RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 ARHGEF1Q92888 912 aaKnown RBP9.73□□□□□ -0.85
SFPQ-202ENST00000460428 NEUROD6Q96NK8 337 aa9.73□□□□□ -0.85
SFPQ-202ENST00000460428 NYXQ9GZU5 481 aa9.73□□□□□ -0.85
SFPQ-202ENST00000460428 CNNM1Q9NRU3 951 aa9.73□□□□□ -0.85
SFPQ-202ENST00000460428 CCDC171Q6TFL3 1326 aa9.73□□□□□ -0.85
SFPQ-202ENST00000460428 ARAP2Q8WZ64 1704 aa9.73□□□□□ -0.85
SFPQ-202ENST00000460428 PLSCR1O15162 318 aa9.72□□□□□ -0.85
SFPQ-202ENST00000460428 GNPATO15228 680 aa9.72□□□□□ -0.85
SFPQ-202ENST00000460428 IFIT1P09914 478 aaKnown RBP9.72□□□□□ -0.85
SFPQ-202ENST00000460428 HCLS1P14317 486 aaPredicted RBP9.72□□□□□ -0.85
SFPQ-202ENST00000460428 SSFA2P28290 1259 aa9.72□□□□□ -0.85
SFPQ-202ENST00000460428 METTL24Q5JXM2 366 aa9.72□□□□□ -0.85
SFPQ-202ENST00000460428 TRAPPC3LQ5T215 181 aa9.72□□□□□ -0.85
SFPQ-202ENST00000460428 FAM182BQ5T319 152 aa9.72□□□□□ -0.85
SFPQ-202ENST00000460428 LPIN2Q92539 896 aa9.72□□□□□ -0.85
SFPQ-202ENST00000460428 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
SFPQ-202ENST00000460428 HELLSQ9NRZ9 838 aa9.72□□□□□ -0.85
SFPQ-202ENST00000460428 LRRC4BQ9NT99 713 aa9.72□□□□□ -0.85
SFPQ-202ENST00000460428 PAG1Q9NWQ8 432 aa9.72□□□□□ -0.85
SFPQ-202ENST00000460428 CHMP5Q9NZZ3 219 aa9.72□□□□□ -0.85
SFPQ-202ENST00000460428 PALD1Q9ULE6 856 aa9.72□□□□□ -0.85
SFPQ-202ENST00000460428 C4AP0C0L4 1744 aa9.71□□□□□ -0.85
SFPQ-202ENST00000460428 A0A0D9SFI3 127 aa9.71□□□□□ -0.86
SFPQ-202ENST00000460428 ZPR1O75312 459 aa9.71□□□□□ -0.86
SFPQ-202ENST00000460428 TAF5LO75529 589 aa9.71□□□□□ -0.86
SFPQ-202ENST00000460428 PUM3Q15397 648 aaKnown RBP9.71□□□□□ -0.86
SFPQ-202ENST00000460428 ATP2B3Q16720 1220 aa9.71□□□□□ -0.86
SFPQ-202ENST00000460428 LRRFIP1Q32MZ4 808 aaKnown RBP9.71□□□□□ -0.86
SFPQ-202ENST00000460428 ZMYM1Q5SVZ6 1142 aa9.71□□□□□ -0.86
SFPQ-202ENST00000460428 TBC1D9BQ66K14 1250 aa9.71□□□□□ -0.86
SFPQ-202ENST00000460428 FAM227BQ96M60 508 aa9.71□□□□□ -0.86
SFPQ-202ENST00000460428 SETDB2Q96T68 719 aa9.71□□□□□ -0.86
SFPQ-202ENST00000460428 ALDH8A1Q9H2A2 487 aaPredicted RBP9.71□□□□□ -0.86
SFPQ-202ENST00000460428 SNX14Q9Y5W7 946 aa9.71□□□□□ -0.86
SFPQ-202ENST00000460428 UBR3Q6ZT12 1888 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 ZFYP08048 801 aaPredicted RBP9.7□□□□□ -0.86
SFPQ-202ENST00000460428 UQCRFS1P1P0C7P4 283 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 ARID4AP29374 1257 aaPredicted RBP9.7□□□□□ -0.86
SFPQ-202ENST00000460428 ADORA1P30542 326 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 KCNQ4P56696 695 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 PTH1RQ03431 593 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 CUL4AQ13619 759 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 ERFEQ4G0M1 354 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 MCMDC2Q4G0Z9 681 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 TTC39AQ5SRH9 613 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 TPTE2Q6XPS3 522 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 AMIGO3Q86WK7 504 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 RASEFQ8IZ41 740 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 TTC14Q96N46 770 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 CCDC85AQ96PX6 553 aaPredicted RBP9.7□□□□□ -0.86
SFPQ-202ENST00000460428 CDC5LQ99459 802 aaKnown RBP9.7□□□□□ -0.86
SFPQ-202ENST00000460428 SEC31BQ9NQW1 1179 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 BSDC1Q9NW68 430 aaPredicted RBP9.7□□□□□ -0.86
SFPQ-202ENST00000460428 HMG20BQ9P0W2 317 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 AKAP11Q9UKA4 1901 aa9.7□□□□□ -0.86
SFPQ-202ENST00000460428 RNF113AO15541 343 aaKnown RBP9.69□□□□□ -0.86
SFPQ-202ENST00000460428 IGHMBP2P38935 993 aaKnown RBP9.69□□□□□ -0.86
SFPQ-202ENST00000460428 NEK4P51957 841 aa9.69□□□□□ -0.86
SFPQ-202ENST00000460428 NFKBIBQ15653 356 aa9.69□□□□□ -0.86
SFPQ-202ENST00000460428 EDC3Q96F86 508 aaKnown RBP9.69□□□□□ -0.86
SFPQ-202ENST00000460428 INTS4Q96HW7 963 aaKnown RBP9.69□□□□□ -0.86
SFPQ-202ENST00000460428 DNAJC2Q99543 621 aaKnown RBP9.69□□□□□ -0.86
SFPQ-202ENST00000460428 MPHOSPH8Q99549 860 aa9.69□□□□□ -0.86
SFPQ-202ENST00000460428 DSCC1Q9BVC3 393 aa9.69□□□□□ -0.86
SFPQ-202ENST00000460428 CWC22Q9HCG8 908 aaKnown RBP9.69□□□□□ -0.86
SFPQ-202ENST00000460428 ZSWIM6Q9HCJ5 1215 aa9.69□□□□□ -0.86
SFPQ-202ENST00000460428 SRP68Q9UHB9 627 aaKnown RBP9.69□□□□□ -0.86
SFPQ-202ENST00000460428 CASZ1Q86V15 1759 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 RPAP1Q9BWH6 1393 aaPredicted RBP9.68□□□□□ -0.86
SFPQ-202ENST00000460428 GOLIM4O00461 696 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 TM4SF1P30408 202 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 RFC4P35249 363 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 UBE4AQ14139 1066 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 TTF1Q15361 905 aaPredicted RBP9.68□□□□□ -0.86
SFPQ-202ENST00000460428 GORABQ5T7V8 394 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 VPS53Q5VIR6 699 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 RNF20Q5VTR2 975 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 CREB3L3Q68CJ9 461 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 CCDC102BQ68D86 513 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 CLEC17AQ6ZS10 378 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 DDX46Q7L014 1031 aaKnown RBP9.68□□□□□ -0.86
SFPQ-202ENST00000460428 ZNF589Q86UQ0 364 aaPredicted RBP9.68□□□□□ -0.86
SFPQ-202ENST00000460428 PROM2Q8N271 834 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 NLRP3Q96P20 1036 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 SLKQ9H2G2 1235 aaPredicted RBP9.68□□□□□ -0.86
SFPQ-202ENST00000460428 RBM8AQ9Y5S9 174 aaKnown RBP9.68□□□□□ -0.86
SFPQ-202ENST00000460428 U3KPZ7 1027 aaPredicted RBP9.68□□□□□ -0.86
SFPQ-202ENST00000460428 A0A1B0GUL6 1792 aa9.68□□□□□ -0.86
SFPQ-202ENST00000460428 CARMIL3Q8ND23 1372 aa9.67□□□□□ -0.86
SFPQ-202ENST00000460428 ZNF804BA4D1E1 1349 aa9.67□□□□□ -0.86
SFPQ-202ENST00000460428 SLC27A2O14975 620 aa9.67□□□□□ -0.86
SFPQ-202ENST00000460428 IGSF3O75054 1194 aa9.67□□□□□ -0.86
SFPQ-202ENST00000460428 SLC5A1P13866 664 aa9.67□□□□□ -0.86
SFPQ-202ENST00000460428 ZKSCAN1P17029 563 aaPredicted RBP9.67□□□□□ -0.86
SFPQ-202ENST00000460428 PSMA5P28066 241 aa9.67□□□□□ -0.86
SFPQ-202ENST00000460428 MCAMP43121 646 aa9.67□□□□□ -0.86
SFPQ-202ENST00000460428 SCARF1Q14162 830 aa9.67□□□□□ -0.86
SFPQ-202ENST00000460428 TXNRD1Q16881 649 aa9.67□□□□□ -0.86
SFPQ-202ENST00000460428 C3orf67Q6ZVT6 689 aa9.67□□□□□ -0.86
SFPQ-202ENST00000460428 ANKRD18AQ8IVF6 992 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms