RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 CTSHP09668 335 aa8.84□□□□□ -0.99
CCDC50-203ENST00000460064 HYAL2Q12891 473 aa8.84□□□□□ -0.99
CCDC50-203ENST00000460064 KIAA0319Q5VV43 1072 aa8.84□□□□□ -0.99
CCDC50-203ENST00000460064 DHX32Q7L7V1 743 aaKnown RBP8.84□□□□□ -0.99
CCDC50-203ENST00000460064 SUV39H2Q9H5I1 410 aa8.84□□□□□ -0.99
CCDC50-203ENST00000460064 LATS2Q9NRM7 1088 aa8.84□□□□□ -0.99
CCDC50-203ENST00000460064 FAM8A1Q9UBU6 413 aa8.84□□□□□ -0.99
CCDC50-203ENST00000460064 SOX18P35713 384 aa8.83□□□□□ -1
CCDC50-203ENST00000460064 HDLBPQ00341 1268 aaKnown RBP8.83□□□□□ -1
CCDC50-203ENST00000460064 PEAR1Q5VY43 1037 aaPredicted RBP8.83□□□□□ -1
CCDC50-203ENST00000460064 NANOS1Q8WY41 292 aaKnown RBP8.83□□□□□ -1
CCDC50-203ENST00000460064 RNF34Q969K3 372 aa8.83□□□□□ -1
CCDC50-203ENST00000460064 CRELD1Q96HD1 420 aa8.83□□□□□ -1
CCDC50-203ENST00000460064 SRCIN1Q9C0H9 1055 aa8.83□□□□□ -1
CCDC50-203ENST00000460064 A0A1W2PP55 124 aa8.82□□□□□ -1
CCDC50-203ENST00000460064 LCE2BO14633 110 aa8.82□□□□□ -1
CCDC50-203ENST00000460064 VEGFBP49765 207 aa8.82□□□□□ -1
CCDC50-203ENST00000460064 GRM2Q14416 872 aa8.82□□□□□ -1
CCDC50-203ENST00000460064 COL13A1Q5TAT6 717 aaPredicted RBP8.82□□□□□ -1
CCDC50-203ENST00000460064 SPACA7Q96KW9 195 aa8.82□□□□□ -1
CCDC50-203ENST00000460064 NSUN5Q96P11 429 aaKnown RBP8.82□□□□□ -1
CCDC50-203ENST00000460064 LOC102724428A0A0B4J2F2 783 aa8.81□□□□□ -1
CCDC50-203ENST00000460064 USP17L7P0C7H9 530 aa8.81□□□□□ -1
CCDC50-203ENST00000460064 BMP4P12644 408 aa8.81□□□□□ -1
CCDC50-203ENST00000460064 ERCC5P28715 1186 aaPredicted RBP8.81□□□□□ -1
CCDC50-203ENST00000460064 ZNF76P36508 570 aa8.81□□□□□ -1
CCDC50-203ENST00000460064 SIK1P57059 783 aa8.81□□□□□ -1
CCDC50-203ENST00000460064 SYT9Q86SS6 491 aa8.81□□□□□ -1
CCDC50-203ENST00000460064 OSMRQ99650 979 aa8.81□□□□□ -1
CCDC50-203ENST00000460064 METTL5Q9NRN9 209 aaKnown RBP8.81□□□□□ -1
CCDC50-203ENST00000460064 TRAK1Q9UPV9 953 aa8.81□□□□□ -1
CCDC50-203ENST00000460064 KIF4AO95239 1232 aa8.8□□□□□ -1
CCDC50-203ENST00000460064 MX2P20592 715 aa8.8□□□□□ -1
CCDC50-203ENST00000460064 NRLP54845 237 aa8.8□□□□□ -1
CCDC50-203ENST00000460064 FANCCQ00597 558 aa8.8□□□□□ -1
CCDC50-203ENST00000460064 MLLT1Q03111 559 aaPredicted RBP8.8□□□□□ -1
CCDC50-203ENST00000460064 TBC1D8BQ0IIM8 1120 aa8.8□□□□□ -1
CCDC50-203ENST00000460064 TAF1CQ15572 869 aaPredicted RBP8.8□□□□□ -1
CCDC50-203ENST00000460064 HFE2Q6ZVN8 426 aa8.8□□□□□ -1
CCDC50-203ENST00000460064 UBE2OQ9C0C9 1292 aaKnown RBP8.8□□□□□ -1
CCDC50-203ENST00000460064 USP31Q70CQ4 1352 aa8.79□□□□□ -1
CCDC50-203ENST00000460064 ZBTB42B2RXF5 422 aa8.79□□□□□ -1
CCDC50-203ENST00000460064 J3QW42 95 aa8.79□□□□□ -1
CCDC50-203ENST00000460064 C2CD2LO14523 706 aa8.79□□□□□ -1
CCDC50-203ENST00000460064 TRPA1O75762 1119 aa8.79□□□□□ -1
CCDC50-203ENST00000460064 PCSK7Q16549 785 aa8.79□□□□□ -1
CCDC50-203ENST00000460064 CEP120Q8N960 986 aa8.79□□□□□ -1
CCDC50-203ENST00000460064 LIN7BQ9HAP6 207 aa8.79□□□□□ -1
CCDC50-203ENST00000460064 NXF1Q9UBU9 619 aaKnown RBP8.79□□□□□ -1
CCDC50-203ENST00000460064 HOXD8P13378 290 aaPredicted RBP8.78□□□□□ -1
CCDC50-203ENST00000460064 ACPPP15309 386 aa8.78□□□□□ -1
CCDC50-203ENST00000460064 GSTT1P30711 240 aa8.78□□□□□ -1
CCDC50-203ENST00000460064 FCGRTP55899 365 aa8.78□□□□□ -1
CCDC50-203ENST00000460064 PCBP4P57723 403 aaKnown RBP8.78□□□□□ -1
CCDC50-203ENST00000460064 MEI1Q5TIA1 1274 aa8.78□□□□□ -1
CCDC50-203ENST00000460064 ZNF468Q5VIY5 522 aaPredicted RBP8.78□□□□□ -1
CCDC50-203ENST00000460064 NT5DC4Q86YG4 428 aa8.78□□□□□ -1
CCDC50-203ENST00000460064 TRPM4Q8TD43 1214 aa8.78□□□□□ -1
CCDC50-203ENST00000460064 ZKSCAN3Q9BRR0 538 aa8.78□□□□□ -1
CCDC50-203ENST00000460064 GHRHP01286 108 aa8.77□□□□□ -1.01
CCDC50-203ENST00000460064 GPLD1P80108 840 aa8.77□□□□□ -1.01
CCDC50-203ENST00000460064 METTL16Q86W50 562 aaKnown RBP8.77□□□□□ -1.01
CCDC50-203ENST00000460064 GLIS3Q8NEA6 775 aa8.77□□□□□ -1.01
CCDC50-203ENST00000460064 DZANK1Q9NVP4 752 aa8.77□□□□□ -1.01
CCDC50-203ENST00000460064 DNAJB12Q9NXW2 375 aaKnown RBP8.77□□□□□ -1.01
CCDC50-203ENST00000460064 TMEM238LA0A1B0GVL6 79 aa8.76□□□□□ -1.01
CCDC50-203ENST00000460064 SIN3BO75182 1162 aa8.76□□□□□ -1.01
CCDC50-203ENST00000460064 DTHD1Q6ZMT9 781 aa8.76□□□□□ -1.01
CCDC50-203ENST00000460064 CNTNAP3BQ96NU0 1288 aa8.76□□□□□ -1.01
CCDC50-203ENST00000460064 TCF12Q99081 682 aa8.76□□□□□ -1.01
CCDC50-203ENST00000460064 CNTNAP3Q9BZ76 1288 aa8.76□□□□□ -1.01
CCDC50-203ENST00000460064 RBSNQ9H1K0 784 aa8.76□□□□□ -1.01
CCDC50-203ENST00000460064 AKAP2Q9Y2D5 859 aa8.76□□□□□ -1.01
CCDC50-203ENST00000460064 CCNJLQ8IV13 435 aa8.75□□□□□ -1.01
CCDC50-203ENST00000460064 GPR161Q8N6U8 529 aaKnown RBP8.75□□□□□ -1.01
CCDC50-203ENST00000460064 NSFL1CQ9UNZ2 370 aaKnown RBP8.75□□□□□ -1.01
CCDC50-203ENST00000460064 XRCC5P13010 732 aaKnown RBP8.74□□□□□ -1.01
CCDC50-203ENST00000460064 ST13P50502 369 aaKnown RBP8.74□□□□□ -1.01
CCDC50-203ENST00000460064 ZC3H6P61129 1189 aaKnown RBP8.74□□□□□ -1.01
CCDC50-203ENST00000460064 PRPF40BQ6NWY9 871 aaKnown RBP8.74□□□□□ -1.01
CCDC50-203ENST00000460064 HS2ST1Q7LGA3 356 aa8.74□□□□□ -1.01
CCDC50-203ENST00000460064 FAM35AQ86V20 835 aa8.74□□□□□ -1.01
CCDC50-203ENST00000460064 MICALL1Q8N3F8 863 aa8.74□□□□□ -1.01
CCDC50-203ENST00000460064 NXPE3Q969Y0 559 aa8.74□□□□□ -1.01
CCDC50-203ENST00000460064 OXCT2Q9BYC2 517 aaPredicted RBP8.74□□□□□ -1.01
CCDC50-203ENST00000460064 PBX4Q9BYU1 374 aa8.74□□□□□ -1.01
CCDC50-203ENST00000460064 RASSF4Q9H2L5 321 aa8.74□□□□□ -1.01
CCDC50-203ENST00000460064 AVENQ9NQS1 362 aaPredicted RBP8.74□□□□□ -1.01
CCDC50-203ENST00000460064 GGT7Q9UJ14 662 aa8.74□□□□□ -1.01
CCDC50-203ENST00000460064 TTF2Q9UNY4 1162 aaKnown RBP8.74□□□□□ -1.01
CCDC50-203ENST00000460064 NFKBIEO00221 500 aa8.73□□□□□ -1.01
CCDC50-203ENST00000460064 PDE2AO00408 941 aaPredicted RBP8.73□□□□□ -1.01
CCDC50-203ENST00000460064 CPB1P15086 417 aa8.73□□□□□ -1.01
CCDC50-203ENST00000460064 EIF2AK2P19525 551 aaKnown RBP8.73□□□□□ -1.01
CCDC50-203ENST00000460064 RAD51AP2Q09MP3 1159 aa8.73□□□□□ -1.01
CCDC50-203ENST00000460064 GAS6Q14393 721 aa8.73□□□□□ -1.01
CCDC50-203ENST00000460064 NPAS3Q8IXF0 933 aa8.73□□□□□ -1.01
CCDC50-203ENST00000460064 TMEM102Q8N9M5 508 aaPredicted RBP8.73□□□□□ -1.01
CCDC50-203ENST00000460064 C3orf58Q8NDZ4 430 aa8.73□□□□□ -1.01
CCDC50-203ENST00000460064 ASAP3Q8TDY4 903 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms