX20Q5RI15 118 aa11.19□□□□□ -0.62
ECHDC1-212ENST00000461239 AGBL1Q96MI9 1066 aa11.19□□□□□ -0.62
ECHDC1-212ENST00000461239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.19□□□□□ -0.62
ECHDC1-212ENST00000461239 TOPAZ1Q8N9V7 1692 aa11.19□□□□□ -0.62
ECHDC1-212ENST00000461239 NPHP3Q7Z494 1330 aa11.18□□□□□ -0.62
ECHDC1-212ENST00000461239 EVC2Q86UK5 1308 aa11.18□□□□□ -0.62
ECHDC1-212ENST00000461239 EML1O00423 815 aa11.18□□□□□ -0.62
ECHDC1-212ENST00000461239 CENPCQ03188 943 aa11.18□□□□□ -0.62
ECHDC1-212ENST00000461239 SH3PXD2AQ5TCZ1 1133 aa11.18□□□□□ -0.62
ECHDC1-212ENST00000461239 NBPF15Q8N660 670 aa11.18□□□□□ -0.62
ECHDC1-212ENST00000461239 ZDHHC1Q8WTX9 485 aa11.18□□□□□ -0.62
ECHDC1-212ENST00000461239 MYO19Q96H55 970 aa11.18□□□□□ -0.62
ECHDC1-212ENST00000461239 TOR4AQ9NXH8 423 aa11.18□□□□□ -0.62
ECHDC1-212ENST00000461239 KIF1AQ12756 1690 aa11.17□□□□□ -0.62
ECHDC1-212ENST00000461239 DISP3Q9P2K9 1392 aa11.17□□□□□ -0.62
ECHDC1-212ENST00000461239 HSPA5P11021 654 aaKnown RBP11.17□□□□□ -0.62
ECHDC1-212ENST00000461239 ZNF16P17020 682 aaPredicted RBP11.17□□□□□ -0.62
ECHDC1-212ENST00000461239 HIRAP54198 1017 aaPredicted RBP11.17□□□□□ -0.62
ECHDC1-212ENST00000461239 TEAD4Q15561 434 aa11.17□□□□□ -0.62
ECHDC1-212ENST00000461239 KRT28Q7Z3Y7 464 aa11.17□□□□□ -0.62
ECHDC1-212ENST00000461239 BCL2L13Q9BXK5 485 aa11.17□□□□□ -0.62
ECHDC1-212ENST00000461239 CABP1Q9NZU7 370 aa11.17□□□□□ -0.62
ECHDC1-212ENST00000461239 LRFN2Q9ULH4 789 aa11.17□□□□□ -0.62
ECHDC1-212ENST00000461239 POLR3AO14802 1390 aaPredicted RBP11.16□□□□□ -0.62
ECHDC1-212ENST00000461239 JCADQ9P266 1359 aa11.16□□□□□ -0.62
ECHDC1-212ENST00000461239 ACEP12821 1306 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms