RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 TIAM2Q8IVF5 1701 aa20.36■□□□□ 0.85
SHANK1-205ENST00000461154 COL4A1P02462 1669 aa20.36■□□□□ 0.85
SHANK1-205ENST00000461154 PPIP5K2O43314 1243 aa20.36■□□□□ 0.85
SHANK1-205ENST00000461154 TOMM70O94826 608 aa20.36■□□□□ 0.85
SHANK1-205ENST00000461154 TAF7LQ5H9L4 462 aa20.36■□□□□ 0.85
SHANK1-205ENST00000461154 ITPRIPQ8IWB1 547 aa20.36■□□□□ 0.85
SHANK1-205ENST00000461154 MPHOSPH8Q99549 860 aa20.36■□□□□ 0.85
SHANK1-205ENST00000461154 BSDC1Q9NW68 430 aaPredicted RBP20.36■□□□□ 0.85
SHANK1-205ENST00000461154 NSFL1CQ9UNZ2 370 aaKnown RBP20.36■□□□□ 0.85
SHANK1-205ENST00000461154 SPEF2Q9C093 1822 aa20.36■□□□□ 0.85
SHANK1-205ENST00000461154 DDNO94850 711 aaPredicted RBP20.35■□□□□ 0.85
SHANK1-205ENST00000461154 EIF6P56537 245 aaKnown RBP20.35■□□□□ 0.85
SHANK1-205ENST00000461154 NIM1KQ8IY84 436 aa20.35■□□□□ 0.85
SHANK1-205ENST00000461154 RLBP1P12271 317 aa20.34■□□□□ 0.85
SHANK1-205ENST00000461154 AOC3Q16853 763 aa20.34■□□□□ 0.85
SHANK1-205ENST00000461154 ANKRD44Q8N8A2 993 aa20.34■□□□□ 0.85
SHANK1-205ENST00000461154 GPSM2P81274 684 aa20.33■□□□□ 0.85
SHANK1-205ENST00000461154 KIAA2012Q0VF49 1180 aa20.33■□□□□ 0.85
SHANK1-205ENST00000461154 PANK1Q8TE04 598 aa20.33■□□□□ 0.85
SHANK1-205ENST00000461154 LRRFIP2Q9Y608 721 aaKnown RBP20.33■□□□□ 0.85
SHANK1-205ENST00000461154 C6orf229H3BNL8 230 aa20.32■□□□□ 0.84
SHANK1-205ENST00000461154 PLIN1O60240 522 aa20.32■□□□□ 0.84
SHANK1-205ENST00000461154 RBM46Q8TBY0 533 aaKnown RBP20.32■□□□□ 0.84
SHANK1-205ENST00000461154 EYA3Q99504 573 aa20.32■□□□□ 0.84
SHANK1-205ENST00000461154 PODXL2Q9NZ53 605 aa20.32■□□□□ 0.84
SHANK1-205ENST00000461154 ANKIB1Q9P2G1 1089 aa20.32■□□□□ 0.84
SHANK1-205ENST00000461154 ZNF541Q9H0D2 1346 aa20.31■□□□□ 0.84
SHANK1-205ENST00000461154 POTECB2RU33 542 aa20.31■□□□□ 0.84
SHANK1-205ENST00000461154 GNAI2P04899 355 aa20.31■□□□□ 0.84
SHANK1-205ENST00000461154 PDE3AQ14432 1141 aa20.31■□□□□ 0.84
SHANK1-205ENST00000461154 WASHC4Q2M389 1173 aa20.31■□□□□ 0.84
SHANK1-205ENST00000461154 GPC2Q8N158 579 aa20.31■□□□□ 0.84
SHANK1-205ENST00000461154 L3MBTL3Q96JM7 780 aaPredicted RBP20.31■□□□□ 0.84
SHANK1-205ENST00000461154 ZNRF3Q9ULT6 936 aa20.31■□□□□ 0.84
SHANK1-205ENST00000461154 XDHP47989 1333 aa20.3■□□□□ 0.84
SHANK1-205ENST00000461154 IQCA1LA6NCM1 817 aa20.3■□□□□ 0.84
SHANK1-205ENST00000461154 LDHAL6AQ6ZMR3 332 aa20.3■□□□□ 0.84
SHANK1-205ENST00000461154 ANKRD2Q9GZV1 360 aa20.3■□□□□ 0.84
SHANK1-205ENST00000461154 CHMP4BQ9H444 224 aaKnown RBP20.3■□□□□ 0.84
SHANK1-205ENST00000461154 POLLQ9UGP5 575 aa20.3■□□□□ 0.84
SHANK1-205ENST00000461154 GGA1Q9UJY5 639 aa20.3■□□□□ 0.84
SHANK1-205ENST00000461154 MINPP1Q9UNW1 487 aa20.3■□□□□ 0.84
SHANK1-205ENST00000461154 LTBP1Q14766 1721 aa20.3■□□□□ 0.84
SHANK1-205ENST00000461154 MVPQ14764 893 aaKnown RBP20.29■□□□□ 0.84
SHANK1-205ENST00000461154 TBC1D16Q8TBP0 767 aa20.29■□□□□ 0.84
SHANK1-205ENST00000461154 CNNM1Q9NRU3 951 aa20.29■□□□□ 0.84
SHANK1-205ENST00000461154 WDR90Q96KV7 1748 aa20.29■□□□□ 0.84
SHANK1-205ENST00000461154 DUOX1Q9NRD9 1551 aa20.29■□□□□ 0.84
SHANK1-205ENST00000461154 ZBTB7BO15156 539 aaPredicted RBP20.28■□□□□ 0.84
SHANK1-205ENST00000461154 UFL1O94874 794 aa20.28■□□□□ 0.84
SHANK1-205ENST00000461154 ATP2B4P23634 1241 aa20.28■□□□□ 0.84
SHANK1-205ENST00000461154 ZNF594Q96JF6 807 aaPredicted RBP20.28■□□□□ 0.84
SHANK1-205ENST00000461154 DDX19BQ9UMR2 479 aa20.28■□□□□ 0.84
SHANK1-205ENST00000461154 GJA3Q9Y6H8 435 aa20.28■□□□□ 0.84
SHANK1-205ENST00000461154 COL4A5P29400 1685 aa20.27■□□□□ 0.84
SHANK1-205ENST00000461154 FSTL1Q12841 308 aa20.27■□□□□ 0.84
SHANK1-205ENST00000461154 ZC3H12CQ9C0D7 883 aaKnown RBP20.27■□□□□ 0.84
SHANK1-205ENST00000461154 COG6Q9Y2V7 657 aa20.27■□□□□ 0.84
SHANK1-205ENST00000461154 RIMBP2O15034 1052 aa20.26■□□□□ 0.83
SHANK1-205ENST00000461154 RRP1P56182 461 aaKnown RBP20.26■□□□□ 0.83
SHANK1-205ENST00000461154 CHRNDQ07001 517 aa20.26■□□□□ 0.83
SHANK1-205ENST00000461154 MTX1Q13505 466 aa20.26■□□□□ 0.83
SHANK1-205ENST00000461154 SMC1BQ8NDV3 1235 aa20.26■□□□□ 0.83
SHANK1-205ENST00000461154 HACL1Q9UJ83 578 aa20.26■□□□□ 0.83
SHANK1-205ENST00000461154 LEMD3Q9Y2U8 911 aa20.26■□□□□ 0.83
SHANK1-205ENST00000461154 CXCL9Q07325 125 aa20.25■□□□□ 0.83
SHANK1-205ENST00000461154 TNIP1Q15025 636 aa20.25■□□□□ 0.83
SHANK1-205ENST00000461154 G3V3G9 751 aa20.24■□□□□ 0.83
SHANK1-205ENST00000461154 SRGAP3O43295 1099 aa20.24■□□□□ 0.83
SHANK1-205ENST00000461154 LMOD1P29536 600 aaPredicted RBP20.24■□□□□ 0.83
SHANK1-205ENST00000461154 KCNJ4P48050 445 aa20.24■□□□□ 0.83
SHANK1-205ENST00000461154 RFX5P48382 616 aaPredicted RBP20.24■□□□□ 0.83
SHANK1-205ENST00000461154 DCAF8Q5TAQ9 597 aa20.24■□□□□ 0.83
SHANK1-205ENST00000461154 CIAPIN1Q6FI81 312 aa20.24■□□□□ 0.83
SHANK1-205ENST00000461154 TAF1DQ9H5J8 278 aaPredicted RBP20.24■□□□□ 0.83
SHANK1-205ENST00000461154 FBXO3Q9UK99 471 aa20.24■□□□□ 0.83
SHANK1-205ENST00000461154 MROH5Q6ZUA9 1318 aa20.24■□□□□ 0.83
SHANK1-205ENST00000461154 HSPA6P17066 643 aa20.23■□□□□ 0.83
SHANK1-205ENST00000461154 PTPN12Q05209 780 aaKnown RBP20.23■□□□□ 0.83
SHANK1-205ENST00000461154 C20orf194Q5TEA3 1177 aa20.23■□□□□ 0.83
SHANK1-205ENST00000461154 A0A1B0GUL6 1792 aa20.23■□□□□ 0.83
SHANK1-205ENST00000461154 EPHX2P34913 555 aa20.22■□□□□ 0.83
SHANK1-205ENST00000461154 PNMA8AQ86V59 439 aaPredicted RBP20.22■□□□□ 0.83
SHANK1-205ENST00000461154 KLHDC4Q8TBB5 520 aa20.22■□□□□ 0.83
SHANK1-205ENST00000461154 GPR101Q96P66 508 aaPredicted RBP20.22■□□□□ 0.83
SHANK1-205ENST00000461154 PUS3Q9BZE2 481 aaKnown RBP20.22■□□□□ 0.83
SHANK1-205ENST00000461154 DBNDD1Q9H9R9 158 aa20.22■□□□□ 0.83
SHANK1-205ENST00000461154 RIPOR2Q9Y4F9 1068 aa20.22■□□□□ 0.83
SHANK1-205ENST00000461154 ZNF804BA4D1E1 1349 aa20.22■□□□□ 0.83
SHANK1-205ENST00000461154 MED23Q9ULK4 1368 aa20.21■□□□□ 0.83
SHANK1-205ENST00000461154 YDJCA8MPS7 323 aa20.21■□□□□ 0.83
SHANK1-205ENST00000461154 EYA2O00167 538 aa20.21■□□□□ 0.83
SHANK1-205ENST00000461154 RAD17O75943 681 aa20.21■□□□□ 0.83
SHANK1-205ENST00000461154 DOK7Q18PE1 504 aa20.21■□□□□ 0.83
SHANK1-205ENST00000461154 C1orf115Q9H7X2 142 aa20.21■□□□□ 0.83
SHANK1-205ENST00000461154 COPRSQ9NQ92 184 aa20.21■□□□□ 0.83
SHANK1-205ENST00000461154 ECE2O60344 883 aa20.2■□□□□ 0.82
SHANK1-205ENST00000461154 TAF5LO75529 589 aa20.2■□□□□ 0.82
SHANK1-205ENST00000461154 CIAO1O76071 339 aa20.2■□□□□ 0.82
SHANK1-205ENST00000461154 LRRC24Q50LG9 513 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms