RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, human

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA3C-205	ENST00000458729	MVP	Q14764	893 aa	Known RBP	32.3	■■■□□ 2.76
SEMA3C-205	ENST00000458729	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.3	■■■□□ 2.76
SEMA3C-205	ENST00000458729	LDHAL6A	Q6ZMR3	332 aa		32.29	■■■□□ 2.76
SEMA3C-205	ENST00000458729	ZNF594	Q96JF6	807 aa	Predicted RBP	32.29	■■■□□ 2.76
SEMA3C-205	ENST00000458729	DDX19B	Q9UMR2	479 aa		32.29	■■■□□ 2.76
SEMA3C-205	ENST00000458729	XDH	P47989	1333 aa		32.29	■■■□□ 2.76
SEMA3C-205	ENST00000458729	ANKRD2	Q9GZV1	360 aa		32.28	■■■□□ 2.76
SEMA3C-205	ENST00000458729	CHMP4B	Q9H444	224 aa	Known RBP	32.28	■■■□□ 2.76
SEMA3C-205	ENST00000458729	COG6	Q9Y2V7	657 aa		32.28	■■■□□ 2.76
SEMA3C-205	ENST00000458729	CCDC88A	Q3V6T2	1871 aa		32.28	■■■□□ 2.76
SEMA3C-205	ENST00000458729	RRP1	P56182	461 aa	Known RBP	32.27	■■■□□ 2.76
SEMA3C-205	ENST00000458729	GGA1	Q9UJY5	639 aa		32.27	■■■□□ 2.76
SEMA3C-205	ENST00000458729	C6orf229	H3BNL8	230 aa		32.26	■■■□□ 2.76
SEMA3C-205	ENST00000458729	TBC1D16	Q8TBP0	767 aa		32.26	■■■□□ 2.76
SEMA3C-205	ENST00000458729	EYA3	Q99504	573 aa		32.26	■■■□□ 2.76
SEMA3C-205	ENST00000458729	CNNM1	Q9NRU3	951 aa		32.26	■■■□□ 2.76
SEMA3C-205	ENST00000458729	POLL	Q9UGP5	575 aa		32.26	■■■□□ 2.76
SEMA3C-205	ENST00000458729	SPEF2	Q9C093	1822 aa		32.26	■■■□□ 2.76
SEMA3C-205	ENST00000458729	ATP2B4	P23634	1241 aa		32.26	■■■□□ 2.75
SEMA3C-205	ENST00000458729	MTX1	Q13505	466 aa		32.26	■■■□□ 2.75
SEMA3C-205	ENST00000458729	PPIP5K2	O43314	1243 aa		32.25	■■■□□ 2.75
SEMA3C-205	ENST00000458729	C20orf194	Q5TEA3	1177 aa		32.25	■■■□□ 2.75
SEMA3C-205	ENST00000458729	LARGE2	Q8N3Y3	721 aa		32.25	■■■□□ 2.75
SEMA3C-205	ENST00000458729	JDP2	Q8WYK2	163 aa		32.25	■■■□□ 2.75
SEMA3C-205	ENST00000458729	DICER1	Q9UPY3	1922 aa	Known RBP	32.24	■■■□□ 2.75
SEMA3C-205	ENST00000458729	UFL1	O94874	794 aa		32.24	■■■□□ 2.75
SEMA3C-205	ENST00000458729	RFX5	P48382	616 aa	Predicted RBP	32.24	■■■□□ 2.75
SEMA3C-205	ENST00000458729	CHRND	Q07001	517 aa		32.24	■■■□□ 2.75
SEMA3C-205	ENST00000458729	KIAA2012	Q0VF49	1180 aa		32.24	■■■□□ 2.75
SEMA3C-205	ENST00000458729	LTBP1	Q14766	1721 aa		32.23	■■■□□ 2.75
SEMA3C-205	ENST00000458729	WASHC4	Q2M389	1173 aa		32.23	■■■□□ 2.75
SEMA3C-205	ENST00000458729	DUOX1	Q9NRD9	1551 aa		32.23	■■■□□ 2.75
SEMA3C-205	ENST00000458729	LEMD3	Q9Y2U8	911 aa		32.23	■■■□□ 2.75
SEMA3C-205	ENST00000458729	AOC3	Q16853	763 aa		32.22	■■■□□ 2.75
SEMA3C-205	ENST00000458729	SRGAP3	O43295	1099 aa		32.21	■■■□□ 2.75
SEMA3C-205	ENST00000458729	PTPN12	Q05209	780 aa	Known RBP	32.21	■■■□□ 2.75
SEMA3C-205	ENST00000458729	PUS3	Q9BZE2	481 aa	Known RBP	32.21	■■■□□ 2.75
SEMA3C-205	ENST00000458729	FBXO3	Q9UK99	471 aa		32.21	■■■□□ 2.75
SEMA3C-205	ENST00000458729	RIPOR2	Q9Y4F9	1068 aa		32.21	■■■□□ 2.75
SEMA3C-205	ENST00000458729	NIM1K	Q8IY84	436 aa		32.2	■■■□□ 2.74
SEMA3C-205	ENST00000458729	KLHDC4	Q8TBB5	520 aa		32.2	■■■□□ 2.74
SEMA3C-205	ENST00000458729	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.2	■■■□□ 2.74
SEMA3C-205	ENST00000458729	MROH5	Q6ZUA9	1318 aa		32.19	■■■□□ 2.74
SEMA3C-205	ENST00000458729	C1orf115	Q9H7X2	142 aa		32.18	■■■□□ 2.74
SEMA3C-205	ENST00000458729	COPRS	Q9NQ92	184 aa		32.18	■■■□□ 2.74
SEMA3C-205	ENST00000458729	EYA2	O00167	538 aa		32.17	■■■□□ 2.74
SEMA3C-205	ENST00000458729	KCNJ4	P48050	445 aa		32.17	■■■□□ 2.74
SEMA3C-205	ENST00000458729	ATP8B2	P98198	1209 aa		32.17	■■■□□ 2.74
SEMA3C-205	ENST00000458729	LRRC24	Q50LG9	513 aa		32.17	■■■□□ 2.74
SEMA3C-205	ENST00000458729	DPY19L2	Q6NUT2	758 aa		32.17	■■■□□ 2.74
SEMA3C-205	ENST00000458729	ZBTB40	Q9NUA8	1239 aa		32.17	■■■□□ 2.74
SEMA3C-205	ENST00000458729	ZNF804B	A4D1E1	1349 aa		32.17	■■■□□ 2.74
SEMA3C-205	ENST00000458729	TIAM2	Q8IVF5	1701 aa		32.16	■■■□□ 2.74
SEMA3C-205	ENST00000458729	FZD9	O00144	591 aa		32.16	■■■□□ 2.74
SEMA3C-205	ENST00000458729	RIMBP2	O15034	1052 aa		32.16	■■■□□ 2.74
SEMA3C-205	ENST00000458729	HELB	Q8NG08	1087 aa	Predicted RBP	32.16	■■■□□ 2.74
SEMA3C-205	ENST00000458729	TAF5L	O75529	589 aa		32.15	■■■□□ 2.74
SEMA3C-205	ENST00000458729	PNMA6E	A0A0J9YXQ4	647 aa		32.14	■■■□□ 2.74
SEMA3C-205	ENST00000458729	CIAO1	O76071	339 aa		32.14	■■■□□ 2.74
SEMA3C-205	ENST00000458729	METTL24	Q5JXM2	366 aa		32.14	■■■□□ 2.74
SEMA3C-205	ENST00000458729	GPR101	Q96P66	508 aa	Predicted RBP	32.14	■■■□□ 2.74
SEMA3C-205	ENST00000458729	ZNRF3	Q9ULT6	936 aa		32.14	■■■□□ 2.74
SEMA3C-205	ENST00000458729	MED23	Q9ULK4	1368 aa		32.13	■■■□□ 2.73
SEMA3C-205	ENST00000458729	GLTPD2	A6NH11	291 aa		32.13	■■■□□ 2.73
SEMA3C-205	ENST00000458729	EIF6	P56537	245 aa	Known RBP	32.13	■■■□□ 2.73
SEMA3C-205	ENST00000458729	KDM2B	Q8NHM5	1336 aa		32.12	■■■□□ 2.73
SEMA3C-205	ENST00000458729	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.12	■■■□□ 2.73
SEMA3C-205	ENST00000458729	SIL1	Q9H173	461 aa		32.12	■■■□□ 2.73
SEMA3C-205	ENST00000458729	PA2G4	Q9UQ80	394 aa	Known RBP	32.12	■■■□□ 2.73
SEMA3C-205	ENST00000458729	COL4A5	P29400	1685 aa		32.12	■■■□□ 2.73
SEMA3C-205	ENST00000458729	WTIP	A6NIX2	430 aa	Predicted RBP	32.11	■■■□□ 2.73
SEMA3C-205	ENST00000458729		G3V3G9	751 aa		32.11	■■■□□ 2.73
SEMA3C-205	ENST00000458729	UBE4A	Q14139	1066 aa		32.11	■■■□□ 2.73
SEMA3C-205	ENST00000458729	POLA2	Q14181	598 aa		32.11	■■■□□ 2.73
SEMA3C-205	ENST00000458729	DCAF8	Q5TAQ9	597 aa		32.11	■■■□□ 2.73
SEMA3C-205	ENST00000458729	SSH3	Q8TE77	659 aa		32.11	■■■□□ 2.73
SEMA3C-205	ENST00000458729	IL15	P40933	162 aa	Predicted RBP	32.1	■■■□□ 2.73
SEMA3C-205	ENST00000458729	CEP85	Q6P2H3	762 aa		32.1	■■■□□ 2.73
SEMA3C-205	ENST00000458729	ATG9A	Q7Z3C6	839 aa		32.1	■■■□□ 2.73
SEMA3C-205	ENST00000458729	PDE8B	O95263	885 aa		32.09	■■■□□ 2.73
SEMA3C-205	ENST00000458729	C15orf52	Q6ZUT6	534 aa	Known RBP	32.09	■■■□□ 2.73
SEMA3C-205	ENST00000458729	RPAP2	Q8IXW5	612 aa	Predicted RBP	32.09	■■■□□ 2.73
SEMA3C-205	ENST00000458729	VGLL2	Q8N8G2	317 aa		32.08	■■■□□ 2.73
SEMA3C-205	ENST00000458729	DBNDD1	Q9H9R9	158 aa		32.08	■■■□□ 2.73
SEMA3C-205	ENST00000458729	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.08	■■■□□ 2.73
SEMA3C-205	ENST00000458729		A0A1B0GUL6	1792 aa		32.08	■■■□□ 2.73
SEMA3C-205	ENST00000458729	ZNF541	Q9H0D2	1346 aa		32.08	■■■□□ 2.73
SEMA3C-205	ENST00000458729	ECE2	O60344	883 aa		32.07	■■■□□ 2.72
SEMA3C-205	ENST00000458729	DOK7	Q18PE1	504 aa		32.07	■■■□□ 2.72
SEMA3C-205	ENST00000458729	ZNF526	Q8TF50	670 aa	Predicted RBP	32.07	■■■□□ 2.72
SEMA3C-205	ENST00000458729	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.07	■■■□□ 2.72
SEMA3C-205	ENST00000458729	CEP126	Q9P2H0	1117 aa		32.07	■■■□□ 2.72
SEMA3C-205	ENST00000458729	SNAP23	O00161	211 aa		32.06	■■■□□ 2.72
SEMA3C-205	ENST00000458729	G3BP1	Q13283	466 aa	Known RBP eCLIP	32.05	■■■□□ 2.72
SEMA3C-205	ENST00000458729	PODN	Q7Z5L7	613 aa		32.05	■■■□□ 2.72
SEMA3C-205	ENST00000458729	GPC2	Q8N158	579 aa		32.05	■■■□□ 2.72
SEMA3C-205	ENST00000458729	COA1	Q9GZY4	146 aa		32.05	■■■□□ 2.72
SEMA3C-205	ENST00000458729	DDN	O94850	711 aa	Predicted RBP	32.04	■■■□□ 2.72
SEMA3C-205	ENST00000458729	TXNRD3	Q86VQ6	643 aa		32.04	■■■□□ 2.72
SEMA3C-205	ENST00000458729	YDJC	A8MPS7	323 aa		32.03	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms