RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 GOLGA6L1Q8N7Z2 621 aa8.07□□□□□ -1.12
VBP1-202ENST00000460509 SPACA7Q96KW9 195 aa8.07□□□□□ -1.12
VBP1-202ENST00000460509 AVENQ9NQS1 362 aaPredicted RBP8.07□□□□□ -1.12
VBP1-202ENST00000460509 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.07□□□□□ -1.12
VBP1-202ENST00000460509 ZBTB42B2RXF5 422 aa8.06□□□□□ -1.12
VBP1-202ENST00000460509 GHRHP01286 108 aa8.06□□□□□ -1.12
VBP1-202ENST00000460509 EIF2AK2P19525 551 aaKnown RBP8.06□□□□□ -1.12
VBP1-202ENST00000460509 SOX18P35713 384 aa8.06□□□□□ -1.12
VBP1-202ENST00000460509 ADH7P40394 386 aa8.06□□□□□ -1.12
VBP1-202ENST00000460509 RBM25P49756 843 aaKnown RBP8.06□□□□□ -1.12
VBP1-202ENST00000460509 COL13A1Q5TAT6 717 aaPredicted RBP8.06□□□□□ -1.12
VBP1-202ENST00000460509 ALG1LQ6GMV1 187 aa8.06□□□□□ -1.12
VBP1-202ENST00000460509 FBXO33Q7Z6M2 555 aa8.06□□□□□ -1.12
VBP1-202ENST00000460509 FAM35AQ86V20 835 aa8.06□□□□□ -1.12
VBP1-202ENST00000460509 CCDC74AQ96AQ1 378 aa8.06□□□□□ -1.12
VBP1-202ENST00000460509 NLRP2Q9NX02 1062 aa8.06□□□□□ -1.12
VBP1-202ENST00000460509 LOC102724428A0A0B4J2F2 783 aa8.05□□□□□ -1.12
VBP1-202ENST00000460509 GADD45BO75293 160 aaPredicted RBP8.05□□□□□ -1.12
VBP1-202ENST00000460509 ALAS2P22557 587 aa8.05□□□□□ -1.12
VBP1-202ENST00000460509 IRS1P35568 1242 aa8.05□□□□□ -1.12
VBP1-202ENST00000460509 NRLP54845 237 aa8.05□□□□□ -1.12
VBP1-202ENST00000460509 SIK1P57059 783 aa8.05□□□□□ -1.12
VBP1-202ENST00000460509 XPCQ01831 940 aaPredicted RBP8.05□□□□□ -1.12
VBP1-202ENST00000460509 PCSK7Q16549 785 aa8.05□□□□□ -1.12
VBP1-202ENST00000460509 FCHSD1Q86WN1 690 aa8.05□□□□□ -1.12
VBP1-202ENST00000460509 MICALL1Q8N3F8 863 aa8.05□□□□□ -1.12
VBP1-202ENST00000460509 EPS8L3Q8TE67 593 aaKnown RBP8.05□□□□□ -1.12
VBP1-202ENST00000460509 ACDQ96AP0 544 aa8.05□□□□□ -1.12
VBP1-202ENST00000460509 ZNF428Q96B54 188 aa8.05□□□□□ -1.12
VBP1-202ENST00000460509 RBSNQ9H1K0 784 aa8.05□□□□□ -1.12
VBP1-202ENST00000460509 NPHS2Q9NP85 383 aa8.05□□□□□ -1.12
VBP1-202ENST00000460509 GDF2Q9UK05 429 aaPredicted RBP8.05□□□□□ -1.12
VBP1-202ENST00000460509 PRPF40AO75400 957 aaKnown RBP8.04□□□□□ -1.12
VBP1-202ENST00000460509 EDN3P14138 238 aa8.04□□□□□ -1.12
VBP1-202ENST00000460509 ZNF16P17020 682 aaPredicted RBP8.04□□□□□ -1.12
VBP1-202ENST00000460509 GPLD1P80108 840 aa8.04□□□□□ -1.12
VBP1-202ENST00000460509 PI16Q6UXB8 463 aa8.04□□□□□ -1.12
VBP1-202ENST00000460509 GALNT6Q8NCL4 622 aa8.04□□□□□ -1.12
VBP1-202ENST00000460509 TRPM4Q8TD43 1214 aa8.04□□□□□ -1.12
VBP1-202ENST00000460509 TNFRSF25Q93038 417 aa8.04□□□□□ -1.12
VBP1-202ENST00000460509 DUSP9Q99956 384 aaKnown RBP8.04□□□□□ -1.12
VBP1-202ENST00000460509 LATS2Q9NRM7 1088 aa8.04□□□□□ -1.12
VBP1-202ENST00000460509 SLC6A14Q9UN76 642 aa8.04□□□□□ -1.12
VBP1-202ENST00000460509 ELOA3CA0A087WX78 387 aaPredicted RBP8.03□□□□□ -1.12
VBP1-202ENST00000460509 ELOA3DA6NLF2 546 aaPredicted RBP8.03□□□□□ -1.12
VBP1-202ENST00000460509 TRPA1O75762 1119 aa8.03□□□□□ -1.12
VBP1-202ENST00000460509 ACPPP15309 386 aa8.03□□□□□ -1.12
VBP1-202ENST00000460509 FGD1P98174 961 aa8.03□□□□□ -1.12
VBP1-202ENST00000460509 ELOA3BQ3SY89 546 aa8.03□□□□□ -1.12
VBP1-202ENST00000460509 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.03□□□□□ -1.12
VBP1-202ENST00000460509 ELOA3Q8NG57 546 aa8.03□□□□□ -1.12
VBP1-202ENST00000460509 BCL11AQ9H165 835 aa8.03□□□□□ -1.12
VBP1-202ENST00000460509 RNF19AQ9NV58 838 aa8.03□□□□□ -1.12
VBP1-202ENST00000460509 PARP2Q9UGN5 583 aa8.03□□□□□ -1.12
VBP1-202ENST00000460509 SALL4Q9UJQ4 1053 aa8.03□□□□□ -1.12
VBP1-202ENST00000460509 AMPD1P23109 780 aa8.02□□□□□ -1.13
VBP1-202ENST00000460509 ELMSAN1Q6PJG2 1045 aa8.02□□□□□ -1.13
VBP1-202ENST00000460509 SLCO4C1Q6ZQN7 724 aa8.02□□□□□ -1.13
VBP1-202ENST00000460509 GALNT12Q8IXK2 581 aa8.02□□□□□ -1.13
VBP1-202ENST00000460509 NUDT8Q8WV74 236 aa8.02□□□□□ -1.13
VBP1-202ENST00000460509 EDARADDQ8WWZ3 215 aa8.02□□□□□ -1.13
VBP1-202ENST00000460509 FAM161BQ96MY7 647 aa8.02□□□□□ -1.13
VBP1-202ENST00000460509 OSMRQ99650 979 aa8.02□□□□□ -1.13
VBP1-202ENST00000460509 EHD4Q9H223 541 aa8.02□□□□□ -1.13
VBP1-202ENST00000460509 RBM47A0AV96 593 aaKnown RBP8.01□□□□□ -1.13
VBP1-202ENST00000460509 ADARB2-AS1A8MUL3 147 aa8.01□□□□□ -1.13
VBP1-202ENST00000460509 KIF4AO95239 1232 aa8.01□□□□□ -1.13
VBP1-202ENST00000460509 EPXP11678 715 aa8.01□□□□□ -1.13
VBP1-202ENST00000460509 ATP11AP98196 1134 aa8.01□□□□□ -1.13
VBP1-202ENST00000460509 C1orf229Q6ZS94 237 aaPredicted RBP8.01□□□□□ -1.13
VBP1-202ENST00000460509 FBF1Q8TES7 1133 aa8.01□□□□□ -1.13
VBP1-202ENST00000460509 MRS2Q9HD23 443 aa8.01□□□□□ -1.13
VBP1-202ENST00000460509 BCRP11274 1271 aa8□□□□□ -1.13
VBP1-202ENST00000460509 PSMD2Q13200 908 aa8□□□□□ -1.13
VBP1-202ENST00000460509 PERM1Q5SV97 790 aa8□□□□□ -1.13
VBP1-202ENST00000460509 CEP135Q66GS9 1140 aa8□□□□□ -1.13
VBP1-202ENST00000460509 PSAPL1Q6NUJ1 521 aa8□□□□□ -1.13
VBP1-202ENST00000460509 LYPD4Q6UWN0 246 aa8□□□□□ -1.13
VBP1-202ENST00000460509 CEP120Q8N960 986 aa8□□□□□ -1.13
VBP1-202ENST00000460509 PLD4Q96BZ4 506 aa8□□□□□ -1.13
VBP1-202ENST00000460509 SMG9Q9H0W8 520 aaKnown RBP8□□□□□ -1.13
VBP1-202ENST00000460509 RASSF4Q9H2L5 321 aa8□□□□□ -1.13
VBP1-202ENST00000460509 NAGPAQ9UK23 515 aa8□□□□□ -1.13
VBP1-202ENST00000460509 SPG7Q9UQ90 795 aa8□□□□□ -1.13
VBP1-202ENST00000460509 A0A1W2PP55 124 aa7.99□□□□□ -1.13
VBP1-202ENST00000460509 OIP5O43482 229 aa7.99□□□□□ -1.13
VBP1-202ENST00000460509 RGS9O75916 674 aaPredicted RBP7.99□□□□□ -1.13
VBP1-202ENST00000460509 CELA2BP08218 269 aaPredicted RBP7.99□□□□□ -1.13
VBP1-202ENST00000460509 SLURP2P0DP57 97 aa7.99□□□□□ -1.13
VBP1-202ENST00000460509 HOXD8P13378 290 aaPredicted RBP7.99□□□□□ -1.13
VBP1-202ENST00000460509 MAP3K10Q02779 954 aa7.99□□□□□ -1.13
VBP1-202ENST00000460509 PEAR1Q5VY43 1037 aaPredicted RBP7.99□□□□□ -1.13
VBP1-202ENST00000460509 WHAMMQ8TF30 809 aa7.99□□□□□ -1.13
VBP1-202ENST00000460509 ZKSCAN3Q9BRR0 538 aa7.99□□□□□ -1.13
VBP1-202ENST00000460509 LIN7BQ9HAP6 207 aa7.99□□□□□ -1.13
VBP1-202ENST00000460509 SMNDC1O75940 238 aaKnown RBP eCLIP7.98□□□□□ -1.13
VBP1-202ENST00000460509 GDF6Q6KF10 455 aaPredicted RBP7.98□□□□□ -1.13
VBP1-202ENST00000460509 SVOPQ8N4V2 548 aa7.98□□□□□ -1.13
VBP1-202ENST00000460509 NEDD1Q8NHV4 660 aa7.98□□□□□ -1.13
VBP1-202ENST00000460509 ASAP3Q8TDY4 903 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms