RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, human

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCSTN-209	ENST00000459963	RPTOR	Q8N122	1335 aa		11.18	□□□□□ -0.62
NCSTN-209	ENST00000459963	POLR2A	P24928	1970 aa	Known RBP	11.18	□□□□□ -0.62
NCSTN-209	ENST00000459963	SLC51A	Q86UW1	340 aa		11.18	□□□□□ -0.62
NCSTN-209	ENST00000459963	SYMPK	Q92797	1274 aa	Known RBP	11.18	□□□□□ -0.62
NCSTN-209	ENST00000459963	ECM2	O94769	699 aa	Predicted RBP	11.17	□□□□□ -0.62
NCSTN-209	ENST00000459963	MYC	P01106	439 aa	Predicted RBP	11.17	□□□□□ -0.62
NCSTN-209	ENST00000459963	EIF4A2	Q14240	407 aa	Known RBP	11.17	□□□□□ -0.62
NCSTN-209	ENST00000459963	CRY2	Q49AN0	593 aa		11.17	□□□□□ -0.62
NCSTN-209	ENST00000459963	MOB2	Q70IA6	237 aa		11.17	□□□□□ -0.62
NCSTN-209	ENST00000459963	NPM2	Q86SE8	214 aa	Known RBP	11.17	□□□□□ -0.62
NCSTN-209	ENST00000459963	DPF2	Q92785	391 aa		11.17	□□□□□ -0.62
NCSTN-209	ENST00000459963	STAP2	Q9UGK3	403 aa		11.17	□□□□□ -0.62
NCSTN-209	ENST00000459963	TMEM265	A0A087WTH1	108 aa		11.16	□□□□□ -0.62
NCSTN-209	ENST00000459963	PRAMEF22	A3QJZ6	481 aa		11.16	□□□□□ -0.62
NCSTN-209	ENST00000459963	RBM26	Q5T8P6	1007 aa	Known RBP	11.16	□□□□□ -0.62
NCSTN-209	ENST00000459963	CLEC4G	Q6UXB4	293 aa		11.16	□□□□□ -0.62
NCSTN-209	ENST00000459963	GGA3	Q9NZ52	723 aa		11.16	□□□□□ -0.62
NCSTN-209	ENST00000459963	SYNGAP1	Q96PV0	1343 aa		11.15	□□□□□ -0.62
NCSTN-209	ENST00000459963	EYS	Q5T1H1	3165 aa		11.15	□□□□□ -0.62
NCSTN-209	ENST00000459963		G3V3G9	751 aa		11.15	□□□□□ -0.62
NCSTN-209	ENST00000459963	UBE2Q2L	H0YL09	131 aa		11.15	□□□□□ -0.62
NCSTN-209	ENST00000459963	TCERG1	O14776	1098 aa	Known RBP	11.15	□□□□□ -0.62
NCSTN-209	ENST00000459963	PPEF1	O14829	653 aa	Predicted RBP	11.15	□□□□□ -0.62
NCSTN-209	ENST00000459963	MAP3K12	Q12852	859 aa		11.15	□□□□□ -0.62
NCSTN-209	ENST00000459963	LRIT3	Q3SXY7	679 aa		11.15	□□□□□ -0.62
NCSTN-209	ENST00000459963	DZIP3	Q86Y13	1208 aa	Known RBP	11.15	□□□□□ -0.62
NCSTN-209	ENST00000459963	SUPT20H	Q8NEM7	779 aa		11.15	□□□□□ -0.62
NCSTN-209	ENST00000459963	SHISA4	Q96DD7	197 aa		11.15	□□□□□ -0.62
NCSTN-209	ENST00000459963	PTCH2	Q9Y6C5	1203 aa		11.15	□□□□□ -0.62
NCSTN-209	ENST00000459963	KIF20B	Q96Q89	1820 aa		11.14	□□□□□ -0.63
NCSTN-209	ENST00000459963	FAM177B	A6PVY3	158 aa		11.14	□□□□□ -0.63
NCSTN-209	ENST00000459963	TNFRSF10A	O00220	468 aa		11.14	□□□□□ -0.63
NCSTN-209	ENST00000459963	HOXA10	P31260	410 aa	Predicted RBP	11.14	□□□□□ -0.63
NCSTN-209	ENST00000459963	CAP1	Q01518	475 aa		11.14	□□□□□ -0.63
NCSTN-209	ENST00000459963	C3orf67	Q6ZVT6	689 aa		11.14	□□□□□ -0.63
NCSTN-209	ENST00000459963	UBE2Q1	Q7Z7E8	422 aa		11.14	□□□□□ -0.63
NCSTN-209	ENST00000459963	RPGR	Q92834	1020 aa	Known RBP	11.14	□□□□□ -0.63
NCSTN-209	ENST00000459963	L3MBTL2	Q969R5	705 aa		11.14	□□□□□ -0.63
NCSTN-209	ENST00000459963	RNF25	Q96BH1	459 aa	Predicted RBP	11.14	□□□□□ -0.63
NCSTN-209	ENST00000459963	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.14	□□□□□ -0.63
NCSTN-209	ENST00000459963	KIF7	Q2M1P5	1343 aa		11.13	□□□□□ -0.63
NCSTN-209	ENST00000459963	YDJC	A8MPS7	323 aa		11.13	□□□□□ -0.63
NCSTN-209	ENST00000459963	BMP8B	P34820	402 aa		11.13	□□□□□ -0.63
NCSTN-209	ENST00000459963	KIAA2012	Q0VF49	1180 aa		11.13	□□□□□ -0.63
NCSTN-209	ENST00000459963	PDCD7	Q8N8D1	485 aa	Known RBP	11.13	□□□□□ -0.63
NCSTN-209	ENST00000459963	SLAIN1	Q8ND83	568 aa		11.13	□□□□□ -0.63
NCSTN-209	ENST00000459963	LGR6	Q9HBX8	967 aa		11.13	□□□□□ -0.63
NCSTN-209	ENST00000459963	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
NCSTN-209	ENST00000459963	ZNF652	Q9Y2D9	606 aa		11.13	□□□□□ -0.63
NCSTN-209	ENST00000459963	KDM3B	Q7LBC6	1761 aa		11.13	□□□□□ -0.63
NCSTN-209	ENST00000459963	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.12	□□□□□ -0.63
NCSTN-209	ENST00000459963	GTF2E1	P29083	439 aa	Predicted RBP	11.12	□□□□□ -0.63
NCSTN-209	ENST00000459963	KIF4B	Q2VIQ3	1234 aa		11.12	□□□□□ -0.63
NCSTN-209	ENST00000459963	ZFP91	Q96JP5	570 aa	Predicted RBP	11.12	□□□□□ -0.63
NCSTN-209	ENST00000459963	GUCD1	Q96NT3	240 aa		11.12	□□□□□ -0.63
NCSTN-209	ENST00000459963	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.12	□□□□□ -0.63
NCSTN-209	ENST00000459963	TMX4	Q9H1E5	349 aa	Predicted RBP	11.12	□□□□□ -0.63
NCSTN-209	ENST00000459963	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.12	□□□□□ -0.63
NCSTN-209	ENST00000459963	ASTN2	O75129	1339 aa	Predicted RBP	11.11	□□□□□ -0.63
NCSTN-209	ENST00000459963	RIC1	Q4ADV7	1423 aa		11.11	□□□□□ -0.63
NCSTN-209	ENST00000459963	BCAM	P50895	628 aa		11.11	□□□□□ -0.63
NCSTN-209	ENST00000459963	INHBE	P58166	350 aa		11.11	□□□□□ -0.63
NCSTN-209	ENST00000459963	SP3	Q02447	781 aa		11.11	□□□□□ -0.63
NCSTN-209	ENST00000459963	TCIRG1	Q13488	830 aa		11.11	□□□□□ -0.63
NCSTN-209	ENST00000459963	RBM17	Q96I25	401 aa	Known RBP	11.11	□□□□□ -0.63
NCSTN-209	ENST00000459963	CRAMP1	Q96RY5	1269 aa		11.11	□□□□□ -0.63
NCSTN-209	ENST00000459963	POLK	Q9UBT6	870 aa		11.11	□□□□□ -0.63
NCSTN-209	ENST00000459963	UBR2	Q8IWV8	1755 aa		11.11	□□□□□ -0.63
NCSTN-209	ENST00000459963	PSMD14	O00487	310 aa		11.1	□□□□□ -0.63
NCSTN-209	ENST00000459963	EVI5	O60447	810 aa		11.1	□□□□□ -0.63
NCSTN-209	ENST00000459963	A1BG	P04217	495 aa		11.1	□□□□□ -0.63
NCSTN-209	ENST00000459963	RPS12	P25398	132 aa	Known RBP	11.1	□□□□□ -0.63
NCSTN-209	ENST00000459963	TNNT2	P45379	298 aa	Predicted RBP	11.1	□□□□□ -0.63
NCSTN-209	ENST00000459963	TTLL12	Q14166	644 aa	Predicted RBP	11.1	□□□□□ -0.63
NCSTN-209	ENST00000459963	NKX2-3	Q8TAU0	364 aa		11.1	□□□□□ -0.63
NCSTN-209	ENST00000459963	SH3TC2	Q8TF17	1288 aa		11.1	□□□□□ -0.63
NCSTN-209	ENST00000459963	ZNF496	Q96IT1	587 aa	Predicted RBP	11.1	□□□□□ -0.63
NCSTN-209	ENST00000459963	GDF15	Q99988	308 aa		11.1	□□□□□ -0.63
NCSTN-209	ENST00000459963	ATP6V0A2	Q9Y487	856 aa		11.1	□□□□□ -0.63
NCSTN-209	ENST00000459963	ABCC12	Q96J65	1359 aa		11.1	□□□□□ -0.63
NCSTN-209	ENST00000459963	MANSC4	A6NHS7	340 aa	Predicted RBP	11.09	□□□□□ -0.63
NCSTN-209	ENST00000459963	RNMT	O43148	476 aa	Known RBP	11.09	□□□□□ -0.63
NCSTN-209	ENST00000459963	CRHR2	Q13324	411 aa		11.09	□□□□□ -0.63
NCSTN-209	ENST00000459963	ANGEL2	Q5VTE6	544 aa	Known RBP	11.09	□□□□□ -0.63
NCSTN-209	ENST00000459963	TTC5	Q8N0Z6	440 aa		11.09	□□□□□ -0.63
NCSTN-209	ENST00000459963	HEG1	Q9ULI3	1381 aa		11.08	□□□□□ -0.64
NCSTN-209	ENST00000459963	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
NCSTN-209	ENST00000459963	ARHGEF6	Q15052	776 aa		11.08	□□□□□ -0.64
NCSTN-209	ENST00000459963	SPRYD7	Q5W111	196 aa		11.08	□□□□□ -0.64
NCSTN-209	ENST00000459963	DPP8	Q6V1X1	898 aa	Predicted RBP	11.08	□□□□□ -0.64
NCSTN-209	ENST00000459963	AEBP1	Q8IUX7	1158 aa		11.08	□□□□□ -0.64
NCSTN-209	ENST00000459963	EFCAB3	Q8N7B9	438 aa		11.08	□□□□□ -0.64
NCSTN-209	ENST00000459963	CARD11	Q9BXL7	1154 aa		11.08	□□□□□ -0.64
NCSTN-209	ENST00000459963	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.08	□□□□□ -0.64
NCSTN-209	ENST00000459963	IRS2	Q9Y4H2	1338 aa		11.08	□□□□□ -0.64
NCSTN-209	ENST00000459963	PRUNE2	Q8WUY3	3088 aa		11.07	□□□□□ -0.64
NCSTN-209	ENST00000459963	RGL2	O15211	777 aa		11.07	□□□□□ -0.64
NCSTN-209	ENST00000459963	PTPN12	Q05209	780 aa	Known RBP	11.07	□□□□□ -0.64
NCSTN-209	ENST00000459963	SCARF1	Q14162	830 aa		11.07	□□□□□ -0.64
NCSTN-209	ENST00000459963	NUTM1	Q86Y26	1132 aa		11.07	□□□□□ -0.64

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