RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 BRPF1P55201 1214 aaPredicted RBP15.99■□□□□ 0.15
GPNMB-204ENST00000459927 ZIC5Q96T25 663 aa15.99■□□□□ 0.15
GPNMB-204ENST00000459927 HSP90B1P14625 803 aaKnown RBP15.98■□□□□ 0.15
GPNMB-204ENST00000459927 GNAI1P63096 354 aa15.98■□□□□ 0.15
GPNMB-204ENST00000459927 KRT26Q7Z3Y9 468 aa15.98■□□□□ 0.15
GPNMB-204ENST00000459927 JARID2Q92833 1246 aaPredicted RBP15.98■□□□□ 0.15
GPNMB-204ENST00000459927 DCPSQ96C86 337 aaKnown RBP15.98■□□□□ 0.15
GPNMB-204ENST00000459927 MYD88Q99836 296 aa15.98■□□□□ 0.15
GPNMB-204ENST00000459927 IFT57Q9NWB7 429 aa15.98■□□□□ 0.15
GPNMB-204ENST00000459927 CCDC85CA6NKD9 419 aa15.97■□□□□ 0.15
GPNMB-204ENST00000459927 PCCAP05165 728 aaPredicted RBP15.97■□□□□ 0.15
GPNMB-204ENST00000459927 HUNKP57058 714 aa15.97■□□□□ 0.15
GPNMB-204ENST00000459927 GOLGA2Q08379 1002 aa15.97■□□□□ 0.15
GPNMB-204ENST00000459927 C8orf58Q8NAV2 365 aa15.97■□□□□ 0.15
GPNMB-204ENST00000459927 CCDC191Q8NCU4 936 aa15.97■□□□□ 0.15
GPNMB-204ENST00000459927 PRKRIP1Q9H875 184 aaPredicted RBP15.97■□□□□ 0.15
GPNMB-204ENST00000459927 RTL9Q8NET4 1388 aa15.97■□□□□ 0.15
GPNMB-204ENST00000459927 DDX60Q8IY21 1712 aaKnown RBP15.97■□□□□ 0.15
GPNMB-204ENST00000459927 DUOX1Q9NRD9 1551 aa15.96■□□□□ 0.15
GPNMB-204ENST00000459927 PDE8AO60658 829 aa15.96■□□□□ 0.15
GPNMB-204ENST00000459927 RGS19P49795 217 aa15.96■□□□□ 0.15
GPNMB-204ENST00000459927 NOGQ13253 232 aa15.96■□□□□ 0.15
GPNMB-204ENST00000459927 C2orf69Q8N8R5 385 aa15.96■□□□□ 0.15
GPNMB-204ENST00000459927 ANKIB1Q9P2G1 1089 aa15.96■□□□□ 0.15
GPNMB-204ENST00000459927 G3V3G9 751 aa15.95■□□□□ 0.14
GPNMB-204ENST00000459927 CALD1Q05682 793 aaKnown RBP15.95■□□□□ 0.14
GPNMB-204ENST00000459927 CCDC152Q4G0S7 254 aa15.95■□□□□ 0.14
GPNMB-204ENST00000459927 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
GPNMB-204ENST00000459927 RGMBQ6NW40 437 aa15.95■□□□□ 0.14
GPNMB-204ENST00000459927 CCDC102AQ96A19 550 aa15.95■□□□□ 0.14
GPNMB-204ENST00000459927 METTL22Q9BUU2 404 aaPredicted RBP15.95■□□□□ 0.14
GPNMB-204ENST00000459927 GBA2Q9HCG7 927 aaPredicted RBP15.95■□□□□ 0.14
GPNMB-204ENST00000459927 GGA1Q9UJY5 639 aa15.95■□□□□ 0.14
GPNMB-204ENST00000459927 CASP8AP2Q9UKL3 1982 aa15.95■□□□□ 0.14
GPNMB-204ENST00000459927 FAM155AB1AL88 458 aaPredicted RBP15.94■□□□□ 0.14
GPNMB-204ENST00000459927 CHMP4AQ9BY43 222 aa15.94■□□□□ 0.14
GPNMB-204ENST00000459927 CWC25Q9NXE8 425 aaPredicted RBP15.94■□□□□ 0.14
GPNMB-204ENST00000459927 COL4A1P02462 1669 aa15.94■□□□□ 0.14
GPNMB-204ENST00000459927 THSD7BQ9C0I4 1608 aa15.94■□□□□ 0.14
GPNMB-204ENST00000459927 ADM5C9JUS6 153 aa15.93■□□□□ 0.14
GPNMB-204ENST00000459927 UFL1O94874 794 aa15.93■□□□□ 0.14
GPNMB-204ENST00000459927 SCARF1Q14162 830 aa15.93■□□□□ 0.14
GPNMB-204ENST00000459927 CCDC30Q5VVM6 783 aa15.93■□□□□ 0.14
GPNMB-204ENST00000459927 AGBL3Q8NEM8 1001 aa15.93■□□□□ 0.14
GPNMB-204ENST00000459927 CCDC85AQ96PX6 553 aaPredicted RBP15.93■□□□□ 0.14
GPNMB-204ENST00000459927 MCOLN1Q9GZU1 580 aa15.93■□□□□ 0.14
GPNMB-204ENST00000459927 LRRC37AA6NMS7 1700 aa15.93■□□□□ 0.14
GPNMB-204ENST00000459927 DDX58O95786 925 aaKnown RBP15.92■□□□□ 0.14
GPNMB-204ENST00000459927 ZNF157P51786 506 aaPredicted RBP15.92■□□□□ 0.14
GPNMB-204ENST00000459927 ZNF280AP59817 542 aaPredicted RBP15.92■□□□□ 0.14
GPNMB-204ENST00000459927 KIF23Q02241 960 aaPredicted RBP15.92■□□□□ 0.14
GPNMB-204ENST00000459927 KIF4BQ2VIQ3 1234 aa15.92■□□□□ 0.14
GPNMB-204ENST00000459927 RSBN1LQ6PCB5 846 aaPredicted RBP15.92■□□□□ 0.14
GPNMB-204ENST00000459927 KSR2Q6VAB6 950 aa15.92■□□□□ 0.14
GPNMB-204ENST00000459927 ANKRD18AQ8IVF6 992 aa15.92■□□□□ 0.14
GPNMB-204ENST00000459927 SULF1Q8IWU6 871 aa15.92■□□□□ 0.14
GPNMB-204ENST00000459927 ASTN2O75129 1339 aaPredicted RBP15.92■□□□□ 0.14
GPNMB-204ENST00000459927 WTIPA6NIX2 430 aaPredicted RBP15.91■□□□□ 0.14
GPNMB-204ENST00000459927 ATP2B4P23634 1241 aa15.91■□□□□ 0.14
GPNMB-204ENST00000459927 FAM161AQ3B820 660 aa15.91■□□□□ 0.14
GPNMB-204ENST00000459927 PODNQ7Z5L7 613 aa15.91■□□□□ 0.14
GPNMB-204ENST00000459927 TSPYL6Q8N831 410 aa15.91■□□□□ 0.14
GPNMB-204ENST00000459927 GMLQ99445 158 aa15.91■□□□□ 0.14
GPNMB-204ENST00000459927 MAP3K2Q9Y2U5 619 aa15.91■□□□□ 0.14
GPNMB-204ENST00000459927 IGKV5-2P06315 115 aa15.9■□□□□ 0.14
GPNMB-204ENST00000459927 MLLT1Q03111 559 aaPredicted RBP15.9■□□□□ 0.14
GPNMB-204ENST00000459927 DGKZQ13574 1117 aa15.9■□□□□ 0.14
GPNMB-204ENST00000459927 TTLL11Q8NHH1 800 aa15.9■□□□□ 0.14
GPNMB-204ENST00000459927 CSRNP1Q96S65 589 aa15.9■□□□□ 0.14
GPNMB-204ENST00000459927 RNF186Q9NXI6 227 aa15.9■□□□□ 0.14
GPNMB-204ENST00000459927 PI4KAP2A4QPH2 592 aa15.89■□□□□ 0.13
GPNMB-204ENST00000459927 USP17L3A6NCW0 530 aa15.89■□□□□ 0.13
GPNMB-204ENST00000459927 USP17L4A6NCW7 530 aa15.89■□□□□ 0.13
GPNMB-204ENST00000459927 USP17L8P0C7I0 530 aa15.89■□□□□ 0.13
GPNMB-204ENST00000459927 ANGEL2Q5VTE6 544 aaKnown RBP15.89■□□□□ 0.13
GPNMB-204ENST00000459927 USP17L1Q7RTZ2 530 aa15.89■□□□□ 0.13
GPNMB-204ENST00000459927 PI4KAP1Q8N8J0 262 aa15.89■□□□□ 0.13
GPNMB-204ENST00000459927 BSDC1Q9NW68 430 aaPredicted RBP15.89■□□□□ 0.13
GPNMB-204ENST00000459927 GGA3Q9NZ52 723 aa15.89■□□□□ 0.13
GPNMB-204ENST00000459927 MINPP1Q9UNW1 487 aa15.89■□□□□ 0.13
GPNMB-204ENST00000459927 SCN9AQ15858 1988 aa15.89■□□□□ 0.13
GPNMB-204ENST00000459927 XDHP47989 1333 aa15.89■□□□□ 0.13
GPNMB-204ENST00000459927 TRPA1O75762 1119 aa15.88■□□□□ 0.13
GPNMB-204ENST00000459927 CDCA5Q96FF9 252 aa15.88■□□□□ 0.13
GPNMB-204ENST00000459927 MYOZ2Q9NPC6 264 aa15.88■□□□□ 0.13
GPNMB-204ENST00000459927 H7C1W4 665 aa15.87■□□□□ 0.13
GPNMB-204ENST00000459927 CDC5LQ99459 802 aaKnown RBP15.87■□□□□ 0.13
GPNMB-204ENST00000459927 SAGE1Q9NXZ1 904 aa15.87■□□□□ 0.13
GPNMB-204ENST00000459927 SLC10A3P09131 477 aa15.86■□□□□ 0.13
GPNMB-204ENST00000459927 CTSWP56202 376 aa15.86■□□□□ 0.13
GPNMB-204ENST00000459927 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
GPNMB-204ENST00000459927 GREM2Q9H772 168 aa15.86■□□□□ 0.13
GPNMB-204ENST00000459927 SLC4A2P04920 1241 aa15.85■□□□□ 0.13
GPNMB-204ENST00000459927 CCT4P50991 539 aaKnown RBP15.85■□□□□ 0.13
GPNMB-204ENST00000459927 FKBP1BP68106 108 aa15.85■□□□□ 0.13
GPNMB-204ENST00000459927 NEXNQ0ZGT2 675 aa15.85■□□□□ 0.13
GPNMB-204ENST00000459927 CWF19L2Q2TBE0 894 aaKnown RBP15.85■□□□□ 0.13
GPNMB-204ENST00000459927 G2E3Q7L622 706 aa15.85■□□□□ 0.13
GPNMB-204ENST00000459927 NEURL1BA8MQ27 555 aa15.84■□□□□ 0.13
GPNMB-204ENST00000459927 NBPF9Q3BBW0 867 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms