RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 VIL1P09327 827 aaKnown RBP17.28■□□□□ 0.36
SNHG17-208ENST00000456953 GPSM2P81274 684 aa17.28■□□□□ 0.36
SNHG17-208ENST00000456953 SF3B3Q15393 1217 aaKnown RBP17.28■□□□□ 0.36
SNHG17-208ENST00000456953 DOK7Q18PE1 504 aa17.28■□□□□ 0.36
SNHG17-208ENST00000456953 CELF1Q92879 486 aaKnown RBP17.28■□□□□ 0.36
SNHG17-208ENST00000456953 BABAM1Q9NWV8 329 aa17.28■□□□□ 0.36
SNHG17-208ENST00000456953 PAPPA2Q9BXP8 1791 aa17.28■□□□□ 0.36
SNHG17-208ENST00000456953 HTTP42858 3142 aa17.27■□□□□ 0.36
SNHG17-208ENST00000456953 ASTN2O75129 1339 aaPredicted RBP17.27■□□□□ 0.36
SNHG17-208ENST00000456953 MAPK8IP3Q9UPT6 1336 aa17.27■□□□□ 0.36
SNHG17-208ENST00000456953 ZNF280AP59817 542 aaPredicted RBP17.27■□□□□ 0.36
SNHG17-208ENST00000456953 TBC1D16Q8TBP0 767 aa17.27■□□□□ 0.36
SNHG17-208ENST00000456953 GCC1Q96CN9 775 aa17.27■□□□□ 0.36
SNHG17-208ENST00000456953 PNNQ9H307 717 aaKnown RBP17.27■□□□□ 0.36
SNHG17-208ENST00000456953 ZNF609O15014 1411 aa17.27■□□□□ 0.35
SNHG17-208ENST00000456953 ANGEL2Q5VTE6 544 aaKnown RBP17.26■□□□□ 0.35
SNHG17-208ENST00000456953 ZNF296Q8WUU4 475 aaPredicted RBP17.26■□□□□ 0.35
SNHG17-208ENST00000456953 ZC3H12CQ9C0D7 883 aaKnown RBP17.26■□□□□ 0.35
SNHG17-208ENST00000456953 SCARF1Q14162 830 aa17.25■□□□□ 0.35
SNHG17-208ENST00000456953 NOM1Q5C9Z4 860 aaKnown RBP17.25■□□□□ 0.35
SNHG17-208ENST00000456953 SCN9AQ15858 1988 aa17.25■□□□□ 0.35
SNHG17-208ENST00000456953 CENPFP49454 3210 aa17.25■□□□□ 0.35
SNHG17-208ENST00000456953 PITPNM2Q9BZ72 1349 aa17.24■□□□□ 0.35
SNHG17-208ENST00000456953 TBC1D8O95759 1140 aa17.24■□□□□ 0.35
SNHG17-208ENST00000456953 FBXO46Q6PJ61 603 aaPredicted RBP17.24■□□□□ 0.35
SNHG17-208ENST00000456953 AGBL3Q8NEM8 1001 aa17.24■□□□□ 0.35
SNHG17-208ENST00000456953 NECTIN2Q92692 538 aa17.24■□□□□ 0.35
SNHG17-208ENST00000456953 FAM89AQ96GI7 184 aa17.24■□□□□ 0.35
SNHG17-208ENST00000456953 G3V3G9 751 aa17.23■□□□□ 0.35
SNHG17-208ENST00000456953 RPS8P62241 208 aaKnown RBP17.23■□□□□ 0.35
SNHG17-208ENST00000456953 DCAF8Q5TAQ9 597 aa17.23■□□□□ 0.35
SNHG17-208ENST00000456953 RSBN1LQ6PCB5 846 aaPredicted RBP17.23■□□□□ 0.35
SNHG17-208ENST00000456953 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
SNHG17-208ENST00000456953 COL4A1P02462 1669 aa17.23■□□□□ 0.35
SNHG17-208ENST00000456953 PLBD2Q8NHP8 589 aa17.22■□□□□ 0.35
SNHG17-208ENST00000456953 ZNF428Q96B54 188 aa17.22■□□□□ 0.35
SNHG17-208ENST00000456953 ISCA1Q9BUE6 129 aa17.22■□□□□ 0.35
SNHG17-208ENST00000456953 GPR25O00155 361 aa17.21■□□□□ 0.35
SNHG17-208ENST00000456953 UFL1O94874 794 aa17.21■□□□□ 0.35
SNHG17-208ENST00000456953 USP17L8P0C7I0 530 aa17.21■□□□□ 0.35
SNHG17-208ENST00000456953 TM4SF4P48230 202 aa17.21■□□□□ 0.35
SNHG17-208ENST00000456953 UBE2Q2LH0YL09 131 aa17.2■□□□□ 0.34
SNHG17-208ENST00000456953 ANKRD13DQ6ZTN6 518 aa17.2■□□□□ 0.34
SNHG17-208ENST00000456953 MOB2Q70IA6 237 aa17.2■□□□□ 0.34
SNHG17-208ENST00000456953 GMLQ99445 158 aa17.2■□□□□ 0.34
SNHG17-208ENST00000456953 MYOZ2Q9NPC6 264 aa17.2■□□□□ 0.34
SNHG17-208ENST00000456953 CHPF2Q9P2E5 772 aa17.2■□□□□ 0.34
SNHG17-208ENST00000456953 ANKIB1Q9P2G1 1089 aa17.2■□□□□ 0.34
SNHG17-208ENST00000456953 GGA1Q9UJY5 639 aa17.2■□□□□ 0.34
SNHG17-208ENST00000456953 BRCA2P51587 3418 aa17.19■□□□□ 0.34
SNHG17-208ENST00000456953 ATP5J2-PTCD1G3V325 749 aa17.19■□□□□ 0.34
SNHG17-208ENST00000456953 IRS4O14654 1257 aaPredicted RBP17.19■□□□□ 0.34
SNHG17-208ENST00000456953 RIPK4P57078 832 aa17.19■□□□□ 0.34
SNHG17-208ENST00000456953 LMOD3Q0VAK6 560 aa17.19■□□□□ 0.34
SNHG17-208ENST00000456953 CFHR5Q9BXR6 569 aa17.19■□□□□ 0.34
SNHG17-208ENST00000456953 PSME4Q14997 1843 aa17.19■□□□□ 0.34
SNHG17-208ENST00000456953 FKTNO75072 461 aa17.18■□□□□ 0.34
SNHG17-208ENST00000456953 SREBF2Q12772 1141 aa17.18■□□□□ 0.34
SNHG17-208ENST00000456953 TRIM28Q13263 835 aaKnown RBP17.18■□□□□ 0.34
SNHG17-208ENST00000456953 RTL5Q5HYW3 569 aaPredicted RBP17.18■□□□□ 0.34
SNHG17-208ENST00000456953 HABP4Q5JVS0 413 aaKnown RBP17.18■□□□□ 0.34
SNHG17-208ENST00000456953 HSP90B1P14625 803 aaKnown RBP17.17■□□□□ 0.34
SNHG17-208ENST00000456953 TTLL12Q14166 644 aaPredicted RBP17.17■□□□□ 0.34
SNHG17-208ENST00000456953 USP17L3A6NCW0 530 aa17.16■□□□□ 0.34
SNHG17-208ENST00000456953 USP17L4A6NCW7 530 aa17.16■□□□□ 0.34
SNHG17-208ENST00000456953 NF2P35240 595 aa17.16■□□□□ 0.34
SNHG17-208ENST00000456953 KRT24Q2M2I5 525 aa17.16■□□□□ 0.34
SNHG17-208ENST00000456953 USP17L1Q7RTZ2 530 aa17.16■□□□□ 0.34
SNHG17-208ENST00000456953 DBF4Q9UBU7 674 aaPredicted RBP17.16■□□□□ 0.34
SNHG17-208ENST00000456953 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
SNHG17-208ENST00000456953 PRAMEF18Q5VWM3 479 aa17.15■□□□□ 0.34
SNHG17-208ENST00000456953 PODNQ7Z5L7 613 aa17.15■□□□□ 0.34
SNHG17-208ENST00000456953 SEC31BQ9NQW1 1179 aa17.15■□□□□ 0.34
SNHG17-208ENST00000456953 SCAF8Q9UPN6 1271 aaKnown RBP17.15■□□□□ 0.34
SNHG17-208ENST00000456953 CHL1O00533 1208 aa17.14■□□□□ 0.33
SNHG17-208ENST00000456953 HOXB7P09629 217 aa17.14■□□□□ 0.33
SNHG17-208ENST00000456953 TMPOP42166 694 aaKnown RBP17.14■□□□□ 0.33
SNHG17-208ENST00000456953 MKRN3Q13064 507 aaKnown RBP17.14■□□□□ 0.33
SNHG17-208ENST00000456953 NBPF9Q3BBW0 867 aa17.14■□□□□ 0.33
SNHG17-208ENST00000456953 ZBTB38Q8NAP3 1195 aaPredicted RBP17.14■□□□□ 0.33
SNHG17-208ENST00000456953 HYPKQ9NX55 129 aa17.14■□□□□ 0.33
SNHG17-208ENST00000456953 XDHP47989 1333 aa17.14■□□□□ 0.33
SNHG17-208ENST00000456953 ALDH1A1P00352 501 aa17.13■□□□□ 0.33
SNHG17-208ENST00000456953 CCDC152Q4G0S7 254 aa17.13■□□□□ 0.33
SNHG17-208ENST00000456953 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
SNHG17-208ENST00000456953 OGFOD1Q8N543 542 aa17.13■□□□□ 0.33
SNHG17-208ENST00000456953 R3HDMLQ9H3Y0 253 aa17.13■□□□□ 0.33
SNHG17-208ENST00000456953 ATP2B4P23634 1241 aa17.11■□□□□ 0.33
SNHG17-208ENST00000456953 PTPN12Q05209 780 aaKnown RBP17.11■□□□□ 0.33
SNHG17-208ENST00000456953 ARMC9Q7Z3E5 817 aa17.11■□□□□ 0.33
SNHG17-208ENST00000456953 WNT10BO00744 389 aa17.1■□□□□ 0.33
SNHG17-208ENST00000456953 MMP14P50281 582 aa17.1■□□□□ 0.33
SNHG17-208ENST00000456953 DACT2Q5SW24 774 aa17.1■□□□□ 0.33
SNHG17-208ENST00000456953 SPRYD7Q5W111 196 aa17.1■□□□□ 0.33
SNHG17-208ENST00000456953 TRIM17Q9Y577 477 aa17.1■□□□□ 0.33
SNHG17-208ENST00000456953 MYO3BQ8WXR4 1341 aa17.1■□□□□ 0.33
SNHG17-208ENST00000456953 KIAA0100Q14667 2235 aaKnown RBP17.09■□□□□ 0.33
SNHG17-208ENST00000456953 POTEFA5A3E0 1075 aa17.09■□□□□ 0.33
SNHG17-208ENST00000456953 INHBEP58166 350 aa17.09■□□□□ 0.33
SNHG17-208ENST00000456953 LDLRAD1Q5T700 205 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms