RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 CCDC85CA6NKD9 419 aa17.97■□□□□ 0.47
COL5A3-202ENST00000461214 RPAP2Q8IXW5 612 aaPredicted RBP17.97■□□□□ 0.47
COL5A3-202ENST00000461214 TTLL11Q8NHH1 800 aa17.97■□□□□ 0.47
COL5A3-202ENST00000461214 NFKBIEO00221 500 aa17.96■□□□□ 0.47
COL5A3-202ENST00000461214 EPHA10Q5JZY3 1008 aa17.96■□□□□ 0.47
COL5A3-202ENST00000461214 CEP85Q6P2H3 762 aa17.96■□□□□ 0.47
COL5A3-202ENST00000461214 TTLL6Q8N841 843 aa17.96■□□□□ 0.47
COL5A3-202ENST00000461214 C1orf115Q9H7X2 142 aa17.96■□□□□ 0.47
COL5A3-202ENST00000461214 LMBR1LQ6UX01 489 aa17.95■□□□□ 0.46
COL5A3-202ENST00000461214 C2CD5Q86YS7 1000 aa17.95■□□□□ 0.46
COL5A3-202ENST00000461214 CCDC24Q8N4L8 307 aa17.95■□□□□ 0.46
COL5A3-202ENST00000461214 RPGRQ92834 1020 aaKnown RBP17.95■□□□□ 0.46
COL5A3-202ENST00000461214 HMMRO75330 724 aa17.94■□□□□ 0.46
COL5A3-202ENST00000461214 C3orf67Q6ZVT6 689 aa17.94■□□□□ 0.46
COL5A3-202ENST00000461214 SRGAP3O43295 1099 aa17.93■□□□□ 0.46
COL5A3-202ENST00000461214 SRGNP10124 158 aa17.93■□□□□ 0.46
COL5A3-202ENST00000461214 NPR1P16066 1061 aa17.93■□□□□ 0.46
COL5A3-202ENST00000461214 HOXA10P31260 410 aaPredicted RBP17.93■□□□□ 0.46
COL5A3-202ENST00000461214 ATP8B2P98198 1209 aa17.93■□□□□ 0.46
COL5A3-202ENST00000461214 IFIT5Q13325 482 aaKnown RBP17.93■□□□□ 0.46
COL5A3-202ENST00000461214 SSH3Q8TE77 659 aa17.93■□□□□ 0.46
COL5A3-202ENST00000461214 CDC5LQ99459 802 aaKnown RBP17.93■□□□□ 0.46
COL5A3-202ENST00000461214 GREM2Q9H772 168 aa17.93■□□□□ 0.46
COL5A3-202ENST00000461214 WBP1LQ9NX94 342 aa17.93■□□□□ 0.46
COL5A3-202ENST00000461214 DICER1Q9UPY3 1922 aaKnown RBP17.92■□□□□ 0.46
COL5A3-202ENST00000461214 ANKRD18BA2A2Z9 1011 aa17.92■□□□□ 0.46
COL5A3-202ENST00000461214 H0YIN7 160 aa17.92■□□□□ 0.46
COL5A3-202ENST00000461214 DDNO94850 711 aaPredicted RBP17.92■□□□□ 0.46
COL5A3-202ENST00000461214 HSPA8P11142 646 aaKnown RBP17.92■□□□□ 0.46
COL5A3-202ENST00000461214 ITGA6P23229 1130 aa17.92■□□□□ 0.46
COL5A3-202ENST00000461214 POLA2Q14181 598 aa17.92■□□□□ 0.46
COL5A3-202ENST00000461214 CCDC57Q2TAC2 916 aa17.92■□□□□ 0.46
COL5A3-202ENST00000461214 STYK1Q6J9G0 422 aa17.92■□□□□ 0.46
COL5A3-202ENST00000461214 MASTLQ96GX5 879 aa17.92■□□□□ 0.46
COL5A3-202ENST00000461214 RBM17Q96I25 401 aaKnown RBP17.92■□□□□ 0.46
COL5A3-202ENST00000461214 CRAMP1Q96RY5 1269 aa17.92■□□□□ 0.46
COL5A3-202ENST00000461214 CHMP3Q9Y3E7 222 aa17.92■□□□□ 0.46
COL5A3-202ENST00000461214 DDX46Q7L014 1031 aaKnown RBP17.91■□□□□ 0.46
COL5A3-202ENST00000461214 PSME4Q14997 1843 aa17.91■□□□□ 0.46
COL5A3-202ENST00000461214 PNMA6EA0A0J9YXQ4 647 aa17.9■□□□□ 0.46
COL5A3-202ENST00000461214 TMEM88BA6NKF7 163 aa17.9■□□□□ 0.46
COL5A3-202ENST00000461214 HDAC1Q13547 482 aaPredicted RBP17.9■□□□□ 0.46
COL5A3-202ENST00000461214 TMC4Q7Z404 712 aa17.9■□□□□ 0.46
COL5A3-202ENST00000461214 ZNF622Q969S3 477 aaKnown RBP eCLIP17.9■□□□□ 0.46
COL5A3-202ENST00000461214 FBXO3Q9UK99 471 aa17.9■□□□□ 0.46
COL5A3-202ENST00000461214 PCDHB15Q9Y5E8 787 aa17.9■□□□□ 0.46
COL5A3-202ENST00000461214 C21orf2O43822 256 aa17.89■□□□□ 0.45
COL5A3-202ENST00000461214 ALDH1B1P30837 517 aa17.89■□□□□ 0.45
COL5A3-202ENST00000461214 RFX5P48382 616 aaPredicted RBP17.89■□□□□ 0.45
COL5A3-202ENST00000461214 GRAPQ13588 217 aa17.89■□□□□ 0.45
COL5A3-202ENST00000461214 GRAPLQ8TC17 118 aaPredicted RBP17.89■□□□□ 0.45
COL5A3-202ENST00000461214 COPRSQ9NQ92 184 aa17.89■□□□□ 0.45
COL5A3-202ENST00000461214 PASKQ96RG2 1323 aa17.89■□□□□ 0.45
COL5A3-202ENST00000461214 AK9Q5TCS8 1911 aa17.88■□□□□ 0.45
COL5A3-202ENST00000461214 DUOX1Q9NRD9 1551 aa17.88■□□□□ 0.45
COL5A3-202ENST00000461214 TAF7LQ5H9L4 462 aa17.88■□□□□ 0.45
COL5A3-202ENST00000461214 ANKRD18AQ8IVF6 992 aa17.88■□□□□ 0.45
COL5A3-202ENST00000461214 SIRT2Q8IXJ6 389 aa17.88■□□□□ 0.45
COL5A3-202ENST00000461214 CNKSR1Q969H4 720 aa17.88■□□□□ 0.45
COL5A3-202ENST00000461214 CCDC85AQ96PX6 553 aaPredicted RBP17.88■□□□□ 0.45
COL5A3-202ENST00000461214 IGHMBP2P38935 993 aaKnown RBP17.87■□□□□ 0.45
COL5A3-202ENST00000461214 PTPN12Q05209 780 aaKnown RBP17.87■□□□□ 0.45
COL5A3-202ENST00000461214 EAPPQ56P03 285 aaPredicted RBP17.87■□□□□ 0.45
COL5A3-202ENST00000461214 LDHDQ86WU2 507 aa17.87■□□□□ 0.45
COL5A3-202ENST00000461214 SEC31BQ9NQW1 1179 aa17.87■□□□□ 0.45
COL5A3-202ENST00000461214 CIAO1O76071 339 aa17.86■□□□□ 0.45
COL5A3-202ENST00000461214 HSP90AB4PQ58FF6 505 aa17.86■□□□□ 0.45
COL5A3-202ENST00000461214 CLEC11AQ9Y240 323 aa17.86■□□□□ 0.45
COL5A3-202ENST00000461214 BBOX1O75936 387 aa17.85■□□□□ 0.45
COL5A3-202ENST00000461214 RPS8P62241 208 aaKnown RBP17.85■□□□□ 0.45
COL5A3-202ENST00000461214 DEFB115Q30KQ5 88 aa17.85■□□□□ 0.45
COL5A3-202ENST00000461214 CELF1Q92879 486 aaKnown RBP17.85■□□□□ 0.45
COL5A3-202ENST00000461214 MPHOSPH8Q99549 860 aa17.85■□□□□ 0.45
COL5A3-202ENST00000461214 RWDD1Q9H446 243 aaPredicted RBP17.85■□□□□ 0.45
COL5A3-202ENST00000461214 BSDC1Q9NW68 430 aaPredicted RBP17.85■□□□□ 0.45
COL5A3-202ENST00000461214 NOP58Q9Y2X3 529 aaKnown RBP17.85■□□□□ 0.45
COL5A3-202ENST00000461214 SNED1Q8TER0 1413 aa17.84■□□□□ 0.45
COL5A3-202ENST00000461214 IQCA1LA6NCM1 817 aa17.84■□□□□ 0.45
COL5A3-202ENST00000461214 PPEF1O14829 653 aaPredicted RBP17.84■□□□□ 0.45
COL5A3-202ENST00000461214 MAP2K1Q02750 393 aaPredicted RBP17.84■□□□□ 0.45
COL5A3-202ENST00000461214 PRPF40BQ6NWY9 871 aaKnown RBP17.84■□□□□ 0.45
COL5A3-202ENST00000461214 TAOK3Q9H2K8 898 aa17.84■□□□□ 0.45
COL5A3-202ENST00000461214 ABT1Q9ULW3 272 aaKnown RBP17.84■□□□□ 0.45
COL5A3-202ENST00000461214 ZNF646O15015 1829 aaPredicted RBP17.84■□□□□ 0.45
COL5A3-202ENST00000461214 MROH5Q6ZUA9 1318 aa17.83■□□□□ 0.44
COL5A3-202ENST00000461214 WDR33Q9C0J8 1336 aaKnown RBP17.83■□□□□ 0.44
COL5A3-202ENST00000461214 MYH7P12883 1935 aa17.83■□□□□ 0.44
COL5A3-202ENST00000461214 EYA2O00167 538 aa17.83■□□□□ 0.44
COL5A3-202ENST00000461214 RGS19P49795 217 aa17.83■□□□□ 0.44
COL5A3-202ENST00000461214 GRM1Q13255 1194 aa17.83■□□□□ 0.44
COL5A3-202ENST00000461214 LDHAL6AQ6ZMR3 332 aa17.83■□□□□ 0.44
COL5A3-202ENST00000461214 ERC1Q8IUD2 1116 aa17.83■□□□□ 0.44
COL5A3-202ENST00000461214 GCC1Q96CN9 775 aa17.83■□□□□ 0.44
COL5A3-202ENST00000461214 TAF1DQ9H5J8 278 aaPredicted RBP17.83■□□□□ 0.44
COL5A3-202ENST00000461214 PPP4R2Q9NY27 417 aa17.83■□□□□ 0.44
COL5A3-202ENST00000461214 ZNF609O15014 1411 aa17.82■□□□□ 0.44
COL5A3-202ENST00000461214 ITGBL1O95965 494 aaPredicted RBP17.82■□□□□ 0.44
COL5A3-202ENST00000461214 IL15P40933 162 aaPredicted RBP17.82■□□□□ 0.44
COL5A3-202ENST00000461214 PAXIP1Q6ZW49 1069 aaPredicted RBP17.82■□□□□ 0.44
COL5A3-202ENST00000461214 KLHDC4Q8TBB5 520 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms