RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 PDE3AQ14432 1141 aa13.85□□□□□ -0.19
APTX-209ENST00000460940 TAF7LQ5H9L4 462 aa13.85□□□□□ -0.19
APTX-209ENST00000460940 MPHOSPH8Q99549 860 aa13.85□□□□□ -0.19
APTX-209ENST00000460940 PODXL2Q9NZ53 605 aa13.85□□□□□ -0.19
APTX-209ENST00000460940 LRRFIP2Q9Y608 721 aaKnown RBP13.85□□□□□ -0.19
APTX-209ENST00000460940 SBF1O95248 1867 aa13.85□□□□□ -0.19
APTX-209ENST00000460940 GNAI2P04899 355 aa13.84□□□□□ -0.19
APTX-209ENST00000460940 PANK1Q8TE04 598 aa13.84□□□□□ -0.19
APTX-209ENST00000460940 DUOX1Q9NRD9 1551 aa13.84□□□□□ -0.19
APTX-209ENST00000460940 XDHP47989 1333 aa13.84□□□□□ -0.19
APTX-209ENST00000460940 IARSP41252 1262 aaKnown RBP13.84□□□□□ -0.19
APTX-209ENST00000460940 PRELPP51888 382 aa13.84□□□□□ -0.19
APTX-209ENST00000460940 SLC51AQ86UW1 340 aa13.84□□□□□ -0.19
APTX-209ENST00000460940 ZNF277Q9NRM2 450 aaPredicted RBP13.84□□□□□ -0.19
APTX-209ENST00000460940 TIAM2Q8IVF5 1701 aa13.83□□□□□ -0.2
APTX-209ENST00000460940 GPSM2P81274 684 aa13.83□□□□□ -0.2
APTX-209ENST00000460940 MVPQ14764 893 aaKnown RBP13.83□□□□□ -0.2
APTX-209ENST00000460940 ANKRD2Q9GZV1 360 aa13.83□□□□□ -0.2
APTX-209ENST00000460940 CHMP4BQ9H444 224 aaKnown RBP13.83□□□□□ -0.2
APTX-209ENST00000460940 MINPP1Q9UNW1 487 aa13.83□□□□□ -0.2
APTX-209ENST00000460940 NSFL1CQ9UNZ2 370 aaKnown RBP13.83□□□□□ -0.2
APTX-209ENST00000460940 SPEF2Q9C093 1822 aa13.82□□□□□ -0.2
APTX-209ENST00000460940 PLIN1O60240 522 aa13.82□□□□□ -0.2
APTX-209ENST00000460940 MTX1Q13505 466 aa13.82□□□□□ -0.2
APTX-209ENST00000460940 ANKIB1Q9P2G1 1089 aa13.82□□□□□ -0.2
APTX-209ENST00000460940 GGA1Q9UJY5 639 aa13.82□□□□□ -0.2
APTX-209ENST00000460940 DDX19BQ9UMR2 479 aa13.82□□□□□ -0.2
APTX-209ENST00000460940 DICER1Q9UPY3 1922 aaKnown RBP13.82□□□□□ -0.2
APTX-209ENST00000460940 ZBTB7BO15156 539 aaPredicted RBP13.82□□□□□ -0.2
APTX-209ENST00000460940 RRP1P56182 461 aaKnown RBP13.82□□□□□ -0.2
APTX-209ENST00000460940 EYA3Q99504 573 aa13.82□□□□□ -0.2
APTX-209ENST00000460940 PPIP5K2O43314 1243 aa13.81□□□□□ -0.2
APTX-209ENST00000460940 ATP2B4P23634 1241 aa13.81□□□□□ -0.2
APTX-209ENST00000460940 KIAA2012Q0VF49 1180 aa13.81□□□□□ -0.2
APTX-209ENST00000460940 LDHAL6AQ6ZMR3 332 aa13.81□□□□□ -0.2
APTX-209ENST00000460940 TBC1D16Q8TBP0 767 aa13.81□□□□□ -0.2
APTX-209ENST00000460940 JDP2Q8WYK2 163 aa13.81□□□□□ -0.2
APTX-209ENST00000460940 CNNM1Q9NRU3 951 aa13.81□□□□□ -0.2
APTX-209ENST00000460940 C6orf229H3BNL8 230 aa13.8□□□□□ -0.2
APTX-209ENST00000460940 UFL1O94874 794 aa13.8□□□□□ -0.2
APTX-209ENST00000460940 LARGE2Q8N3Y3 721 aa13.8□□□□□ -0.2
APTX-209ENST00000460940 ZNF594Q96JF6 807 aaPredicted RBP13.8□□□□□ -0.2
APTX-209ENST00000460940 FBXO3Q9UK99 471 aa13.8□□□□□ -0.2
APTX-209ENST00000460940 RFX5P48382 616 aaPredicted RBP13.8□□□□□ -0.2
APTX-209ENST00000460940 CHRNDQ07001 517 aa13.8□□□□□ -0.2
APTX-209ENST00000460940 POLLQ9UGP5 575 aa13.8□□□□□ -0.2
APTX-209ENST00000460940 LEMD3Q9Y2U8 911 aa13.8□□□□□ -0.2
APTX-209ENST00000460940 COG6Q9Y2V7 657 aa13.8□□□□□ -0.2
APTX-209ENST00000460940 MROH5Q6ZUA9 1318 aa13.79□□□□□ -0.2
APTX-209ENST00000460940 AOC3Q16853 763 aa13.79□□□□□ -0.2
APTX-209ENST00000460940 WASHC4Q2M389 1173 aa13.79□□□□□ -0.2
APTX-209ENST00000460940 NIM1KQ8IY84 436 aa13.79□□□□□ -0.2
APTX-209ENST00000460940 NOP58Q9Y2X3 529 aaKnown RBP13.79□□□□□ -0.2
APTX-209ENST00000460940 MED23Q9ULK4 1368 aa13.79□□□□□ -0.2
APTX-209ENST00000460940 CCDC88AQ3V6T2 1871 aa13.79□□□□□ -0.2
APTX-209ENST00000460940 SRGAP3O43295 1099 aa13.78□□□□□ -0.2
APTX-209ENST00000460940 A0A1B0GUL6 1792 aa13.78□□□□□ -0.2
APTX-209ENST00000460940 COL4A5P29400 1685 aa13.78□□□□□ -0.2
APTX-209ENST00000460940 FZD9O00144 591 aa13.78□□□□□ -0.2
APTX-209ENST00000460940 CIAO1O76071 339 aa13.78□□□□□ -0.2
APTX-209ENST00000460940 PTPN12Q05209 780 aaKnown RBP13.78□□□□□ -0.2
APTX-209ENST00000460940 C20orf194Q5TEA3 1177 aa13.78□□□□□ -0.2
APTX-209ENST00000460940 ZC3H12CQ9C0D7 883 aaKnown RBP13.78□□□□□ -0.2
APTX-209ENST00000460940 COPRSQ9NQ92 184 aa13.78□□□□□ -0.2
APTX-209ENST00000460940 RIPOR2Q9Y4F9 1068 aa13.78□□□□□ -0.2
APTX-209ENST00000460940 ZNF804BA4D1E1 1349 aa13.77□□□□□ -0.2
APTX-209ENST00000460940 KDM2BQ8NHM5 1336 aa13.77□□□□□ -0.2
APTX-209ENST00000460940 EYA2O00167 538 aa13.77□□□□□ -0.21
APTX-209ENST00000460940 KCNJ4P48050 445 aa13.77□□□□□ -0.21
APTX-209ENST00000460940 DPY19L2Q6NUT2 758 aa13.76□□□□□ -0.21
APTX-209ENST00000460940 PUS3Q9BZE2 481 aaKnown RBP13.76□□□□□ -0.21
APTX-209ENST00000460940 ZBTB40Q9NUA8 1239 aa13.76□□□□□ -0.21
APTX-209ENST00000460940 ZNRF3Q9ULT6 936 aa13.76□□□□□ -0.21
APTX-209ENST00000460940 GLTPD2A6NH11 291 aa13.76□□□□□ -0.21
APTX-209ENST00000460940 EIF6P56537 245 aaKnown RBP13.76□□□□□ -0.21
APTX-209ENST00000460940 LRRC24Q50LG9 513 aa13.76□□□□□ -0.21
APTX-209ENST00000460940 METTL24Q5JXM2 366 aa13.76□□□□□ -0.21
APTX-209ENST00000460940 C15orf52Q6ZUT6 534 aaKnown RBP13.76□□□□□ -0.21
APTX-209ENST00000460940 ZNF784Q8NCA9 323 aaPredicted RBP13.76□□□□□ -0.21
APTX-209ENST00000460940 KLHDC4Q8TBB5 520 aa13.76□□□□□ -0.21
APTX-209ENST00000460940 C1orf115Q9H7X2 142 aa13.76□□□□□ -0.21
APTX-209ENST00000460940 IL15P40933 162 aaPredicted RBP13.75□□□□□ -0.21
APTX-209ENST00000460940 ATP8B2P98198 1209 aa13.75□□□□□ -0.21
APTX-209ENST00000460940 POLA2Q14181 598 aa13.75□□□□□ -0.21
APTX-209ENST00000460940 PNMA6EA0A0J9YXQ4 647 aa13.74□□□□□ -0.21
APTX-209ENST00000460940 RIMBP2O15034 1052 aa13.74□□□□□ -0.21
APTX-209ENST00000460940 UBE4AQ14139 1066 aa13.74□□□□□ -0.21
APTX-209ENST00000460940 CEP85Q6P2H3 762 aa13.74□□□□□ -0.21
APTX-209ENST00000460940 VGLL2Q8N8G2 317 aa13.74□□□□□ -0.21
APTX-209ENST00000460940 SSH3Q8TE77 659 aa13.74□□□□□ -0.21
APTX-209ENST00000460940 GPR101Q96P66 508 aaPredicted RBP13.74□□□□□ -0.21
APTX-209ENST00000460940 ZNF541Q9H0D2 1346 aa13.74□□□□□ -0.21
APTX-209ENST00000460940 TAF5LO75529 589 aa13.74□□□□□ -0.21
APTX-209ENST00000460940 PDE8BO95263 885 aa13.74□□□□□ -0.21
APTX-209ENST00000460940 ATG9AQ7Z3C6 839 aa13.74□□□□□ -0.21
APTX-209ENST00000460940 GPC2Q8N158 579 aa13.74□□□□□ -0.21
APTX-209ENST00000460940 HELBQ8NG08 1087 aaPredicted RBP13.74□□□□□ -0.21
APTX-209ENST00000460940 GPBP1L1Q9HC44 474 aaPredicted RBP13.74□□□□□ -0.21
APTX-209ENST00000460940 G3V3G9 751 aa13.73□□□□□ -0.21
APTX-209ENST00000460940 ECE2O60344 883 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms