RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 TMC4Q7Z404 712 aa13.21□□□□□ -0.29
CDHR4-203ENST00000460430 SMC5Q8IY18 1101 aa13.21□□□□□ -0.29
CDHR4-203ENST00000460430 KIF1BPQ96EK5 621 aa13.21□□□□□ -0.29
CDHR4-203ENST00000460430 PUS3Q9BZE2 481 aaKnown RBP13.21□□□□□ -0.29
CDHR4-203ENST00000460430 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.29
CDHR4-203ENST00000460430 BSDC1Q9NW68 430 aaPredicted RBP13.21□□□□□ -0.29
CDHR4-203ENST00000460430 KIAA1551Q9HCM1 1747 aa13.2□□□□□ -0.3
CDHR4-203ENST00000460430 BBOX1O75936 387 aa13.2□□□□□ -0.3
CDHR4-203ENST00000460430 ANKRD45Q5TZF3 282 aa13.2□□□□□ -0.3
CDHR4-203ENST00000460430 ATG9AQ7Z3C6 839 aa13.2□□□□□ -0.3
CDHR4-203ENST00000460430 RHPN1Q8TCX5 695 aa13.2□□□□□ -0.3
CDHR4-203ENST00000460430 FHDC1Q9C0D6 1143 aaPredicted RBP13.2□□□□□ -0.3
CDHR4-203ENST00000460430 CEP126Q9P2H0 1117 aa13.2□□□□□ -0.3
CDHR4-203ENST00000460430 TAF1P21675 1872 aa13.2□□□□□ -0.3
CDHR4-203ENST00000460430 CACNA1SQ13698 1873 aa13.2□□□□□ -0.3
CDHR4-203ENST00000460430 KCNJ4P48050 445 aa13.19□□□□□ -0.3
CDHR4-203ENST00000460430 CHRNDQ07001 517 aa13.19□□□□□ -0.3
CDHR4-203ENST00000460430 TFCP2Q12800 502 aa13.19□□□□□ -0.3
CDHR4-203ENST00000460430 TTLL6Q8N841 843 aa13.19□□□□□ -0.3
CDHR4-203ENST00000460430 PIM2Q9P1W9 311 aa13.19□□□□□ -0.3
CDHR4-203ENST00000460430 LRRC37AA6NMS7 1700 aa13.19□□□□□ -0.3
CDHR4-203ENST00000460430 SMARCA5O60264 1052 aaPredicted RBP13.18□□□□□ -0.3
CDHR4-203ENST00000460430 SASH1O94885 1247 aa13.18□□□□□ -0.3
CDHR4-203ENST00000460430 NUCB1Q02818 461 aa13.18□□□□□ -0.3
CDHR4-203ENST00000460430 CHD1LQ86WJ1 897 aa13.18□□□□□ -0.3
CDHR4-203ENST00000460430 CLASRPQ8N2M8 674 aaKnown RBP13.18□□□□□ -0.3
CDHR4-203ENST00000460430 NLGN2Q8NFZ4 835 aa13.18□□□□□ -0.3
CDHR4-203ENST00000460430 ANKRD2Q9GZV1 360 aa13.18□□□□□ -0.3
CDHR4-203ENST00000460430 IL1RAPL2Q9NP60 686 aa13.18□□□□□ -0.3
CDHR4-203ENST00000460430 ANKIB1Q9P2G1 1089 aa13.18□□□□□ -0.3
CDHR4-203ENST00000460430 WWC3Q9ULE0 1092 aa13.18□□□□□ -0.3
CDHR4-203ENST00000460430 ATP6V0A2Q9Y487 856 aa13.18□□□□□ -0.3
CDHR4-203ENST00000460430 RIPOR2Q9Y4F9 1068 aa13.18□□□□□ -0.3
CDHR4-203ENST00000460430 ZNF609O15014 1411 aa13.18□□□□□ -0.3
CDHR4-203ENST00000460430 PUM3Q15397 648 aaKnown RBP13.17□□□□□ -0.3
CDHR4-203ENST00000460430 DALRD3Q5D0E6 543 aaKnown RBP13.17□□□□□ -0.3
CDHR4-203ENST00000460430 HELBQ8NG08 1087 aaPredicted RBP13.17□□□□□ -0.3
CDHR4-203ENST00000460430 LNPKQ9C0E8 428 aa13.17□□□□□ -0.3
CDHR4-203ENST00000460430 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
CDHR4-203ENST00000460430 MINPP1Q9UNW1 487 aa13.17□□□□□ -0.3
CDHR4-203ENST00000460430 AKAP2Q9Y2D5 859 aa13.17□□□□□ -0.3
CDHR4-203ENST00000460430 XDHP47989 1333 aa13.16□□□□□ -0.3
CDHR4-203ENST00000460430 TAF5LO75529 589 aa13.16□□□□□ -0.3
CDHR4-203ENST00000460430 PDE8BO95263 885 aa13.16□□□□□ -0.3
CDHR4-203ENST00000460430 IFIT2P09913 472 aaKnown RBP13.16□□□□□ -0.3
CDHR4-203ENST00000460430 KCNA3P22001 575 aa13.16□□□□□ -0.3
CDHR4-203ENST00000460430 ATP2B3Q16720 1220 aa13.16□□□□□ -0.3
CDHR4-203ENST00000460430 TNNI3KQ59H18 835 aa13.16□□□□□ -0.3
CDHR4-203ENST00000460430 AACSQ86V21 672 aa13.16□□□□□ -0.3
CDHR4-203ENST00000460430 SP8Q8IXZ3 490 aa13.16□□□□□ -0.3
CDHR4-203ENST00000460430 FPGT-TNNI3KV9GXZ4 949 aa13.16□□□□□ -0.3
CDHR4-203ENST00000460430 A0A1B0GUL6 1792 aa13.16□□□□□ -0.3
CDHR4-203ENST00000460430 UFL1O94874 794 aa13.15□□□□□ -0.3
CDHR4-203ENST00000460430 SLC5A1P13866 664 aa13.15□□□□□ -0.3
CDHR4-203ENST00000460430 SOGA3Q5TF21 947 aa13.15□□□□□ -0.3
CDHR4-203ENST00000460430 VGLL2Q8N8G2 317 aa13.15□□□□□ -0.3
CDHR4-203ENST00000460430 GPATCH3Q96I76 525 aa13.15□□□□□ -0.3
CDHR4-203ENST00000460430 NEUROD6Q96NK8 337 aa13.15□□□□□ -0.3
CDHR4-203ENST00000460430 GGA1Q9UJY5 639 aa13.15□□□□□ -0.3
CDHR4-203ENST00000460430 NSFL1CQ9UNZ2 370 aaKnown RBP13.15□□□□□ -0.3
CDHR4-203ENST00000460430 BCS1LQ9Y276 419 aa13.15□□□□□ -0.3
CDHR4-203ENST00000460430 SLX4Q8IY92 1834 aa13.15□□□□□ -0.3
CDHR4-203ENST00000460430 BRCA1P38398 1863 aaKnown RBP13.14□□□□□ -0.31
CDHR4-203ENST00000460430 A0A1B0GUL7 405 aa13.14□□□□□ -0.31
CDHR4-203ENST00000460430 C21orf2O43822 256 aa13.14□□□□□ -0.31
CDHR4-203ENST00000460430 IFIT1P09914 478 aaKnown RBP13.14□□□□□ -0.31
CDHR4-203ENST00000460430 GPSM2P81274 684 aa13.14□□□□□ -0.31
CDHR4-203ENST00000460430 CCDC93Q567U6 631 aa13.14□□□□□ -0.31
CDHR4-203ENST00000460430 CC2D2BQ6DHV5 1058 aa13.14□□□□□ -0.31
CDHR4-203ENST00000460430 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
CDHR4-203ENST00000460430 SLC51AQ86UW1 340 aa13.14□□□□□ -0.31
CDHR4-203ENST00000460430 LPIN2Q92539 896 aa13.14□□□□□ -0.31
CDHR4-203ENST00000460430 SYT17Q9BSW7 474 aa13.14□□□□□ -0.31
CDHR4-203ENST00000460430 GPR108Q9NPR9 543 aa13.14□□□□□ -0.31
CDHR4-203ENST00000460430 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
CDHR4-203ENST00000460430 ATP2B4P23634 1241 aa13.13□□□□□ -0.31
CDHR4-203ENST00000460430 UBE4AQ14139 1066 aa13.13□□□□□ -0.31
CDHR4-203ENST00000460430 GRIPAP1Q4V328 841 aa13.13□□□□□ -0.31
CDHR4-203ENST00000460430 GORABQ5T7V8 394 aa13.13□□□□□ -0.31
CDHR4-203ENST00000460430 OLFM4Q6UX06 510 aa13.13□□□□□ -0.31
CDHR4-203ENST00000460430 MPNDQ8N594 471 aa13.13□□□□□ -0.31
CDHR4-203ENST00000460430 CCDC8Q9H0W5 538 aaPredicted RBP13.13□□□□□ -0.31
CDHR4-203ENST00000460430 LEMD3Q9Y2U8 911 aa13.13□□□□□ -0.31
CDHR4-203ENST00000460430 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.13□□□□□ -0.31
CDHR4-203ENST00000460430 ARAP2Q8WZ64 1704 aa13.13□□□□□ -0.31
CDHR4-203ENST00000460430 C6orf229H3BNL8 230 aa13.12□□□□□ -0.31
CDHR4-203ENST00000460430 RGS3P49796 1198 aa13.12□□□□□ -0.31
CDHR4-203ENST00000460430 RTKN2Q8IZC4 609 aa13.12□□□□□ -0.31
CDHR4-203ENST00000460430 PELP1Q8IZL8 1130 aaKnown RBP13.12□□□□□ -0.31
CDHR4-203ENST00000460430 EAF2Q96CJ1 260 aaPredicted RBP13.12□□□□□ -0.31
CDHR4-203ENST00000460430 TLR7Q9NYK1 1049 aaKnown RBP13.12□□□□□ -0.31
CDHR4-203ENST00000460430 PODXL2Q9NZ53 605 aa13.12□□□□□ -0.31
CDHR4-203ENST00000460430 LTBP1Q14766 1721 aa13.12□□□□□ -0.31
CDHR4-203ENST00000460430 SNAP23O00161 211 aa13.11□□□□□ -0.31
CDHR4-203ENST00000460430 MX1P20591 662 aa13.11□□□□□ -0.31
CDHR4-203ENST00000460430 TIMM10P62072 90 aa13.11□□□□□ -0.31
CDHR4-203ENST00000460430 VPS37DQ86XT2 251 aa13.11□□□□□ -0.31
CDHR4-203ENST00000460430 SUPT20HQ8NEM7 779 aa13.11□□□□□ -0.31
CDHR4-203ENST00000460430 TBC1D16Q8TBP0 767 aa13.11□□□□□ -0.31
CDHR4-203ENST00000460430 XAGE2Q96GT9 111 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms