RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 ECE2O60344 883 aa15.51■□□□□ 0.07
LMCD1-206ENST00000456506 TBC1D10BQ4KMP7 808 aaPredicted RBP15.51■□□□□ 0.07
LMCD1-206ENST00000456506 DUSP27Q5VZP5 1158 aa15.51■□□□□ 0.07
LMCD1-206ENST00000456506 MBIPQ9NS73 344 aa15.51■□□□□ 0.07
LMCD1-206ENST00000456506 HYPKQ9NX55 129 aa15.51■□□□□ 0.07
LMCD1-206ENST00000456506 PODXL2Q9NZ53 605 aa15.51■□□□□ 0.07
LMCD1-206ENST00000456506 LAS1LQ9Y4W2 734 aaKnown RBP15.51■□□□□ 0.07
LMCD1-206ENST00000456506 ADM5C9JUS6 153 aa15.5■□□□□ 0.07
LMCD1-206ENST00000456506 IRS4O14654 1257 aaPredicted RBP15.5■□□□□ 0.07
LMCD1-206ENST00000456506 RPS12P25398 132 aaKnown RBP15.5■□□□□ 0.07
LMCD1-206ENST00000456506 DOK7Q18PE1 504 aa15.5■□□□□ 0.07
LMCD1-206ENST00000456506 MCOLN1Q9GZU1 580 aa15.5■□□□□ 0.07
LMCD1-206ENST00000456506 PHAXQ9H814 394 aaKnown RBP15.5■□□□□ 0.07
LMCD1-206ENST00000456506 SEC31BQ9NQW1 1179 aa15.5■□□□□ 0.07
LMCD1-206ENST00000456506 ASTN2O75129 1339 aaPredicted RBP15.49■□□□□ 0.07
LMCD1-206ENST00000456506 C6orf229H3BNL8 230 aa15.49■□□□□ 0.07
LMCD1-206ENST00000456506 VIL1P09327 827 aaKnown RBP15.49■□□□□ 0.07
LMCD1-206ENST00000456506 HUNKP57058 714 aa15.49■□□□□ 0.07
LMCD1-206ENST00000456506 RPS8P62241 208 aaKnown RBP15.49■□□□□ 0.07
LMCD1-206ENST00000456506 NOGQ13253 232 aa15.49■□□□□ 0.07
LMCD1-206ENST00000456506 RTL5Q5HYW3 569 aaPredicted RBP15.49■□□□□ 0.07
LMCD1-206ENST00000456506 CCDC85CA6NKD9 419 aa15.48■□□□□ 0.07
LMCD1-206ENST00000456506 SLC34A2O95436 690 aa15.48■□□□□ 0.07
LMCD1-206ENST00000456506 KRT26Q7Z3Y9 468 aa15.48■□□□□ 0.07
LMCD1-206ENST00000456506 ZBTB38Q8NAP3 1195 aaPredicted RBP15.48■□□□□ 0.07
LMCD1-206ENST00000456506 DDX10Q13206 875 aaKnown RBP15.47■□□□□ 0.07
LMCD1-206ENST00000456506 RGMBQ6NW40 437 aa15.47■□□□□ 0.07
LMCD1-206ENST00000456506 GMLQ99445 158 aa15.47■□□□□ 0.07
LMCD1-206ENST00000456506 EYA3Q99504 573 aa15.47■□□□□ 0.07
LMCD1-206ENST00000456506 GBA2Q9HCG7 927 aaPredicted RBP15.47■□□□□ 0.07
LMCD1-206ENST00000456506 ZNF280AP59817 542 aaPredicted RBP15.46■□□□□ 0.07
LMCD1-206ENST00000456506 KIF4BQ2VIQ3 1234 aa15.46■□□□□ 0.07
LMCD1-206ENST00000456506 PCCAP05165 728 aaPredicted RBP15.45■□□□□ 0.06
LMCD1-206ENST00000456506 MLLT1Q03111 559 aaPredicted RBP15.45■□□□□ 0.06
LMCD1-206ENST00000456506 CCDC191Q8NCU4 936 aa15.45■□□□□ 0.06
LMCD1-206ENST00000456506 SAGE1Q9NXZ1 904 aa15.45■□□□□ 0.06
LMCD1-206ENST00000456506 GGA3Q9NZ52 723 aa15.45■□□□□ 0.06
LMCD1-206ENST00000456506 WTIPA6NIX2 430 aaPredicted RBP15.44■□□□□ 0.06
LMCD1-206ENST00000456506 SLC10A3P09131 477 aa15.44■□□□□ 0.06
LMCD1-206ENST00000456506 KIF23Q02241 960 aaPredicted RBP15.44■□□□□ 0.06
LMCD1-206ENST00000456506 DGKZQ13574 1117 aa15.44■□□□□ 0.06
LMCD1-206ENST00000456506 WDR43Q15061 677 aaKnown RBP eCLIP15.44■□□□□ 0.06
LMCD1-206ENST00000456506 RBM26Q5T8P6 1007 aaKnown RBP15.44■□□□□ 0.06
LMCD1-206ENST00000456506 RIC3Q7Z5B4 369 aa15.44■□□□□ 0.06
LMCD1-206ENST00000456506 C8orf58Q8NAV2 365 aa15.44■□□□□ 0.06
LMCD1-206ENST00000456506 DCPSQ96C86 337 aaKnown RBP15.44■□□□□ 0.06
LMCD1-206ENST00000456506 CDCA5Q96FF9 252 aa15.44■□□□□ 0.06
LMCD1-206ENST00000456506 MYD88Q99836 296 aa15.44■□□□□ 0.06
LMCD1-206ENST00000456506 ZC3H12CQ9C0D7 883 aaKnown RBP15.44■□□□□ 0.06
LMCD1-206ENST00000456506 IFT57Q9NWB7 429 aa15.44■□□□□ 0.06
LMCD1-206ENST00000456506 PDE8AO60658 829 aa15.43■□□□□ 0.06
LMCD1-206ENST00000456506 UFL1O94874 794 aa15.43■□□□□ 0.06
LMCD1-206ENST00000456506 RSBN1LQ6PCB5 846 aaPredicted RBP15.43■□□□□ 0.06
LMCD1-206ENST00000456506 JARID2Q92833 1246 aaPredicted RBP15.43■□□□□ 0.06
LMCD1-206ENST00000456506 CCDC102AQ96A19 550 aa15.43■□□□□ 0.06
LMCD1-206ENST00000456506 APAF1O14727 1248 aa15.42■□□□□ 0.06
LMCD1-206ENST00000456506 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
LMCD1-206ENST00000456506 C2orf69Q8N8R5 385 aa15.42■□□□□ 0.06
LMCD1-206ENST00000456506 AGBL3Q8NEM8 1001 aa15.42■□□□□ 0.06
LMCD1-206ENST00000456506 CSRNP1Q96S65 589 aa15.42■□□□□ 0.06
LMCD1-206ENST00000456506 METTL22Q9BUU2 404 aaPredicted RBP15.42■□□□□ 0.06
LMCD1-206ENST00000456506 PRKRIP1Q9H875 184 aaPredicted RBP15.42■□□□□ 0.06
LMCD1-206ENST00000456506 RNF186Q9NXI6 227 aa15.42■□□□□ 0.06
LMCD1-206ENST00000456506 GGA1Q9UJY5 639 aa15.42■□□□□ 0.06
LMCD1-206ENST00000456506 ELL2O00472 640 aaPredicted RBP15.41■□□□□ 0.06
LMCD1-206ENST00000456506 IGKV5-2P06315 115 aa15.41■□□□□ 0.06
LMCD1-206ENST00000456506 ZNF157P51786 506 aaPredicted RBP15.41■□□□□ 0.06
LMCD1-206ENST00000456506 GNAI1P63096 354 aa15.41■□□□□ 0.06
LMCD1-206ENST00000456506 CCDC152Q4G0S7 254 aa15.41■□□□□ 0.06
LMCD1-206ENST00000456506 ANGEL2Q5VTE6 544 aaKnown RBP15.41■□□□□ 0.06
LMCD1-206ENST00000456506 RASAL3Q86YV0 1011 aa15.41■□□□□ 0.06
LMCD1-206ENST00000456506 CWC25Q9NXE8 425 aaPredicted RBP15.41■□□□□ 0.06
LMCD1-206ENST00000456506 XDHP47989 1333 aa15.41■□□□□ 0.06
LMCD1-206ENST00000456506 PITPNM2Q9BZ72 1349 aa15.41■□□□□ 0.06
LMCD1-206ENST00000456506 MED23Q9ULK4 1368 aa15.4■□□□□ 0.06
LMCD1-206ENST00000456506 SCARF1Q14162 830 aa15.4■□□□□ 0.06
LMCD1-206ENST00000456506 SULF1Q8IWU6 871 aa15.4■□□□□ 0.06
LMCD1-206ENST00000456506 TSPYL6Q8N831 410 aa15.4■□□□□ 0.06
LMCD1-206ENST00000456506 CCDC85AQ96PX6 553 aaPredicted RBP15.4■□□□□ 0.06
LMCD1-206ENST00000456506 ANKIB1Q9P2G1 1089 aa15.4■□□□□ 0.06
LMCD1-206ENST00000456506 ARAP2Q8WZ64 1704 aa15.4■□□□□ 0.06
LMCD1-206ENST00000456506 PDE4DIPQ5VU43 2346 aa15.39■□□□□ 0.05
LMCD1-206ENST00000456506 OTOFQ9HC10 1997 aa15.39■□□□□ 0.05
LMCD1-206ENST00000456506 MYOZ2Q9NPC6 264 aa15.39■□□□□ 0.05
LMCD1-206ENST00000456506 TRPA1O75762 1119 aa15.38■□□□□ 0.05
LMCD1-206ENST00000456506 USP17L8P0C7I0 530 aa15.38■□□□□ 0.05
LMCD1-206ENST00000456506 HSP90B1P14625 803 aaKnown RBP15.38■□□□□ 0.05
LMCD1-206ENST00000456506 ATP2B4P23634 1241 aa15.38■□□□□ 0.05
LMCD1-206ENST00000456506 CTSWP56202 376 aa15.38■□□□□ 0.05
LMCD1-206ENST00000456506 PODNQ7Z5L7 613 aa15.38■□□□□ 0.05
LMCD1-206ENST00000456506 TTLL11Q8NHH1 800 aa15.38■□□□□ 0.05
LMCD1-206ENST00000456506 SCAF8Q9UPN6 1271 aaKnown RBP15.38■□□□□ 0.05
LMCD1-206ENST00000456506 MAP3K2Q9Y2U5 619 aa15.38■□□□□ 0.05
LMCD1-206ENST00000456506 RBBP6Q7Z6E9 1792 aaKnown RBP15.38■□□□□ 0.05
LMCD1-206ENST00000456506 USP17L3A6NCW0 530 aa15.37■□□□□ 0.05
LMCD1-206ENST00000456506 USP17L4A6NCW7 530 aa15.37■□□□□ 0.05
LMCD1-206ENST00000456506 FKBP1BP68106 108 aa15.37■□□□□ 0.05
LMCD1-206ENST00000456506 DACT2Q5SW24 774 aa15.37■□□□□ 0.05
LMCD1-206ENST00000456506 MOB2Q70IA6 237 aa15.37■□□□□ 0.05
LMCD1-206ENST00000456506 USP17L1Q7RTZ2 530 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms