RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 TRPM4Q8TD43 1214 aa12.09□□□□□ -0.47
COL6A2-207ENST00000460886 GPR101Q96P66 508 aaPredicted RBP12.09□□□□□ -0.47
COL6A2-207ENST00000460886 BCL2L13Q9BXK5 485 aa12.09□□□□□ -0.47
COL6A2-207ENST00000460886 PODXL2Q9NZ53 605 aa12.09□□□□□ -0.47
COL6A2-207ENST00000460886 POLLQ9UGP5 575 aa12.09□□□□□ -0.47
COL6A2-207ENST00000460886 CNOT7Q9UIV1 285 aaKnown RBP12.09□□□□□ -0.47
COL6A2-207ENST00000460886 RPS12P25398 132 aaKnown RBP12.08□□□□□ -0.48
COL6A2-207ENST00000460886 RPS8P62241 208 aaKnown RBP12.08□□□□□ -0.48
COL6A2-207ENST00000460886 CYP4F22Q6NT55 531 aa12.08□□□□□ -0.48
COL6A2-207ENST00000460886 CDC37L1Q7L3B6 337 aa12.08□□□□□ -0.48
COL6A2-207ENST00000460886 G2E3Q7L622 706 aa12.08□□□□□ -0.48
COL6A2-207ENST00000460886 GLIS2Q9BZE0 524 aaPredicted RBP12.08□□□□□ -0.48
COL6A2-207ENST00000460886 NSFL1CQ9UNZ2 370 aaKnown RBP12.08□□□□□ -0.48
COL6A2-207ENST00000460886 RTL9Q8NET4 1388 aa12.07□□□□□ -0.48
COL6A2-207ENST00000460886 SHTN1A0MZ66 631 aa12.07□□□□□ -0.48
COL6A2-207ENST00000460886 H7C1D1 291 aa12.07□□□□□ -0.48
COL6A2-207ENST00000460886 PSMD14O00487 310 aa12.07□□□□□ -0.48
COL6A2-207ENST00000460886 CELF2O95319 508 aaKnown RBP12.07□□□□□ -0.48
COL6A2-207ENST00000460886 PCCAP05165 728 aaPredicted RBP12.07□□□□□ -0.48
COL6A2-207ENST00000460886 HSP90B1P14625 803 aaKnown RBP12.07□□□□□ -0.48
COL6A2-207ENST00000460886 GPSM2P81274 684 aa12.07□□□□□ -0.48
COL6A2-207ENST00000460886 RIC3Q7Z5B4 369 aa12.07□□□□□ -0.48
COL6A2-207ENST00000460886 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
COL6A2-207ENST00000460886 CCDC191Q8NCU4 936 aa12.07□□□□□ -0.48
COL6A2-207ENST00000460886 TBC1D16Q8TBP0 767 aa12.07□□□□□ -0.48
COL6A2-207ENST00000460886 EYA3Q99504 573 aa12.07□□□□□ -0.48
COL6A2-207ENST00000460886 POLR2AP24928 1970 aaKnown RBP12.07□□□□□ -0.48
COL6A2-207ENST00000460886 MYH3P11055 1940 aa12.06□□□□□ -0.48
COL6A2-207ENST00000460886 CA12O43570 354 aa12.06□□□□□ -0.48
COL6A2-207ENST00000460886 DDX58O95786 925 aaKnown RBP12.06□□□□□ -0.48
COL6A2-207ENST00000460886 DBNDD1Q9H9R9 158 aa12.06□□□□□ -0.48
COL6A2-207ENST00000460886 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
COL6A2-207ENST00000460886 ZNF646O15015 1829 aaPredicted RBP12.05□□□□□ -0.48
COL6A2-207ENST00000460886 C6orf229H3BNL8 230 aa12.05□□□□□ -0.48
COL6A2-207ENST00000460886 ECE2O60344 883 aa12.05□□□□□ -0.48
COL6A2-207ENST00000460886 VIL1P09327 827 aaKnown RBP12.05□□□□□ -0.48
COL6A2-207ENST00000460886 BRPF1P55201 1214 aaPredicted RBP12.05□□□□□ -0.48
COL6A2-207ENST00000460886 FLIIQ13045 1269 aa12.05□□□□□ -0.48
COL6A2-207ENST00000460886 ZNF428Q96B54 188 aa12.05□□□□□ -0.48
COL6A2-207ENST00000460886 METTL22Q9BUU2 404 aaPredicted RBP12.05□□□□□ -0.48
COL6A2-207ENST00000460886 CACNA1FO60840 1977 aa12.05□□□□□ -0.48
COL6A2-207ENST00000460886 PI4KAP2A4QPH2 592 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 PDE8AO60658 829 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 AOC2O75106 756 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 EGFRP00533 1210 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 CT47B1P0C2W7 299 aaPredicted RBP12.04□□□□□ -0.48
COL6A2-207ENST00000460886 FKBP5Q13451 457 aaPredicted RBP12.04□□□□□ -0.48
COL6A2-207ENST00000460886 CCDC152Q4G0S7 254 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 RTL5Q5HYW3 569 aaPredicted RBP12.04□□□□□ -0.48
COL6A2-207ENST00000460886 KSR2Q6VAB6 950 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 PAXIP1Q6ZW49 1069 aaPredicted RBP12.04□□□□□ -0.48
COL6A2-207ENST00000460886 SAMD7Q7Z3H4 446 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 PI4KAP1Q8N8J0 262 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 SSH1Q8WYL5 1049 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 ABHD8Q96I13 439 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 MYD88Q99836 296 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 BEGAINQ9BUH8 593 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 SEC31BQ9NQW1 1179 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 KCNQ5Q9NR82 932 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 CWC25Q9NXE8 425 aaPredicted RBP12.04□□□□□ -0.48
COL6A2-207ENST00000460886 MAP3K2Q9Y2U5 619 aa12.04□□□□□ -0.48
COL6A2-207ENST00000460886 RIMBP2O15034 1052 aa12.03□□□□□ -0.48
COL6A2-207ENST00000460886 ZNF280AP59817 542 aaPredicted RBP12.03□□□□□ -0.48
COL6A2-207ENST00000460886 MRPL50Q8N5N7 158 aaKnown RBP12.03□□□□□ -0.48
COL6A2-207ENST00000460886 YTHDC1Q96MU7 727 aaKnown RBP12.03□□□□□ -0.48
COL6A2-207ENST00000460886 ZC3H12CQ9C0D7 883 aaKnown RBP12.03□□□□□ -0.48
COL6A2-207ENST00000460886 UFL1O94874 794 aa12.02□□□□□ -0.49
COL6A2-207ENST00000460886 NOGQ13253 232 aa12.02□□□□□ -0.49
COL6A2-207ENST00000460886 DOK7Q18PE1 504 aa12.02□□□□□ -0.49
COL6A2-207ENST00000460886 ALDH1L2Q3SY69 923 aa12.02□□□□□ -0.49
COL6A2-207ENST00000460886 TBC1D10BQ4KMP7 808 aaPredicted RBP12.02□□□□□ -0.49
COL6A2-207ENST00000460886 USP48Q86UV5 1035 aa12.02□□□□□ -0.49
COL6A2-207ENST00000460886 AGBL3Q8NEM8 1001 aa12.02□□□□□ -0.49
COL6A2-207ENST00000460886 SMC4Q9NTJ3 1288 aa12.02□□□□□ -0.49
COL6A2-207ENST00000460886 GGA1Q9UJY5 639 aa12.02□□□□□ -0.49
COL6A2-207ENST00000460886 XDHP47989 1333 aa12.02□□□□□ -0.49
COL6A2-207ENST00000460886 FAM155AB1AL88 458 aaPredicted RBP12.01□□□□□ -0.49
COL6A2-207ENST00000460886 F6X3S4 739 aa12.01□□□□□ -0.49
COL6A2-207ENST00000460886 IGKV5-2P06315 115 aa12.01□□□□□ -0.49
COL6A2-207ENST00000460886 GRM1Q13255 1194 aa12.01□□□□□ -0.49
COL6A2-207ENST00000460886 KRT26Q7Z3Y9 468 aa12.01□□□□□ -0.49
COL6A2-207ENST00000460886 DNAAF4Q8WXU2 420 aa12.01□□□□□ -0.49
COL6A2-207ENST00000460886 GMLQ99445 158 aa12.01□□□□□ -0.49
COL6A2-207ENST00000460886 ZNF408Q9H9D4 720 aa12.01□□□□□ -0.49
COL6A2-207ENST00000460886 ANKIB1Q9P2G1 1089 aa12.01□□□□□ -0.49
COL6A2-207ENST00000460886 SPEF2Q9C093 1822 aa12.01□□□□□ -0.49
COL6A2-207ENST00000460886 CASP8AP2Q9UKL3 1982 aa12□□□□□ -0.49
COL6A2-207ENST00000460886 RARSP54136 660 aaKnown RBP12□□□□□ -0.49
COL6A2-207ENST00000460886 CTSWP56202 376 aa12□□□□□ -0.49
COL6A2-207ENST00000460886 HUNKP57058 714 aa12□□□□□ -0.49
COL6A2-207ENST00000460886 NEXNQ0ZGT2 675 aa12□□□□□ -0.49
COL6A2-207ENST00000460886 KIF4BQ2VIQ3 1234 aa12□□□□□ -0.49
COL6A2-207ENST00000460886 RSBN1LQ6PCB5 846 aaPredicted RBP12□□□□□ -0.49
COL6A2-207ENST00000460886 DLK2Q6UY11 383 aa12□□□□□ -0.49
COL6A2-207ENST00000460886 PODNQ7Z5L7 613 aa12□□□□□ -0.49
COL6A2-207ENST00000460886 ANKRD18AQ8IVF6 992 aa12□□□□□ -0.49
COL6A2-207ENST00000460886 TTLL11Q8NHH1 800 aa12□□□□□ -0.49
COL6A2-207ENST00000460886 DCPSQ96C86 337 aaKnown RBP12□□□□□ -0.49
COL6A2-207ENST00000460886 GBA2Q9HCG7 927 aaPredicted RBP12□□□□□ -0.49
COL6A2-207ENST00000460886 MED23Q9ULK4 1368 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms