RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 KRT26Q7Z3Y9 468 aa28.14■■■□□ 2.1
PDE6B-203ENST00000460119 ZBTB38Q8NAP3 1195 aaPredicted RBP28.14■■■□□ 2.1
PDE6B-203ENST00000460119 EYA3Q99504 573 aa28.14■■■□□ 2.1
PDE6B-203ENST00000460119 GOLGA2Q08379 1002 aa28.13■■■□□ 2.09
PDE6B-203ENST00000460119 C8orf58Q8NAV2 365 aa28.13■■■□□ 2.09
PDE6B-203ENST00000460119 ZC3H12CQ9C0D7 883 aaKnown RBP28.13■■■□□ 2.09
PDE6B-203ENST00000460119 ANKRD36CQ5JPF3 1778 aa28.13■■■□□ 2.09
PDE6B-203ENST00000460119 ASTN2O75129 1339 aaPredicted RBP28.13■■■□□ 2.09
PDE6B-203ENST00000460119 UFL1O94874 794 aa28.1■■■□□ 2.09
PDE6B-203ENST00000460119 BRPF1P55201 1214 aaPredicted RBP28.1■■■□□ 2.09
PDE6B-203ENST00000460119 FAM161AQ3B820 660 aa28.1■■■□□ 2.09
PDE6B-203ENST00000460119 DCPSQ96C86 337 aaKnown RBP28.1■■■□□ 2.09
PDE6B-203ENST00000460119 ANKIB1Q9P2G1 1089 aa28.1■■■□□ 2.09
PDE6B-203ENST00000460119 VIL1P09327 827 aaKnown RBP28.09■■■□□ 2.09
PDE6B-203ENST00000460119 RPS12P25398 132 aaKnown RBP28.09■■■□□ 2.09
PDE6B-203ENST00000460119 PRKRIP1Q9H875 184 aaPredicted RBP28.09■■■□□ 2.09
PDE6B-203ENST00000460119 IFT57Q9NWB7 429 aa28.09■■■□□ 2.09
PDE6B-203ENST00000460119 TRPM7Q96QT4 1865 aa28.08■■■□□ 2.09
PDE6B-203ENST00000460119 THSD7BQ9C0I4 1608 aa28.08■■■□□ 2.09
PDE6B-203ENST00000460119 WTIPA6NIX2 430 aaPredicted RBP28.08■■■□□ 2.09
PDE6B-203ENST00000460119 G3V3G9 751 aa28.08■■■□□ 2.09
PDE6B-203ENST00000460119 DCAF8Q5TAQ9 597 aa28.08■■■□□ 2.09
PDE6B-203ENST00000460119 GBA2Q9HCG7 927 aaPredicted RBP28.08■■■□□ 2.09
PDE6B-203ENST00000460119 PODXL2Q9NZ53 605 aa28.08■■■□□ 2.09
PDE6B-203ENST00000460119 DDX60Q8IY21 1712 aaKnown RBP28.07■■■□□ 2.08
PDE6B-203ENST00000460119 PCCAP05165 728 aaPredicted RBP28.07■■■□□ 2.08
PDE6B-203ENST00000460119 GNAI1P63096 354 aa28.07■■■□□ 2.08
PDE6B-203ENST00000460119 KIF4BQ2VIQ3 1234 aa28.07■■■□□ 2.08
PDE6B-203ENST00000460119 RGMBQ6NW40 437 aa28.07■■■□□ 2.08
PDE6B-203ENST00000460119 MCOLN1Q9GZU1 580 aa28.07■■■□□ 2.08
PDE6B-203ENST00000460119 GGA1Q9UJY5 639 aa28.07■■■□□ 2.08
PDE6B-203ENST00000460119 CA12O43570 354 aa28.06■■■□□ 2.08
PDE6B-203ENST00000460119 NOGQ13253 232 aa28.06■■■□□ 2.08
PDE6B-203ENST00000460119 C2orf69Q8N8R5 385 aa28.06■■■□□ 2.08
PDE6B-203ENST00000460119 CCDC191Q8NCU4 936 aa28.06■■■□□ 2.08
PDE6B-203ENST00000460119 FAM155AB1AL88 458 aaPredicted RBP28.05■■■□□ 2.08
PDE6B-203ENST00000460119 PDE8AO60658 829 aa28.05■■■□□ 2.08
PDE6B-203ENST00000460119 CCDC152Q4G0S7 254 aa28.05■■■□□ 2.08
PDE6B-203ENST00000460119 TSPYL6Q8N831 410 aa28.05■■■□□ 2.08
PDE6B-203ENST00000460119 METTL22Q9BUU2 404 aaPredicted RBP28.05■■■□□ 2.08
PDE6B-203ENST00000460119 CWC25Q9NXE8 425 aaPredicted RBP28.05■■■□□ 2.08
PDE6B-203ENST00000460119 KIF23Q02241 960 aaPredicted RBP28.04■■■□□ 2.08
PDE6B-203ENST00000460119 GGA3Q9NZ52 723 aa28.04■■■□□ 2.08
PDE6B-203ENST00000460119 LRRC37AA6NMS7 1700 aa28.03■■■□□ 2.08
PDE6B-203ENST00000460119 ZNF157P51786 506 aaPredicted RBP28.02■■■□□ 2.08
PDE6B-203ENST00000460119 DGKZQ13574 1117 aa28.02■■■□□ 2.08
PDE6B-203ENST00000460119 SCARF1Q14162 830 aa28.02■■■□□ 2.08
PDE6B-203ENST00000460119 SCAF8Q9UPN6 1271 aaKnown RBP28.02■■■□□ 2.08
PDE6B-203ENST00000460119 MAP3K2Q9Y2U5 619 aa28.02■■■□□ 2.08
PDE6B-203ENST00000460119 HSP90B1P14625 803 aaKnown RBP28.01■■■□□ 2.07
PDE6B-203ENST00000460119 RSBN1LQ6PCB5 846 aaPredicted RBP28.01■■■□□ 2.07
PDE6B-203ENST00000460119 ANKRD18AQ8IVF6 992 aa28.01■■■□□ 2.07
PDE6B-203ENST00000460119 SULF1Q8IWU6 871 aa28.01■■■□□ 2.07
PDE6B-203ENST00000460119 CALD1Q05682 793 aaKnown RBP28■■■□□ 2.07
PDE6B-203ENST00000460119 ANGEL2Q5VTE6 544 aaKnown RBP28■■■□□ 2.07
PDE6B-203ENST00000460119 CDCA5Q96FF9 252 aa28■■■□□ 2.07
PDE6B-203ENST00000460119 IGKV5-2P06315 115 aa27.99■■■□□ 2.07
PDE6B-203ENST00000460119 ZNF280AP59817 542 aaPredicted RBP27.99■■■□□ 2.07
PDE6B-203ENST00000460119 CCDC30Q5VVM6 783 aa27.99■■■□□ 2.07
PDE6B-203ENST00000460119 DDX58O95786 925 aaKnown RBP27.98■■■□□ 2.07
PDE6B-203ENST00000460119 TSR2Q969E8 191 aaKnown RBP27.98■■■□□ 2.07
PDE6B-203ENST00000460119 CCDC102AQ96A19 550 aa27.98■■■□□ 2.07
PDE6B-203ENST00000460119 GMLQ99445 158 aa27.98■■■□□ 2.07
PDE6B-203ENST00000460119 MXD3Q9BW11 206 aa27.98■■■□□ 2.07
PDE6B-203ENST00000460119 PI4KAP2A4QPH2 592 aa27.97■■■□□ 2.07
PDE6B-203ENST00000460119 PI4KAP1Q8N8J0 262 aa27.97■■■□□ 2.07
PDE6B-203ENST00000460119 AGBL3Q8NEM8 1001 aa27.97■■■□□ 2.07
PDE6B-203ENST00000460119 XDHP47989 1333 aa27.96■■■□□ 2.07
PDE6B-203ENST00000460119 TRPA1O75762 1119 aa27.96■■■□□ 2.07
PDE6B-203ENST00000460119 ATP2B4P23634 1241 aa27.96■■■□□ 2.07
PDE6B-203ENST00000460119 RGS19P49795 217 aa27.96■■■□□ 2.07
PDE6B-203ENST00000460119 MLLT1Q03111 559 aaPredicted RBP27.96■■■□□ 2.07
PDE6B-203ENST00000460119 CCDC184Q52MB2 194 aa27.96■■■□□ 2.07
PDE6B-203ENST00000460119 KSR2Q6VAB6 950 aa27.96■■■□□ 2.07
PDE6B-203ENST00000460119 RNF186Q9NXI6 227 aa27.96■■■□□ 2.07
PDE6B-203ENST00000460119 USP17L8P0C7I0 530 aa27.95■■■□□ 2.06
PDE6B-203ENST00000460119 CTSWP56202 376 aa27.95■■■□□ 2.06
PDE6B-203ENST00000460119 CWF19L2Q2TBE0 894 aaKnown RBP27.95■■■□□ 2.06
PDE6B-203ENST00000460119 MOB2Q70IA6 237 aa27.95■■■□□ 2.06
PDE6B-203ENST00000460119 G2E3Q7L622 706 aa27.95■■■□□ 2.06
PDE6B-203ENST00000460119 TTLL11Q8NHH1 800 aa27.95■■■□□ 2.06
PDE6B-203ENST00000460119 CSRNP1Q96S65 589 aa27.95■■■□□ 2.06
PDE6B-203ENST00000460119 GREM2Q9H772 168 aa27.95■■■□□ 2.06
PDE6B-203ENST00000460119 USP17L3A6NCW0 530 aa27.94■■■□□ 2.06
PDE6B-203ENST00000460119 USP17L4A6NCW7 530 aa27.94■■■□□ 2.06
PDE6B-203ENST00000460119 PRAMEF18Q5VWM3 479 aa27.94■■■□□ 2.06
PDE6B-203ENST00000460119 USP17L1Q7RTZ2 530 aa27.94■■■□□ 2.06
PDE6B-203ENST00000460119 MYOZ2Q9NPC6 264 aa27.94■■■□□ 2.06
PDE6B-203ENST00000460119 MINPP1Q9UNW1 487 aa27.94■■■□□ 2.06
PDE6B-203ENST00000460119 SLC10A3P09131 477 aa27.93■■■□□ 2.06
PDE6B-203ENST00000460119 CDC5LQ99459 802 aaKnown RBP27.92■■■□□ 2.06
PDE6B-203ENST00000460119 PODNQ7Z5L7 613 aa27.91■■■□□ 2.06
PDE6B-203ENST00000460119 SCN9AQ15858 1988 aa27.91■■■□□ 2.06
PDE6B-203ENST00000460119 CASP8AP2Q9UKL3 1982 aa27.91■■■□□ 2.06
PDE6B-203ENST00000460119 NBPF9Q3BBW0 867 aa27.9■■■□□ 2.06
PDE6B-203ENST00000460119 TXNRD3Q86VQ6 643 aa27.9■■■□□ 2.06
PDE6B-203ENST00000460119 FBXW7Q969H0 707 aa27.9■■■□□ 2.06
PDE6B-203ENST00000460119 BSDC1Q9NW68 430 aaPredicted RBP27.9■■■□□ 2.06
PDE6B-203ENST00000460119 UBE2Q2LH0YL09 131 aa27.89■■■□□ 2.06
PDE6B-203ENST00000460119 NEURL1BA8MQ27 555 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms