RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TSR2Q969E8 191 aaKnown RBP20.29■□□□□ 0.84
CHCHD3-204ENST00000457942 PGAP2Q9UHJ9 254 aa20.29■□□□□ 0.84
CHCHD3-204ENST00000457942 ZNF316A6NFI3 1004 aaPredicted RBP20.28■□□□□ 0.84
CHCHD3-204ENST00000457942 IRS4O14654 1257 aaPredicted RBP20.28■□□□□ 0.84
CHCHD3-204ENST00000457942 VPS33BQ9H267 617 aa20.28■□□□□ 0.84
CHCHD3-204ENST00000457942 LRRC37AA6NMS7 1700 aa20.27■□□□□ 0.84
CHCHD3-204ENST00000457942 H7C1D1 291 aa20.27■□□□□ 0.84
CHCHD3-204ENST00000457942 EGFRP00533 1210 aa20.27■□□□□ 0.84
CHCHD3-204ENST00000457942 RBM26Q5T8P6 1007 aaKnown RBP20.27■□□□□ 0.84
CHCHD3-204ENST00000457942 ZC3H15Q8WU90 426 aaKnown RBP20.27■□□□□ 0.84
CHCHD3-204ENST00000457942 DBNDD1Q9H9R9 158 aa20.27■□□□□ 0.84
CHCHD3-204ENST00000457942 HSP90B1P14625 803 aaKnown RBP20.26■□□□□ 0.83
CHCHD3-204ENST00000457942 TRIM28Q13263 835 aaKnown RBP20.26■□□□□ 0.83
CHCHD3-204ENST00000457942 KRT26Q7Z3Y9 468 aa20.26■□□□□ 0.83
CHCHD3-204ENST00000457942 STK31Q9BXU1 1019 aa20.26■□□□□ 0.83
CHCHD3-204ENST00000457942 COL4A1P02462 1669 aa20.26■□□□□ 0.83
CHCHD3-204ENST00000457942 PSMD14O00487 310 aa20.25■□□□□ 0.83
CHCHD3-204ENST00000457942 RIMBP2O15034 1052 aa20.25■□□□□ 0.83
CHCHD3-204ENST00000457942 SF3B3Q15393 1217 aaKnown RBP20.25■□□□□ 0.83
CHCHD3-204ENST00000457942 WWC1Q8IX03 1113 aa20.25■□□□□ 0.83
CHCHD3-204ENST00000457942 TSPYL6Q8N831 410 aa20.25■□□□□ 0.83
CHCHD3-204ENST00000457942 ZBTB38Q8NAP3 1195 aaPredicted RBP20.25■□□□□ 0.83
CHCHD3-204ENST00000457942 CELF1Q92879 486 aaKnown RBP20.25■□□□□ 0.83
CHCHD3-204ENST00000457942 GBA2Q9HCG7 927 aaPredicted RBP20.25■□□□□ 0.83
CHCHD3-204ENST00000457942 FAM155AB1AL88 458 aaPredicted RBP20.24■□□□□ 0.83
CHCHD3-204ENST00000457942 KIF23Q02241 960 aaPredicted RBP20.24■□□□□ 0.83
CHCHD3-204ENST00000457942 CCDC27Q2M243 656 aa20.24■□□□□ 0.83
CHCHD3-204ENST00000457942 RGMBQ6NW40 437 aa20.24■□□□□ 0.83
CHCHD3-204ENST00000457942 CWC25Q9NXE8 425 aaPredicted RBP20.24■□□□□ 0.83
CHCHD3-204ENST00000457942 NSFL1CQ9UNZ2 370 aaKnown RBP20.24■□□□□ 0.83
CHCHD3-204ENST00000457942 TRPA1O75762 1119 aa20.23■□□□□ 0.83
CHCHD3-204ENST00000457942 ZNF157P51786 506 aaPredicted RBP20.23■□□□□ 0.83
CHCHD3-204ENST00000457942 CCDC191Q8NCU4 936 aa20.23■□□□□ 0.83
CHCHD3-204ENST00000457942 METTL22Q9BUU2 404 aaPredicted RBP20.23■□□□□ 0.83
CHCHD3-204ENST00000457942 PCDH10Q9P2E7 1040 aa20.23■□□□□ 0.83
CHCHD3-204ENST00000457942 MAP3K2Q9Y2U5 619 aa20.23■□□□□ 0.83
CHCHD3-204ENST00000457942 SALL2Q9Y467 1007 aaPredicted RBP20.23■□□□□ 0.83
CHCHD3-204ENST00000457942 C6orf229H3BNL8 230 aa20.22■□□□□ 0.83
CHCHD3-204ENST00000457942 TWISTNBQ3B726 338 aaPredicted RBP20.22■□□□□ 0.83
CHCHD3-204ENST00000457942 C2orf69Q8N8R5 385 aa20.22■□□□□ 0.83
CHCHD3-204ENST00000457942 PCCAP05165 728 aaPredicted RBP20.21■□□□□ 0.83
CHCHD3-204ENST00000457942 NEXNQ0ZGT2 675 aa20.21■□□□□ 0.83
CHCHD3-204ENST00000457942 DOK7Q18PE1 504 aa20.21■□□□□ 0.83
CHCHD3-204ENST00000457942 JARID2Q92833 1246 aaPredicted RBP20.21■□□□□ 0.83
CHCHD3-204ENST00000457942 CCDC85AQ96PX6 553 aaPredicted RBP20.21■□□□□ 0.83
CHCHD3-204ENST00000457942 KCNQ5Q9NR82 932 aa20.21■□□□□ 0.83
CHCHD3-204ENST00000457942 RNF186Q9NXI6 227 aa20.21■□□□□ 0.83
CHCHD3-204ENST00000457942 ASTN2O75129 1339 aaPredicted RBP20.21■□□□□ 0.83
CHCHD3-204ENST00000457942 PDE4DIPQ5VU43 2346 aa20.2■□□□□ 0.82
CHCHD3-204ENST00000457942 RPS8P62241 208 aaKnown RBP20.2■□□□□ 0.82
CHCHD3-204ENST00000457942 WASHC4Q2M389 1173 aa20.2■□□□□ 0.82
CHCHD3-204ENST00000457942 CCDC152Q4G0S7 254 aa20.2■□□□□ 0.82
CHCHD3-204ENST00000457942 DCPSQ96C86 337 aaKnown RBP20.2■□□□□ 0.82
CHCHD3-204ENST00000457942 GGA3Q9NZ52 723 aa20.2■□□□□ 0.82
CHCHD3-204ENST00000457942 IL16Q14005 1332 aa20.2■□□□□ 0.82
CHCHD3-204ENST00000457942 RTL9Q8NET4 1388 aa20.2■□□□□ 0.82
CHCHD3-204ENST00000457942 PI4KAP2A4QPH2 592 aa20.19■□□□□ 0.82
CHCHD3-204ENST00000457942 ECE2O60344 883 aa20.19■□□□□ 0.82
CHCHD3-204ENST00000457942 GPSM2P81274 684 aa20.19■□□□□ 0.82
CHCHD3-204ENST00000457942 KSR2Q6VAB6 950 aa20.19■□□□□ 0.82
CHCHD3-204ENST00000457942 PI4KAP1Q8N8J0 262 aa20.19■□□□□ 0.82
CHCHD3-204ENST00000457942 EYA3Q99504 573 aa20.19■□□□□ 0.82
CHCHD3-204ENST00000457942 SEC31BQ9NQW1 1179 aa20.19■□□□□ 0.82
CHCHD3-204ENST00000457942 MYH3P11055 1940 aa20.18■□□□□ 0.82
CHCHD3-204ENST00000457942 PDE8AO60658 829 aa20.18■□□□□ 0.82
CHCHD3-204ENST00000457942 KIF4BQ2VIQ3 1234 aa20.18■□□□□ 0.82
CHCHD3-204ENST00000457942 SAGE1Q9NXZ1 904 aa20.18■□□□□ 0.82
CHCHD3-204ENST00000457942 ANKIB1Q9P2G1 1089 aa20.18■□□□□ 0.82
CHCHD3-204ENST00000457942 DPF2Q92785 391 aa20.17■□□□□ 0.82
CHCHD3-204ENST00000457942 CCDC102AQ96A19 550 aa20.17■□□□□ 0.82
CHCHD3-204ENST00000457942 FANCIQ9NVI1 1328 aa20.17■□□□□ 0.82
CHCHD3-204ENST00000457942 SPEF2Q9C093 1822 aa20.16■□□□□ 0.82
CHCHD3-204ENST00000457942 AKAP11Q9UKA4 1901 aa20.16■□□□□ 0.82
CHCHD3-204ENST00000457942 G3V3G9 751 aa20.16■□□□□ 0.82
CHCHD3-204ENST00000457942 SLC4A2P04920 1241 aa20.16■□□□□ 0.82
CHCHD3-204ENST00000457942 SLC10A3P09131 477 aa20.16■□□□□ 0.82
CHCHD3-204ENST00000457942 DCAF8Q5TAQ9 597 aa20.16■□□□□ 0.82
CHCHD3-204ENST00000457942 POLLQ9UGP5 575 aa20.16■□□□□ 0.82
CHCHD3-204ENST00000457942 POLR2AP24928 1970 aaKnown RBP20.15■□□□□ 0.82
CHCHD3-204ENST00000457942 UFL1O94874 794 aa20.15■□□□□ 0.82
CHCHD3-204ENST00000457942 SULF1Q8IWU6 871 aa20.15■□□□□ 0.82
CHCHD3-204ENST00000457942 FAM9BQ8IZU0 186 aa20.15■□□□□ 0.82
CHCHD3-204ENST00000457942 TBC1D16Q8TBP0 767 aa20.15■□□□□ 0.82
CHCHD3-204ENST00000457942 CDCA5Q96FF9 252 aa20.15■□□□□ 0.82
CHCHD3-204ENST00000457942 SCAF8Q9UPN6 1271 aaKnown RBP20.15■□□□□ 0.82
CHCHD3-204ENST00000457942 CACNA1FO60840 1977 aa20.14■□□□□ 0.81
CHCHD3-204ENST00000457942 SCN9AQ15858 1988 aa20.14■□□□□ 0.81
CHCHD3-204ENST00000457942 IGKV5-2P06315 115 aa20.14■□□□□ 0.81
CHCHD3-204ENST00000457942 CWF19L2Q2TBE0 894 aaKnown RBP20.14■□□□□ 0.81
CHCHD3-204ENST00000457942 NCBP3Q53F19 620 aaKnown RBP20.14■□□□□ 0.81
CHCHD3-204ENST00000457942 G2E3Q7L622 706 aa20.14■□□□□ 0.81
CHCHD3-204ENST00000457942 CTU1Q7Z7A3 348 aaKnown RBP20.14■□□□□ 0.81
CHCHD3-204ENST00000457942 ANKRD18AQ8IVF6 992 aa20.14■□□□□ 0.81
CHCHD3-204ENST00000457942 CSRNP1Q96S65 589 aa20.14■□□□□ 0.81
CHCHD3-204ENST00000457942 ZC3H12CQ9C0D7 883 aaKnown RBP20.14■□□□□ 0.81
CHCHD3-204ENST00000457942 GGA1Q9UJY5 639 aa20.14■□□□□ 0.81
CHCHD3-204ENST00000457942 RPS12P25398 132 aaKnown RBP20.13■□□□□ 0.81
CHCHD3-204ENST00000457942 CTSWP56202 376 aa20.13■□□□□ 0.81
CHCHD3-204ENST00000457942 FLIIQ13045 1269 aa20.13■□□□□ 0.81
CHCHD3-204ENST00000457942 FKBP5Q13451 457 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms