RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 TAF7LQ5H9L4 462 aa17.51■□□□□ 0.39
HDLBP-229ENST00000460826 C9orf131Q5VYM1 1079 aa17.51■□□□□ 0.39
HDLBP-229ENST00000460826 DPP8Q6V1X1 898 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-229ENST00000460826 PSMD1Q99460 953 aa17.51■□□□□ 0.39
HDLBP-229ENST00000460826 MPHOSPH8Q99549 860 aa17.51■□□□□ 0.39
HDLBP-229ENST00000460826 TMX4Q9H1E5 349 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-229ENST00000460826 NSFL1CQ9UNZ2 370 aaKnown RBP17.51■□□□□ 0.39
HDLBP-229ENST00000460826 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
HDLBP-229ENST00000460826 COL4A5P29400 1685 aa17.51■□□□□ 0.39
HDLBP-229ENST00000460826 WTIPA6NIX2 430 aaPredicted RBP17.5■□□□□ 0.39
HDLBP-229ENST00000460826 MTX1Q13505 466 aa17.5■□□□□ 0.39
HDLBP-229ENST00000460826 RTFDC1Q9BY42 306 aaPredicted RBP17.5■□□□□ 0.39
HDLBP-229ENST00000460826 PNMA6EA0A0J9YXQ4 647 aa17.49■□□□□ 0.39
HDLBP-229ENST00000460826 LMNB1P20700 586 aa17.49■□□□□ 0.39
HDLBP-229ENST00000460826 PTPN12Q05209 780 aaKnown RBP17.49■□□□□ 0.39
HDLBP-229ENST00000460826 GRIPAP1Q4V328 841 aa17.49■□□□□ 0.39
HDLBP-229ENST00000460826 LRRC24Q50LG9 513 aa17.49■□□□□ 0.39
HDLBP-229ENST00000460826 LDHAL6AQ6ZMR3 332 aa17.49■□□□□ 0.39
HDLBP-229ENST00000460826 GPR101Q96P66 508 aaPredicted RBP17.49■□□□□ 0.39
HDLBP-229ENST00000460826 ZBTB40Q9NUA8 1239 aa17.49■□□□□ 0.39
HDLBP-229ENST00000460826 PODXL2Q9NZ53 605 aa17.49■□□□□ 0.39
HDLBP-229ENST00000460826 RNF181Q9P0P0 153 aa17.49■□□□□ 0.39
HDLBP-229ENST00000460826 POLLQ9UGP5 575 aa17.49■□□□□ 0.39
HDLBP-229ENST00000460826 PA2G4Q9UQ80 394 aaKnown RBP17.49■□□□□ 0.39
HDLBP-229ENST00000460826 SRGAP3O43295 1099 aa17.48■□□□□ 0.39
HDLBP-229ENST00000460826 CHRNDQ07001 517 aa17.48■□□□□ 0.39
HDLBP-229ENST00000460826 HELBQ8NG08 1087 aaPredicted RBP17.48■□□□□ 0.39
HDLBP-229ENST00000460826 TBC1D16Q8TBP0 767 aa17.48■□□□□ 0.39
HDLBP-229ENST00000460826 CNNM1Q9NRU3 951 aa17.48■□□□□ 0.39
HDLBP-229ENST00000460826 ANKIB1Q9P2G1 1089 aa17.48■□□□□ 0.39
HDLBP-229ENST00000460826 XDHP47989 1333 aa17.47■□□□□ 0.39
HDLBP-229ENST00000460826 IARSP41252 1262 aaKnown RBP17.47■□□□□ 0.39
HDLBP-229ENST00000460826 ATP8B2P98198 1209 aa17.47■□□□□ 0.39
HDLBP-229ENST00000460826 CRBNQ96SW2 442 aa17.47■□□□□ 0.39
HDLBP-229ENST00000460826 RIPOR2Q9Y4F9 1068 aa17.47■□□□□ 0.39
HDLBP-229ENST00000460826 C6orf229H3BNL8 230 aa17.46■□□□□ 0.39
HDLBP-229ENST00000460826 SNAP23O00161 211 aa17.46■□□□□ 0.39
HDLBP-229ENST00000460826 TAF5LO75529 589 aa17.46■□□□□ 0.39
HDLBP-229ENST00000460826 UFL1O94874 794 aa17.46■□□□□ 0.39
HDLBP-229ENST00000460826 AOC3Q16853 763 aa17.46■□□□□ 0.39
HDLBP-229ENST00000460826 CEP85Q6P2H3 762 aa17.46■□□□□ 0.39
HDLBP-229ENST00000460826 SIL1Q9H173 461 aa17.46■□□□□ 0.39
HDLBP-229ENST00000460826 GGA1Q9UJY5 639 aa17.46■□□□□ 0.39
HDLBP-229ENST00000460826 EYA2O00167 538 aa17.45■□□□□ 0.38
HDLBP-229ENST00000460826 PPIP5K2O43314 1243 aa17.45■□□□□ 0.38
HDLBP-229ENST00000460826 POLA2Q14181 598 aa17.45■□□□□ 0.38
HDLBP-229ENST00000460826 ATG9AQ7Z3C6 839 aa17.45■□□□□ 0.38
HDLBP-229ENST00000460826 SUPT20HQ8NEM7 779 aa17.45■□□□□ 0.38
HDLBP-229ENST00000460826 ANKRD2Q9GZV1 360 aa17.45■□□□□ 0.38
HDLBP-229ENST00000460826 COPRSQ9NQ92 184 aa17.45■□□□□ 0.38
HDLBP-229ENST00000460826 RIMBP2O15034 1052 aa17.44■□□□□ 0.38
HDLBP-229ENST00000460826 ATP2B4P23634 1241 aa17.44■□□□□ 0.38
HDLBP-229ENST00000460826 KIAA2012Q0VF49 1180 aa17.44■□□□□ 0.38
HDLBP-229ENST00000460826 LARGE2Q8N3Y3 721 aa17.44■□□□□ 0.38
HDLBP-229ENST00000460826 SSH3Q8TE77 659 aa17.44■□□□□ 0.38
HDLBP-229ENST00000460826 SCN9AQ15858 1988 aa17.43■□□□□ 0.38
HDLBP-229ENST00000460826 KLRK1P26718 216 aa17.43■□□□□ 0.38
HDLBP-229ENST00000460826 CHMP4BQ9H444 224 aaKnown RBP17.43■□□□□ 0.38
HDLBP-229ENST00000460826 WASHC4Q2M389 1173 aa17.42■□□□□ 0.38
HDLBP-229ENST00000460826 METTL24Q5JXM2 366 aa17.42■□□□□ 0.38
HDLBP-229ENST00000460826 TXNRD3Q86VQ6 643 aa17.42■□□□□ 0.38
HDLBP-229ENST00000460826 SIRT2Q8IXJ6 389 aa17.42■□□□□ 0.38
HDLBP-229ENST00000460826 VGLL2Q8N8G2 317 aa17.42■□□□□ 0.38
HDLBP-229ENST00000460826 LEMD3Q9Y2U8 911 aa17.42■□□□□ 0.38
HDLBP-229ENST00000460826 ZNF804BA4D1E1 1349 aa17.42■□□□□ 0.38
HDLBP-229ENST00000460826 MROH5Q6ZUA9 1318 aa17.42■□□□□ 0.38
HDLBP-229ENST00000460826 IRS2Q9Y4H2 1338 aa17.42■□□□□ 0.38
HDLBP-229ENST00000460826 CIAO1O76071 339 aa17.41■□□□□ 0.38
HDLBP-229ENST00000460826 YY1P25490 414 aa17.41■□□□□ 0.38
HDLBP-229ENST00000460826 EYA3Q99504 573 aa17.41■□□□□ 0.38
HDLBP-229ENST00000460826 VPS33BQ9H267 617 aa17.41■□□□□ 0.38
HDLBP-229ENST00000460826 MED23Q9ULK4 1368 aa17.4■□□□□ 0.38
HDLBP-229ENST00000460826 IRX6P78412 446 aaPredicted RBP17.4■□□□□ 0.38
HDLBP-229ENST00000460826 DOK7Q18PE1 504 aa17.4■□□□□ 0.38
HDLBP-229ENST00000460826 RPAP2Q8IXW5 612 aaPredicted RBP17.4■□□□□ 0.38
HDLBP-229ENST00000460826 ZC3H12CQ9C0D7 883 aaKnown RBP17.4■□□□□ 0.38
HDLBP-229ENST00000460826 DBNDD1Q9H9R9 158 aa17.4■□□□□ 0.38
HDLBP-229ENST00000460826 FBXO3Q9UK99 471 aa17.4■□□□□ 0.38
HDLBP-229ENST00000460826 ZNF541Q9H0D2 1346 aa17.4■□□□□ 0.38
HDLBP-229ENST00000460826 PSME4Q14997 1843 aa17.4■□□□□ 0.38
HDLBP-229ENST00000460826 FZD9O00144 591 aa17.39■□□□□ 0.37
HDLBP-229ENST00000460826 PDE8BO95263 885 aa17.39■□□□□ 0.37
HDLBP-229ENST00000460826 IL15P40933 162 aaPredicted RBP17.39■□□□□ 0.37
HDLBP-229ENST00000460826 KCNJ4P48050 445 aa17.39■□□□□ 0.37
HDLBP-229ENST00000460826 NIM1KQ8IY84 436 aa17.39■□□□□ 0.37
HDLBP-229ENST00000460826 EXOC6Q8TAG9 804 aa17.39■□□□□ 0.37
HDLBP-229ENST00000460826 JDP2Q8WYK2 163 aa17.39■□□□□ 0.37
HDLBP-229ENST00000460826 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.39■□□□□ 0.37
HDLBP-229ENST00000460826 ZNF646O15015 1829 aaPredicted RBP17.39■□□□□ 0.37
HDLBP-229ENST00000460826 YDJCA8MPS7 323 aa17.38■□□□□ 0.37
HDLBP-229ENST00000460826 UBE4AQ14139 1066 aa17.38■□□□□ 0.37
HDLBP-229ENST00000460826 PCDHB15Q9Y5E8 787 aa17.38■□□□□ 0.37
HDLBP-229ENST00000460826 ZC3H4Q9UPT8 1303 aaKnown RBP17.38■□□□□ 0.37
HDLBP-229ENST00000460826 ARAP2Q8WZ64 1704 aa17.38■□□□□ 0.37
HDLBP-229ENST00000460826 ECE2O60344 883 aa17.37■□□□□ 0.37
HDLBP-229ENST00000460826 SURF6O75683 361 aaKnown RBP17.37■□□□□ 0.37
HDLBP-229ENST00000460826 FGFR2P21802 821 aa17.37■□□□□ 0.37
HDLBP-229ENST00000460826 TFCP2Q12800 502 aa17.37■□□□□ 0.37
HDLBP-229ENST00000460826 G3BP1Q13283 466 aaKnown RBP eCLIP17.37■□□□□ 0.37
HDLBP-229ENST00000460826 KCNQ5Q9NR82 932 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms